Data search
Results for MligTC455_46388
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46388 | 189 | 3.94 | Mlig455_033949 | Neo: - Age: - |
Mlig455_033949 {REF} {Length: 4968} {RNA1509_25010} {RNA1310_26019} {RNA815_19131} |
Cumulative graph for MligTC455_46388
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.33 | 2.45 | 0.11790 | 0.70722 | |
| RegionR2 | 1.769 | 2.45 | 0.06347 | 0.30459 | |
| RegionR3 | 1.302 | 2.45 | 0.11756 | 0.59425 | |
| RegionR4 | 0.22 | 2.45 | 0.76796 | 1.00000 | |
| RegionR5 | -0.742 | 2.45 | 0.97645 | 1.00000 | |
| RegionR6 | 0.622 | 2.45 | 0.53411 | 1.00000 | |
| RegionR7 | 1.375 | 2.45 | 0.17437 | 0.76695 | |
| RegionR8 | 1.785 | 2.45 | 0.09164 | 0.57187 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.605 | 2.45 | 0.99993 | 1.00000 | |
| RegenerationR2 | -0.326 | 2.45 | 0.58769 | 0.90994 | |
| RegenerationR3 | 0.011 | 2.45 | 0.98214 | 1.00000 | |
| RegenerationR4 | 0.684 | 2.45 | 0.34166 | 0.77281 | |
| RegenerationR5 | 1.308 | 2.45 | 0.07162 | 0.42008 | |
| RegenerationR6 | 0.48 | 2.45 | 0.51953 | 0.82029 | |
| RegenerationBL | 0.476 | 2.45 | 0.53668 | 0.89616 | |
| RegenerationTP | -0.39 | 2.45 | 0.65949 | 0.99354 |
Genes with expression patterns similar to MligTC455_46388
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46388 | 189 | 3.94 | Mlig455_033949 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_033949 {REF} {Length: 4968} {RNA1509_25010} {RNA1310_26019} {RNA815_19131} | |
| 2. | MligTC455_33356 | 149 | 3.11 | Mlig455_025778 | Neo: - Age: - |
SP4 | 1.874 | - | - | 0.951 | 0.923 | - | - | Mlig455_025778 {REF} {Length: 2800} {Pfam: Zinc-finger double domain [PF13465.8, score=45.8]; Zinc finger, C2H2 type [PF00096.28, score=44.8]; C2H2-type zinc finger [PF13894.8, score=29.7]} {Human: ENSG00000105866, SP4, Sp4 transcription factor, [RH, Score=186, Expect=2e-52]; ENSG00000185591, SP1, Sp1 transcription factor, [RH, Score=180, Expect=5e-50]} {Mouse: ENSMUSG00000025323, Sp4, trans-acting transcription factor 4, [RH, Score=190, Expect=6e-54]} {Dmel: FBgn0039169, Spps, Sp1-like factor for pairing sensitive-silencing, [RH, Score=174, Expect=4e-48]} {Celegans: WBGene00012735, sptf-3, SP (Specificity Protein) Transcription Factor, [RH, Score=155, Expect=1e-43]} {Smed: dd_Smed_v6_7824_0_1, dd_Smed_v6_7824_0_1, [RH, Score=171, Expect=1e-49]} {RNA1509_53494} {RNA1310_27619} {RNA815_23917} |
| 3. | MligTC455_36085 | 165 | 3.44 | Mlig455_043517, Mlig455_052478 | Neo: - Age: - Region-enriched R2: 4.331/0.04635 |
1.735 | - | - | 0.770 | 0.965 | - | - | Mlig455_043517 {REF} {Length: 3078} {NoTransDecoderORF} {RNA1509_43957} {RNA1310_14043} {RNA815_37878} Mlig455_052478 {REF} {Length: 617} {NoTransDecoderORF} {RNA1509_43957} {RNA1310_64561} {RNA815_37878} |
|
| 4. | MligTC455_37168 | 752 | 15.67 | Mlig455_032391 | Neo: - Age: Up-Down-Up Region-enriched R5: 1.708/0.00065 Regeneration-upregulated BL: 2.288 Regeneration-enriched BL: 2.288 |
CIC | 0.975 | - | - | - | 0.975 | - | - | Mlig455_032391 {REF} {Length: 2915} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4819) [PF16090.7, score=43.4]} {Human: ENSG00000079432, CIC, capicua transcriptional repressor, [RH, Score=108, Expect=1e-23]} {Mouse: ENSMUSG00000005442, Cic, capicua transcriptional repressor, [RH, Score=105, Expect=1e-22]} {Dmel: FBgn0262582, cic, capicua, [Score=90.5, Expect=3e-18]} {Celegans: WBGene00001560, gei-3, GEX Interacting protein, [RH, Score=103, Expect=2e-22]} {Smed: dd_Smed_v6_4601_0_1, dd_Smed_v6_4601_0_1, [RH, Score=101, Expect=8e-22]} {RNA1509_30705} {RNA1310_5821, RNA1509_30705} {RNA1509_30705, RNA815_6450} |
| 5. | MligTC455_47663 | 596 | 12.43 | Mlig455_021670, Mlig455_021718 | Neo: - Age: - |
PCDH11X | 0.967 | - | - | - | 0.967 | - | - | Mlig455_021670 {REF} {Length: 3779} {Pfam: Cadherin domain [PF00028.19, score=254.9]; Cadherin-like [PF08266.14, score=48.8]; Cadherin-like [PF16184.7, score=19.2]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=259, Expect=2e-70]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=259, Expect=2e-70]; ENSG00000156453, PCDH1, protocadherin 1, [Score=251, Expect=2e-68]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=254, Expect=2e-69]} {Dmel: FBgn0284247, ds, dachsous, [Score=229, Expect=1e-60]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=157, Expect=3e-38]} {Smed: dd_Smed_v6_11605_0_1, dd_Smed_v6_11605_0_1, [RH, Score=333, Expect=6e-97]} {RNA1509_22718} {RNA1310_3245} {RNA815_7122} Mlig455_021718 {REF} {Length: 3958} {Pfam: Cadherin domain [PF00028.19, score=259.1]; Cadherin-like [PF08266.14, score=51.8]; Cadherin-like [PF16184.7, score=21.2]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=259, Expect=1e-71]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=258, Expect=5e-72]; ENSG00000156453, PCDH1, protocadherin 1, [Score=251, Expect=7e-70]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=256, Expect=1e-71]} {Dmel: FBgn0284247, ds, dachsous, [Score=231, Expect=1e-62]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=155, Expect=2e-38]} {Smed: dd_Smed_v6_13155_0_1, dd_Smed_v6_13155_0_1, [RH, Score=318, Expect=1e-94]} {RNA1509_22718} {RNA1310_3245} {RNA815_7122} |
| 6. | MligTC455_35350 | 247 | 5.15 | Mlig455_056934 | Neo: - Age: - |
0.965 | - | - | - | 0.965 | - | - | Mlig455_056934 {REF} {Length: 2367} {RNA1509_32038, RNA1509_38293, RNA1509_52777, RNA1509_57104} {RNA1310_48257.2, RNA1509_32038, RNA1509_38293, RNA1509_52777, RNA1509_57104} {RNA1509_32038, RNA1509_38293, RNA1509_52777, RNA1509_57104, RNA815_15744} | |
| 7. | MligTC455_15016 | 70 | 1.45 | Mlig455_030543 | Neo: - Age: - |
LHX3 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_030543 {REF} {Length: 2024} {Pfam: LIM domain [PF00412.24, score=113.8]; Homeodomain [PF00046.31, score=69.9]; Homeobox KN domain [PF05920.13, score=20.4]} {Human: ENSG00000107187, LHX3, LIM homeobox 3, [RH, Score=319, Expect=6e-106]; ENSG00000121454, LHX4, LIM homeobox 4, [RH, Score=311, Expect=1e-102]} {Mouse: ENSMUSG00000026934, Lhx3, LIM homeobox protein 3, [RH, Score=319, Expect=8e-106]; ENSMUSG00000026468, Lhx4, LIM homeobox protein 4, [RH, Score=311, Expect=6e-103]} {Dmel: FBgn0002023, Lim3, [RH, Score=323, Expect=5e-106]} {Celegans: WBGene00000438, ceh-14, Homeobox protein ceh-14, [RH, Score=267, Expect=2e-86]} {Smed: dd_Smed_v6_20755_0_1, dd_Smed_v6_20755_0_1, [RH, Score=328, Expect=3e-111]} {RNA1310_33977} {RNA815_27636} |
| 8. | MligTC455_44746 | 183 | 3.82 | Mlig455_034151 | Neo: - Age: - |
EMC4 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_034151 {REF} {Length: 2005} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1077) [PF06417.14, score=144.5]} {Human: ENSG00000128463, EMC4, ER membrane protein complex subunit 4, [RH, Score=181, Expect=1e-57]} {Mouse: ENSMUSG00000027131, Emc4, ER membrane protein complex subunit 4, [RH, Score=181, Expect=7e-58]} {Dmel: FBgn0037199, CG11137, [RH, Score=160, Expect=5e-50]} {Celegans: WBGene00022776, perm-3, PERMeable eggshell, [RH, Score=128, Expect=1e-37]} {Smed: dd_Smed_v6_2285_0_1, dd_Smed_v6_2285_0_1, [RH, Score=200, Expect=1e-65]} {RNA1509_47598, RNA1509_56137} {RNA1310_27875, RNA1509_47598} {RNA1509_47598, RNA815_15318} |
| 9. | MligTC455_46007 | 1095 | 22.82 | Mlig455_015551 | Neo: - Age: - Regeneration-upregulated BL: 1.762 Regeneration-enriched BL: 1.762 |
RBMS3 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_015551 {REF} {Length: 2417} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.0]} {Human: ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [RH, Score=114, Expect=3e-27]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [RH, Score=112, Expect=1e-26]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [RH, Score=115, Expect=8e-28]; ENSMUSG00000039607, Rbms3, RNA binding motif, single stranded interacting protein, [RH, Score=113, Expect=5e-27]} {Dmel: FBgn0052423, shep, alan shepard, [Score=100, Expect=4e-22]} {Celegans: WBGene00006331, sup-26, SUPpressor, [RH, Score=118, Expect=9e-29]} {Smed: dd_Smed_v6_2612_0_1, dd_Smed_v6_2612_0_1, [RH, Score=109, Expect=2e-25]} {RNA1509_18229} {RNA1310_2231} {RNA815_12809} |
| 10. | MligTC455_48339 | 41 | 0.86 | Mlig455_059499 | Neo: - Age: - Region-enriched R2: 7.250/0.00036 |
0.957 | - | - | 0.957 | - | - | - | Mlig455_059499 {REF} {Length: 1387} {Pfam: Protein of unknown function (DUF4532) [PF15046.8, score=28.4]} {Mouse: ENSMUSG00000079304, Tex52, testis expressed 52, [Score=48.1, Expect=6e-06]} {RNA1310_54208} {RNA815_57875} | |
| 11. | MligTC455_45007 | 83 | 1.74 | Mlig455_000143 | Neo: Irradiation Age: - |
FANK1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_000143 {REF} {Length: 1149} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=32.3]; Ankyrin repeats (3 copies) [PF12796.9, score=29.1]; Ankyrin repeats (many copies) [PF13637.8, score=28.5]; Ankyrin repeat [PF13606.8, score=25.9]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=46.6, Expect=2e-06]; ENSG00000115239, ASB3, ankyrin repeat and SOCS box containing 3, [Score=44.7, Expect=1e-05]; ENSG00000151150, ANK3, ankyrin 3, [Score=44.7, Expect=1e-05]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=49.7, Expect=2e-07]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=47.4, Expect=9e-07]} {Smed: dd_Smed_v6_2366_0_1, dd_Smed_v6_2366_0_1, [Score=43.5, Expect=9e-06]} {RNA1509_47054} {RNA1310_54258, RNA1509_47054} {RNA1509_47054, RNA815_50469} |
| 12. | MligTC455_40242 | 87 | 1.8 | Mlig455_064860 | Neo: - Age: - |
0.955 | - | - | 0.955 | - | - | - | Mlig455_064860 {REF} {Length: 3649} {RNA1509_7433} {RNA1310_28587} {RNA815_31194} | |
| 13. | MligTC455_18091 | 71 | 1.49 | Mlig455_014664 | Neo: - Age: - |
ARL3 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_014664 {REF} {Length: 1771} {Pfam: ADP-ribosylation factor family [PF00025.23, score=67.3]; 50S ribosome-binding GTPase [PF01926.25, score=26.6]; G-protein alpha subunit [PF00503.22, score=19.1]} {Human: ENSG00000138175, ARL3, ADP ribosylation factor like GTPase 3, [Score=67.8, Expect=2e-13]; ENSG00000122644, ARL4A, ADP ribosylation factor like GTPase 4A, [Score=67.8, Expect=3e-13]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=65.1, Expect=2e-12]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=65.1, Expect=2e-12]; ENSG00000188042, ARL4C, ADP ribosylation factor like GTPase 4C, [Score=64.7, Expect=4e-12]} {Mouse: ENSMUSG00000047446, Arl4a, ADP-ribosylation factor-like 4A, [Score=67.4, Expect=2e-13]; ENSMUSG00000025035, Arl3, ADP-ribosylation factor-like 3, [Score=66.6, Expect=4e-13]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=65.1, Expect=1e-12]; ENSMUSG00000049866, Arl4c, ADP-ribosylation factor-like 4C, [Score=64.3, Expect=3e-12]} {Dmel: FBgn0013749, Arf102F, ADP ribosylation factor at 102F, [Score=66.6, Expect=3e-13]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=65.5, Expect=5e-13]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=78.6, Expect=7e-18]} {RNA1310_41790} {RNA815_35492} |
| 14. | MligTC455_48028 | 185 | 3.85 | Mlig455_007274 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 4.108 Regeneration-enriched BL: 4.108 |
SPSB4 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_007274 {REF} {Length: 2130} {Human: ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=104, Expect=7e-27]; ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=103, Expect=4e-27]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=103, Expect=2e-27]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=103, Expect=1e-26]} {Dmel: FBgn0026238, gus, gustavus, [Score=107, Expect=5e-28]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [Score=94.7, Expect=5e-23]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [Score=77.0, Expect=8e-17]} {RNA1509_16638} {RNA1310_11847} {RNA815_5105} |
| 15. | MligTC455_39026 | 511 | 10.64 | Mlig455_042705 | Neo: - Age: - |
DVL3 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_042705 {REF} {Length: 4985} {Pfam: DIX domain [PF00778.19, score=105.4]; Dishevelled specific domain [PF02377.17, score=87.9]; PDZ domain [PF00595.26, score=62.1]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=58.7]; PDZ domain [PF17820.3, score=28.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=18.8]} {Human: ENSG00000161202, DVL3, dishevelled segment polarity protein 3, [RH, Score=448, Expect=4e-147]} {Mouse: ENSMUSG00000003233, Dvl3, dishevelled segment polarity protein 3, [RH, Score=447, Expect=7e-147]} {Dmel: FBgn0000499, dsh, dishevelled, [RH, Score=286, Expect=2e-86]} {Celegans: WBGene00001101, dsh-1, DiSHevelled related, [RH, Score=297, Expect=5e-90]} {Smed: dd_Smed_v6_8730_0_1, dd_Smed_v6_8730_0_1, [Score=551, Expect=0.0]} {RNA1509_41565, RNA1509_54403, RNA1509_56007} {RNA1310_10157, RNA1509_41565, RNA1509_54403, RNA1509_56007} {RNA1509_41565, RNA1509_54403, RNA1509_56007, RNA815_18953} |
| 16. | MligTC455_42773 | 200 | 4.16 | Mlig455_029337 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_029337 {REF} {Length: 1557} {TRANSSPLICED} {RNA1509_52444} {RNA1310_41405.1} {RNA815_43751} |
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