Data search
Results for MligTC455_46407
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46407 | 2107 | 43.89 | Mlig455_059686 | Neo: - Age: - Region-enriched R2: 1.060/0.02753 |
ABCC1 | Mlig455_059686 {REF} {Length: 6367} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=254.0]; ABC transporter [PF00005.29, score=170.4]; RecF/RecN/SMC N terminal domain [PF02463.21, score=42.8]; AAA ATPase domain [PF13191.8, score=22.7]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; P-loop containing region of AAA domain [PF13555.8, score=18.8]} {Human: ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [RH, Score=1398, Expect=0.0]; ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [RH, Score=1398, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [RH, Score=1404, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [RH, Score=1408, Expect=0.0]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [RH, Score=1218, Expect=0.0]} {Smed: dd_Smed_v6_3982_0_1, dd_Smed_v6_3982_0_1, [Score=1326, Expect=0.0]} {RNA1509_3152, RNA1509_40785} {RNA1310_506.1, RNA1509_3152, RNA1509_40785} {RNA1509_3152, RNA1509_40785, RNA815_173.1} |
Cumulative graph for MligTC455_46407
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.348 | 5.636 | 0.08530 | 0.63512 | |
| RegionR2 | 1.06 | 5.636 | 0.00140 | 0.02753 | |
| RegionR3 | 0.056 | 5.636 | 0.84993 | 1.00000 | |
| RegionR4 | -0.071 | 5.636 | 0.83883 | 1.00000 | |
| RegionR5 | -0.223 | 5.636 | 0.42510 | 0.78526 | |
| RegionR6 | 0.154 | 5.636 | 0.59129 | 1.00000 | |
| RegionR7 | 0.217 | 5.636 | 0.51096 | 1.00000 | |
| RegionR8 | 0.155 | 5.636 | 0.68578 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.813 | 5.636 | 0.45510 | 1.00000 | |
| RegenerationR2 | -0.013 | 5.636 | 0.96879 | 1.00000 | |
| RegenerationR3 | 0.005 | 5.636 | 0.98962 | 1.00000 | |
| RegenerationR4 | 0.129 | 5.636 | 0.71902 | 0.96101 | |
| RegenerationR5 | -0.026 | 5.636 | 0.93710 | 1.00000 | |
| RegenerationR6 | -0.294 | 5.636 | 0.40596 | 0.74154 | |
| RegenerationBL | 0.07 | 5.636 | 0.84292 | 1.00000 | |
| RegenerationTP | 0.244 | 5.636 | 0.51680 | 0.91191 |
Genes with expression patterns similar to MligTC455_46407
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46407 | 2107 | 43.89 | Mlig455_059686 | Neo: - Age: - Region-enriched R2: 1.060/0.02753 |
ABCC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059686 {REF} {Length: 6367} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=254.0]; ABC transporter [PF00005.29, score=170.4]; RecF/RecN/SMC N terminal domain [PF02463.21, score=42.8]; AAA ATPase domain [PF13191.8, score=22.7]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; P-loop containing region of AAA domain [PF13555.8, score=18.8]} {Human: ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [RH, Score=1398, Expect=0.0]; ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [RH, Score=1398, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [RH, Score=1404, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [RH, Score=1408, Expect=0.0]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [RH, Score=1218, Expect=0.0]} {Smed: dd_Smed_v6_3982_0_1, dd_Smed_v6_3982_0_1, [Score=1326, Expect=0.0]} {RNA1509_3152, RNA1509_40785} {RNA1310_506.1, RNA1509_3152, RNA1509_40785} {RNA1509_3152, RNA1509_40785, RNA815_173.1} |
| 2. | MligTC455_46406 | 1601 | 33.36 | Mlig455_015926 | Neo: - |
ABCC1 | 3.36 | - | 0.818 | 0.810 | 0.959 | 0.773 | - | Mlig455_015926 {REF} {Length: 6357} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=254.2]; ABC transporter [PF00005.29, score=170.5]; RecF/RecN/SMC N terminal domain [PF02463.21, score=42.8]; AAA ATPase domain [PF13191.8, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; P-loop containing region of AAA domain [PF13555.8, score=18.8]} {Human: ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [RH, Score=1399, Expect=0.0]; ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [RH, Score=1399, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [RH, Score=1407, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [RH, Score=1405, Expect=0.0]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [RH, Score=1217, Expect=0.0]} {Smed: dd_Smed_v6_6609_0_1, dd_Smed_v6_6609_0_1, [Score=1292, Expect=0.0]} {RNA1509_3152, RNA1509_49036} {RNA1310_506.1, RNA1509_49036} {RNA1509_49036, RNA815_173.1} |
| 3. | MligTC455_40489 | 3814 | 79.46 | Mlig455_034553, Mlig455_041490 | Neo: - Age: Up-Up-Down |
3.17 | - | 0.713 | - | 0.969 | 0.751 | 0.737 | Mlig455_034553 {REF} {Length: 3759} {tRNA: Val(CAC),pseudo, score=28.2} {RNA1509_20260, RNA1509_39825, RNA1509_45069, RNA1509_9071} {RNA1310_21936, RNA1509_20260, RNA1509_39825, RNA1509_45069, RNA1509_9071} {RNA1509_20260, RNA1509_39825, RNA1509_45069, RNA1509_9071, RNA815_6140} Mlig455_041490 {REF} {Length: 4332} {tRNA: Val(CAC),pseudo, score=28.2} {RNA1509_48316} {RNA1310_21936} {RNA815_6140} |
|
| 4. | MligTC455_49614 | 692 | 14.42 | Mlig455_008153 | Neo: - Age: logFC(26M/2M)=-0.516 |
2.451 | - | - | 0.789 | 0.958 | - | 0.704 | Mlig455_008153 {REF} {Length: 2957} {Dmel: FBgn0053519, Unc-89, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_12629_0_1, dd_Smed_v6_12629_0_1, [RH, Score=220, Expect=1e-62]} {RNA1509_10730, RNA1509_23712} {RNA1310_6069.1, RNA1509_10730, RNA1509_23712} {RNA1509_10730, RNA1509_23712, RNA815_6292.1} | |
| 5. | MligTC455_18603 | 3778 | 78.7 | Mlig455_050242 | Neo: - Age: - |
CCDC39 | 2.441 | - | - | 0.721 | 0.952 | - | 0.768 | Mlig455_050242 {REF} {Length: 3281} {Human: ENSG00000284862, CCDC39, coiled-coil domain containing 39, [RH, Score=698, Expect=0.0]} {Mouse: ENSMUSG00000027676, Ccdc39, coiled-coil domain containing 39, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0037276, CG17387, [RH, Score=157, Expect=4e-39]} {Smed: dd_Smed_v6_5955_0_1, dd_Smed_v6_5955_0_1, [RH, Score=779, Expect=0.0]} {RNA1509_738} {RNA1310_4021} {RNA815_1219} |
| 6. | MligTC455_18481 | 1416 | 29.5 | Mlig455_061762 | Neo: - Age: Down-Down-Up Region-enriched R2: 1.816/0.04103 |
IFT88 | 1.81 | - | - | - | 0.959 | - | 0.851 | Mlig455_061762 {REF} {Length: 3149} {Pfam: Tetratricopeptide repeat [PF07719.19, score=111.4]; Tetratricopeptide repeat [PF00515.30, score=99.7]; Tetratricopeptide repeat [PF13424.8, score=98.0]; Tetratricopeptide repeat [PF13181.8, score=76.4]; Tetratricopeptide repeat [PF14559.8, score=73.3]; Tetratricopeptide repeat [PF13174.8, score=71.7]; Tetratricopeptide repeat [PF13432.8, score=71.0]; Tetratricopeptide repeat [PF13428.8, score=70.9]; Tetratricopeptide repeat [PF13176.8, score=61.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=56.3]; TPR repeat [PF13414.8, score=50.2]; Tetratricopeptide repeat [PF13371.8, score=40.4]; Tetratricopeptide repeat [PF13374.8, score=31.9]; Tetratricopeptide repeat-like domain [PF09976.11, score=28.6]; Tetratricopeptide repeat [PF13431.8, score=22.0]; MalT-like TPR region [PF17874.3, score=21.7]} {Human: ENSG00000032742, IFT88, intraflagellar transport 88, [RH, Score=867, Expect=0.0]} {Mouse: ENSMUSG00000040040, Ift88, intraflagellar transport 88, [RH, Score=908, Expect=0.0]} {Dmel: FBgn0016919, nompB, no mechanoreceptor potential B, [RH, Score=349, Expect=1e-107]} {Celegans: WBGene00003885, osm-5, OSM-5, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_5484_0_1, dd_Smed_v6_5484_0_1, [RH, Score=976, Expect=0.0]} {RNA1509_34996, RNA1509_4056} {RNA1310_1829, RNA1509_34996, RNA1509_4056} {RNA1509_34996, RNA1509_4056, RNA815_705} |
| 7. | MligTC455_22713 | 787 | 16.4 | Mlig455_023280 | Neo: - Age: - |
1.752 | - | - | 0.776 | 0.976 | - | - | Mlig455_023280 {REF} {Length: 2898} {RNA1509_17376} {RNA1310_6954} {RNA815_8376.1} | |
| 8. | MligTC455_25534 | 310 | 6.46 | Mlig455_000181 | Neo: - Age: logFC(26M/2M)=-0.492 |
1.704 | 0.728 | - | - | 0.976 | - | - | Mlig455_000181 {REF} {Length: 1867} {TRANSSPLICED} {Pfam: Lectin C-type domain [PF00059.23, score=32.2]} {RNA1509_57829} {RNA1310_16312, RNA1509_57829} {RNA1509_57829, RNA815_15052} | |
| 9. | MligTC455_24027 | 2372 | 49.42 | Mlig455_024046 | Neo: - Age: - |
DMBT1 | 1.671 | 0.705 | - | - | 0.966 | - | - | Mlig455_024046 {REF} {Length: 2875} {Pfam: Zona pellucida-like domain [PF00100.25, score=87.7]; Scavenger receptor cysteine-rich domain [PF00530.20, score=64.8]} {Human: ENSG00000187908, DMBT1, deleted in malignant brain tumors 1, [Score=60.8, Expect=1e-08]} {Celegans: WBGene00015646, mlt-10, [Score=161, Expect=3e-41]} {Smed: dd_Smed_v6_8185_0_1, dd_Smed_v6_8185_0_1, [Score=72.4, Expect=4e-13]} {RNA1509_6352} {RNA1310_8273} {RNA815_2734} |
| 10. | MligTC455_33599 | 990 | 20.63 | Mlig455_059026 | Neo: - |
CPLANE1 | 1.664 | - | - | - | 0.958 | 0.706 | - | Mlig455_059026 {REF} {Length: 10323} {TRANSSPLICED} {Pfam: Joubert syndrome-associated [PF15392.8, score=19.1]} {Human: ENSG00000197603, CPLANE1, ciliogenesis and planar polarity effector 1, [RH, Score=136, Expect=6e-31]} {Mouse: ENSMUSG00000039801, Cplane1, ciliogenesis and planar polarity effector 1, [RH, Score=138, Expect=1e-31]} {RNA1509_1312, RNA1509_13367, RNA1509_16834, RNA1509_24724} {RNA1310_343.1, RNA1509_1312, RNA1509_13367, RNA1509_16834, RNA1509_24724} {RNA1509_1312, RNA1509_13367, RNA1509_16834, RNA1509_24724, RNA815_482.1} |
| 11. | MligTC455_43972 | 1061 | 22.11 | Mlig455_047704 | Neo: - Age: - |
1.662 | - | - | - | 0.959 | - | 0.703 | Mlig455_047704 {REF} {Length: 2155} {TRANSSPLICED} {RNA1509_7618} {RNA1310_9007} {RNA815_27926.1} | |
| 12. | MligTC455_43971 | 1049 | 21.85 | Mlig455_014401 | Neo: - Age: logFC(26M/2M)=-0.330 |
NEK1 | 1.654 | - | 0.702 | - | 0.952 | - | - | Mlig455_014401 {REF} {Length: 2439} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=118.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=68.0]; Kinase-like [PF14531.8, score=20.7]} {Human: ENSG00000137601, NEK1, NIMA related kinase 1, [Score=111, Expect=1e-24]} {Mouse: ENSMUSG00000049897, Stkld1, serine/threonine kinase-like domain containing 1, [RH, Score=142, Expect=3e-35]} {Dmel: FBgn0029970, Nek2, [Score=68.9, Expect=8e-12]} {Celegans: WBGene00021461, nekl-1, NEK (NEver in mitosis Kinase) Like, [Score=89.4, Expect=3e-18]} {Smed: dd_Smed_v6_10144_0_2, dd_Smed_v6_10144_0_2, [Score=100, Expect=7e-22]} {RNA1509_7618} {RNA1310_9007, RNA1509_7618} {RNA1509_7618, RNA815_6823} |
| 13. | MligTC455_15810 | 1023 | 21.32 | Mlig455_039929 | Neo: Irradiation Age: - Region-enriched R4: 1.741/0.00021 |
PAQR3 | 0.977 | - | - | - | 0.977 | - | - | Mlig455_039929 {REF} {Length: 1545} {TRANSSPLICED} {Pfam: Haemolysin-III related [PF03006.22, score=138.1]} {Human: ENSG00000163291, PAQR3, progestin and adipoQ receptor family member 3, [RH, Score=230, Expect=4e-73]} {Mouse: ENSMUSG00000055725, Paqr3, progestin and adipoQ receptor family member III, [RH, Score=228, Expect=2e-72]} {Dmel: FBgn0038256, CG7530, [RH, Score=184, Expect=4e-55]} {Celegans: WBGene00013457, paqr-3, Progestin and AdipoQ Receptor family, [RH, Score=169, Expect=2e-49]} {Smed: dd_Smed_v6_10397_0_1, dd_Smed_v6_10397_0_1, [RH, Score=258, Expect=1e-84]} {RNA1509_31955} {RNA1310_5306} {RNA815_8277} |
| 14. | MligTC455_54146 | 1239 | 25.82 | Mlig455_049378 | Neo: - |
DRC7 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_049378 {REF} {Length: 3401} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=19.6]} {Human: ENSG00000159625, DRC7, dynein regulatory complex subunit 7, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000031786, Drc7, dynein regulatory complex subunit 7, [RH, Score=728, Expect=0.0]} {Dmel: FBgn0083946, lobo, lost boys, [RH, Score=280, Expect=4e-80]} {Smed: dd_Smed_v6_12588_0_1, dd_Smed_v6_12588_0_1, [RH, Score=708, Expect=0.0]} {RNA1509_1230} {RNA1310_4483} {RNA815_1294} |
| 15. | MligTC455_43109 | 491 | 10.23 | Mlig455_029599 | Neo: - Age: - |
ARRDC2 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_029599 {REF} {Length: 1947} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=67.4]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=58.1]} {Human: ENSG00000105643, ARRDC2, arrestin domain containing 2, [Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000110906, Arrdc2, arrestin domain containing 2, [Score=97.1, Expect=8e-22]; ENSMUSG00000002910, Arrdc2, arrestin domain containing 2, [Score=97.1, Expect=8e-22]} {Dmel: FBgn0035103, Vdup1, Vitamin D[[3]] up-regulated protein 1, [Score=90.5, Expect=5e-20]} {Celegans: WBGene00011732, arrd-17, Arrestin domain-containing protein 17, [Score=84.3, Expect=1e-17]} {Smed: dd_Smed_v6_8715_0_1, dd_Smed_v6_8715_0_1, [Score=55.8, Expect=2e-08]} {RNA1509_45476} {RNA1310_16251} {RNA815_9075} |
| 16. | MligTC455_49237 | 1147 | 23.89 | Mlig455_053089 | Neo: - Age: Down-Up-Down |
CAMK4 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_053089 {REF} {Length: 2761} {Pfam: Protein kinase domain [PF00069.27, score=263.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=117.6]; Fungal protein kinase [PF17667.3, score=24.4]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000152495, CAMK4, calcium/calmodulin dependent protein kinase IV, [Score=351, Expect=4e-118]} {Mouse: ENSMUSG00000038128, Camk4, calcium/calmodulin-dependent protein kinase IV, [Score=353, Expect=3e-119]} {Dmel: FBgn0016126, CaMKI, Calcium/calmodulin-dependent protein kinase I, [Score=248, Expect=2e-79]} {Celegans: WBGene00000553, cmk-1, Calcium/calmodulin-dependent protein kinase type 1, [Score=245, Expect=8e-79]} {Smed: dd_Smed_v6_10731_0_1, dd_Smed_v6_10731_0_1, [Score=357, Expect=1e-122]} {RNA1509_27017, RNA1509_8403} {RNA1310_11195.2, RNA1509_27017, RNA1509_8403} {RNA1509_27017, RNA1509_8403, RNA815_9103.1} |
| 17. | MligTC455_41703 | 852 | 17.76 | Mlig455_059876 | Neo: - Age: - |
CYP2U1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_059876 {REF} {Length: 2192} {Pfam: Cytochrome P450 [PF00067.24, score=211.8]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=176, Expect=9e-53]} {Mouse: ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=171, Expect=6e-49]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=171, Expect=6e-49]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=165, Expect=4e-47]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=118, Expect=1e-29]} {Celegans: WBGene00018261, cyp-33C5, CYtochrome P450 family, [Score=148, Expect=1e-41]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=187, Expect=9e-56]} {RNA1509_33907, RNA1509_36811, RNA1509_44189} {RNA1310_1872.1, RNA1509_33907, RNA1509_36811, RNA1509_44189} {RNA1509_33907, RNA1509_36811, RNA1509_44189, RNA815_585.1} |
| 18. | MligTC455_53211 | 1358 | 28.3 | Mlig455_040065, Mlig455_040091 | Neo: - Age: logFC(26M/2M)=-0.362 Region-enriched R4: 1.888/0.01442 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_040065 {REF} {Length: 3189} {RNA1509_49542, RNA1509_9168} {RNA1310_8796.1, RNA1509_49542, RNA1509_9168} {RNA1509_49542, RNA1509_9168, RNA815_3100} Mlig455_040091 {REF} {Length: 2759} {RNA1509_39791, RNA1509_9168} {RNA1310_8796.1, RNA1509_39791} {RNA1509_39791, RNA815_3100} |
Berezikov Lab - 2020-2021 © ERIBA