Data search


search
Exact
Search

Results for MligTC455_46416

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46416 459 9.56 Mlig455_039409

Neo: -

Age: Down-Up-Up

Region-enriched R4: 3.256/0.00438
Region-enriched R5: 2.488/0.01437

MED6 Mlig455_039409 {REF} {Length: 898} {TRANSSPLICED} {Pfam: MED6 mediator sub complex component [PF04934.16, score=122.6]} {Human: ENSG00000133997, MED6, mediator complex subunit 6, [RH, Score=177, Expect=2e-54]} {Mouse: ENSMUSG00000002679, Med6, mediator complex subunit 6, [RH, Score=178, Expect=4e-55]} {Dmel: FBgn0024330, MED6, Mediator complex subunit 6, [RH, Score=186, Expect=2e-58]} {Celegans: WBGene00003164, mdt-6, Mediator of RNA polymerase II transcription subunit 6, [RH, Score=102, Expect=4e-26]} {Smed: dd_Smed_v6_5633_0_1, dd_Smed_v6_5633_0_1, [RH, Score=137, Expect=7e-40]} {RNA1509_27575, RNA1509_41032} {RNA1310_39144, RNA1509_27575, RNA1509_41032} {RNA1509_27575, RNA1509_41032, RNA815_18944}

Cumulative graph for MligTC455_46416

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.803 3.644 1.00000 1.00000
RegionR2 0.292 3.644 0.64994 0.98504
RegionR3 1.538 3.644 0.10716 0.57091
RegionR4 3.256 3.644 0.00034 0.00438
RegionR5 2.488 3.644 0.00155 0.01437
RegionR6 1.359 3.644 0.17316 0.73132
RegionR7 1.821 3.644 0.08412 0.55819
RegionR8 -5.951 3.644 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 7.267 3.644 0.04480 0.67871
RegenerationR2 0.209 3.644 0.71094 0.96032
RegenerationR3 -0.044 3.644 0.93906 1.00000
RegenerationR4 -0.25 3.644 0.67878 0.94545
RegenerationR5 0.042 3.644 0.94285 1.00000
RegenerationR6 0.85 3.644 0.17126 0.50255
RegenerationBL 2.265 3.644 0.06307 0.29170
RegenerationTP 3.841 3.644 0.00768 0.14719


Genes with expression patterns similar to MligTC455_46416

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46416 459 9.56 Mlig455_039409

Neo: -

Age: Down-Up-Up

Region-enriched R4: 3.256/0.00438
Region-enriched R5: 2.488/0.01437

MED6 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_039409 {REF} {Length: 898} {TRANSSPLICED} {Pfam: MED6 mediator sub complex component [PF04934.16, score=122.6]} {Human: ENSG00000133997, MED6, mediator complex subunit 6, [RH, Score=177, Expect=2e-54]} {Mouse: ENSMUSG00000002679, Med6, mediator complex subunit 6, [RH, Score=178, Expect=4e-55]} {Dmel: FBgn0024330, MED6, Mediator complex subunit 6, [RH, Score=186, Expect=2e-58]} {Celegans: WBGene00003164, mdt-6, Mediator of RNA polymerase II transcription subunit 6, [RH, Score=102, Expect=4e-26]} {Smed: dd_Smed_v6_5633_0_1, dd_Smed_v6_5633_0_1, [RH, Score=137, Expect=7e-40]} {RNA1509_27575, RNA1509_41032} {RNA1310_39144, RNA1509_27575, RNA1509_41032} {RNA1509_27575, RNA1509_41032, RNA815_18944}
2. MligTC455_17182 2118 44.13 Mlig455_061339

Neo: -

Age: -

Region-enriched R4: 1.141/0.00249

0.971 - - - - 0.971 - Mlig455_061339 {REF} {Length: 651} {TRANSSPLICED} {Pfam: MICOS complex subunit MIC13, QIL1 [PF15884.7, score=19.3]} {Celegans: WBGene00021024, W04C9.2, MICOS complex subunit MIC13, [RH, Score=42.4, Expect=4e-06]} {Smed: dd_Smed_v6_5666_0_1, dd_Smed_v6_5666_0_1, [RH, Score=46.6, Expect=6e-08]} {RNA1509_3916} {RNA1310_15906.1} {RNA815_28802.1}
3. MligTC455_17615 3908 81.43 Mlig455_013469

Neo: -

Age: -

SEPHS1 0.969 - - - - 0.969 - Mlig455_013469 {REF} {Length: 2017} {TRANSSPLICED} {Pfam: AIR synthase related protein, C-terminal domain [PF02769.24, score=82.1]; AIR synthase related protein, N-terminal domain [PF00586.26, score=41.2]} {Human: ENSG00000086475, SEPHS1, selenophosphate synthetase 1, [RH, Score=429, Expect=8e-150]; ENSG00000179918, SEPHS2, selenophosphate synthetase 2, [RH, Score=427, Expect=4e-148]} {Mouse: ENSMUSG00000026662, Sephs1, selenophosphate synthetase 1, [RH, Score=429, Expect=4e-150]; ENSMUSG00000049091, Sephs2, selenophosphate synthetase 2, [RH, Score=414, Expect=2e-143]} {Dmel: FBgn0261270, SelD, Selenide,water dikinase, [RH, Score=432, Expect=2e-151]} {Celegans: WBGene00012867, seld-1, Probable selenide, water dikinase, [RH, Score=343, Expect=7e-117]} {Smed: dd_Smed_v6_1918_0_2, dd_Smed_v6_1918_0_2, [RH, Score=372, Expect=8e-129]} {RNA1509_802} {RNA1310_20985} {RNA815_7104.1}
4. MligTC455_44247 1047 21.82 Mlig455_017698

Neo: -

Age: -

0.963 - - - - 0.963 - Mlig455_017698 {REF} {Length: 789} {TRANSSPLICED} {RNA1509_28598, RNA1509_58793} {RNA1310_18791, RNA1509_28598, RNA1509_58793} {RNA1509_28598, RNA1509_58793, RNA815_10594.2}
5. MligTC455_29350 1829 38.11 Mlig455_007352

Neo: -

Age: -

0.959 - - - - 0.959 - Mlig455_007352 {REF} {Length: 5414} {RNA1509_12008, RNA1509_14432, RNA1509_30088, RNA1509_55752} {RNA1310_1210, RNA1509_12008, RNA1509_14432, RNA1509_30088, RNA1509_55752} {RNA1509_12008, RNA1509_14432, RNA1509_30088, RNA1509_55752, RNA815_14545}
6. MligTC455_27257 21202 441.71 Mlig455_046866

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.261

RPL31 0.958 - - - - 0.958 - Mlig455_046866 {REF} {Length: 507} {TRANSSPLICED} {Pfam: Ribosomal protein L31e [PF01198.21, score=151.6]} {Human: ENSG00000071082, RPL31, ribosomal protein L31, [RH, Score=181, Expect=4e-60]} {Mouse: ENSMUSG00000073702, Rpl31, ribosomal protein L31, [RH, Score=181, Expect=3e-60]} {Dmel: FBgn0285949, RpL31, Ribosomal protein L31, [RH, Score=146, Expect=1e-46]} {Celegans: WBGene00004445, rpl-31, 60S ribosomal protein L31, [RH, Score=155, Expect=4e-50]} {Smed: dd_Smed_v6_113_0_1, dd_Smed_v6_113_0_1, [RH, Score=181, Expect=2e-60]} {RNA1509_253} {RNA1310_70845, RNA1509_253} {RNA1509_253, RNA815_35805.1}
7. MligTC455_07170 666 13.88 Mlig455_025202

Neo: -

Age: Up-Down-Down

Region-enriched R3: 2.753/0.00051

ASAH2 0.955 - - - - 0.955 - Mlig455_025202 {REF} {Length: 2383} {Pfam: Neutral/alkaline non-lysosomal ceramidase, N-terminal [PF04734.15, score=251.6]; Neutral/alkaline non-lysosomal ceramidase, C-terminal [PF17048.7, score=156.6]} {Human: ENSG00000188611, ASAH2, N-acylsphingosine amidohydrolase 2, [Score=304, Expect=3e-96]} {Mouse: ENSMUSG00000024887, Asah2, N-acylsphingosine amidohydrolase 2, [Score=308, Expect=2e-98]} {Dmel: FBgn0039774, CDase, Ceramidase, [Score=315, Expect=1e-101]} {Smed: dd_Smed_v6_1726_0_1, dd_Smed_v6_1726_0_1, [Score=316, Expect=5e-102]} {RNA1509_11988, RNA1509_57863} {RNA1310_19808, RNA1509_57863} {RNA1509_57863, RNA815_1566.1}
8. MligTC455_27020 51 1.05 Mlig455_047301

Neo: -

Age: Up-Down-Down

0.955 - - - - 0.955 - Mlig455_047301 {REF} {Length: 2457} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=43.0]} {Smed: dd_Smed_v6_33283_0_1, dd_Smed_v6_33283_0_1, [Score=228, Expect=7e-71]} {RNA1509_59825} {RNA1310_15909.1} {RNA815_23932}
9. MligTC455_20513 1037 21.6 Mlig455_008960

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.261

Region-enriched R5: 1.246/0.00187
Region-enriched R4: 1.106/0.03343

Regeneration-enriched BL: 1.969
Regeneration-enriched R6: 1.664

RPA1 0.954 - - - 0.954 - - Mlig455_008960 {REF} {Length: 2366} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=154.7]; Replication protein A OB domain [PF16900.7, score=113.5]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=58.4]; OB-fold nucleic acid binding domain [PF01336.27, score=53.1]; Cell division control protein 24, OB domain 3 [PF17244.4, score=29.2]} {Human: ENSG00000132383, RPA1, replication protein A1, [RH, Score=486, Expect=3e-165]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [RH, Score=480, Expect=1e-162]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [RH, Score=441, Expect=8e-148]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [RH, Score=219, Expect=1e-62]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [RH, Score=416, Expect=4e-139]} {RNA1509_51558} {RNA1310_7820.2, RNA1509_51558} {RNA1509_51558, RNA815_3419}
10. MligTC455_23219 18808 391.83 Mlig455_027499

Neo: -

Age: Down-Up-Up

RPL35A 0.953 - - - - 0.953 - Mlig455_027499 {REF} {Length: 597} {TRANSSPLICED} {Pfam: Ribosomal protein L35Ae [PF01247.20, score=147.9]; RimM N-terminal domain [PF01782.20, score=19.5]} {Human: ENSG00000182899, RPL35A, ribosomal protein L35a, [RH, Score=153, Expect=6e-49]} {Mouse: ENSMUSG00000060636, Rpl35a, ribosomal protein L35A, [RH, Score=153, Expect=3e-49]} {Dmel: FBgn0037328, RpL35A, Ribosomal protein L35A, [RH, Score=156, Expect=6e-50]} {Celegans: WBGene00004447, rpl-33, 60S ribosomal protein L35a, [RH, Score=141, Expect=2e-44]} {Smed: dd_Smed_v6_318_0_1, dd_Smed_v6_318_0_1, [RH, Score=151, Expect=1e-48]} {RNA1509_1396, RNA1509_15446, RNA1509_2005, RNA1509_22195, RNA1509_32667, RNA1509_43870, RNA1509_48633} {RNA1310_60075, RNA1509_1396, RNA1509_15446, RNA1509_2005, RNA1509_22195, RNA1509_32667, RNA1509_43870, RNA1509_48633} {RNA1509_1396, RNA1509_15446, RNA1509_2005, RNA1509_22195, RNA1509_32667, RNA1509_43870, RNA1509_48633, RNA815_30526}
11. MligTC455_29448 199 4.15 Mlig455_018571

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_018571 {REF} {Length: 8154} {NoTransDecoderORF} {RNA1509_50100} {RNA1310_24949.1} {RNA815_5685.1}
12. MligTC455_47192 381 7.93 Mlig455_037557

Neo: -

Age: -

CTNNBL1 0.952 - - - - 0.952 - Mlig455_037557 {REF} {Length: 3038} {TRANSSPLICED} {Pfam: Catenin-beta-like, Arm-motif containing nuclear [PF08216.13, score=104.3]} {Human: ENSG00000132792, CTNNBL1, catenin beta like 1, [RH, Score=470, Expect=4e-160]} {Mouse: ENSMUSG00000027649, Ctnnbl1, catenin, beta like 1, [RH, Score=467, Expect=7e-159]} {Dmel: FBgn0037644, CG11964, [RH, Score=474, Expect=1e-161]} {Celegans: WBGene00019711, M01E11.2, [RH, Score=368, Expect=1e-120]} {Smed: dd_Smed_v6_1800_0_2, dd_Smed_v6_1800_0_2, [RH, Score=355, Expect=2e-115]} {RNA1509_25982} {RNA1310_586.3, RNA1509_25982} {RNA1509_25982, RNA815_6423}
13. MligTC455_47193 376 7.83 Mlig455_057318

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_057318 {REF} {Length: 1670} {RNA1509_21922} {RNA1310_75967} {RNA815_43814}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA