TomoSeq data search

Data search

Results for MligTC455_46538

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_46538	8152	169.82	Mlig455_064859	Neo: - Age: -	GTPBP4	Mlig455_064859 {REF} {Length: 2189} {TRANSSPLICED} {Pfam: NOG1 N-terminal helical domain [PF17835.3, score=177.2]; Nucleolar GTP-binding protein 1 (NOG1) [PF06858.16, score=87.8]; NOGCT (NUC087) domain [PF08155.13, score=81.7]; 50S ribosome-binding GTPase [PF01926.25, score=66.1]; Ferrous iron transport protein B [PF02421.20, score=41.7]; RsgA GTPase [PF03193.18, score=20.6]} {Human: ENSG00000107937, GTPBP4, GTP binding protein 4, [RH, Score=803, Expect=0.0]} {Mouse: ENSMUSG00000021149, Gtpbp4, GTP binding protein 4, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0028473, Non1, Novel nucleolar protein 1, [RH, Score=693, Expect=0.0]} {Celegans: WBGene00020297, nog-1, Nucleolar GTP-binding protein 1, [RH, Score=664, Expect=0.0]} {Smed: dd_Smed_v6_764_0_1, dd_Smed_v6_764_0_1, [RH, Score=522, Expect=6e-179]} {RNA1509_464, RNA1509_9702} {RNA1310_11301, RNA1509_464, RNA1509_9702} {RNA1509_464, RNA1509_9702, RNA815_3988}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46538

8152

169.82

Mlig455_064859

Neo: -

Age: -

GTPBP4

Mlig455_064859 {REF} {Length: 2189} {TRANSSPLICED} {Pfam: NOG1 N-terminal helical domain [PF17835.3, score=177.2]; Nucleolar GTP-binding protein 1 (NOG1) [PF06858.16, score=87.8]; NOGCT (NUC087) domain [PF08155.13, score=81.7]; 50S ribosome-binding GTPase [PF01926.25, score=66.1]; Ferrous iron transport protein B [PF02421.20, score=41.7]; RsgA GTPase [PF03193.18, score=20.6]} {Human: ENSG00000107937, GTPBP4, GTP binding protein 4, [RH, Score=803, Expect=0.0]} {Mouse: ENSMUSG00000021149, Gtpbp4, GTP binding protein 4, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0028473, Non1, Novel nucleolar protein 1, [RH, Score=693, Expect=0.0]} {Celegans: WBGene00020297, nog-1, Nucleolar GTP-binding protein 1, [RH, Score=664, Expect=0.0]} {Smed: dd_Smed_v6_764_0_1, dd_Smed_v6_764_0_1, [RH, Score=522, Expect=6e-179]} {RNA1509_464, RNA1509_9702} {RNA1310_11301, RNA1509_464, RNA1509_9702} {RNA1509_464, RNA1509_9702, RNA815_3988}

Cumulative graph for MligTC455_46538

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.345	7.526	0.42750	1.00000
RegionR2	-0.221	7.526	0.45577	0.84360
RegionR3	0.324	7.526	0.18945	0.72550
RegionR4	0.083	7.526	0.77139	1.00000
RegionR5	0.078	7.526	0.74609	1.00000
RegionR6	0.005	7.526	0.98549	1.00000
RegionR7	0.274	7.526	0.28166	0.91482
RegionR8	-0.197	7.526	0.51803	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.413	7.526	0.48388	1.00000
RegenerationR2	0.148	7.526	0.63320	0.92867
RegenerationR3	-0.076	7.526	0.80945	0.98469
RegenerationR4	0.004	7.526	0.99044	1.00000
RegenerationR5	-0.05	7.526	0.87190	1.00000
RegenerationR6	0.08	7.526	0.80277	0.97853
RegenerationBL	-0.24	7.526	0.41750	0.78647
RegenerationTP	-0.554	7.526	0.08813	0.46817

Genes with expression patterns similar to MligTC455_46538

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46538	8152	169.82	Mlig455_064859	Neo: - Age: -	GTPBP4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_064859 {REF} {Length: 2189} {TRANSSPLICED} {Pfam: NOG1 N-terminal helical domain [PF17835.3, score=177.2]; Nucleolar GTP-binding protein 1 (NOG1) [PF06858.16, score=87.8]; NOGCT (NUC087) domain [PF08155.13, score=81.7]; 50S ribosome-binding GTPase [PF01926.25, score=66.1]; Ferrous iron transport protein B [PF02421.20, score=41.7]; RsgA GTPase [PF03193.18, score=20.6]} {Human: ENSG00000107937, GTPBP4, GTP binding protein 4, [RH, Score=803, Expect=0.0]} {Mouse: ENSMUSG00000021149, Gtpbp4, GTP binding protein 4, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0028473, Non1, Novel nucleolar protein 1, [RH, Score=693, Expect=0.0]} {Celegans: WBGene00020297, nog-1, Nucleolar GTP-binding protein 1, [RH, Score=664, Expect=0.0]} {Smed: dd_Smed_v6_764_0_1, dd_Smed_v6_764_0_1, [RH, Score=522, Expect=6e-179]} {RNA1509_464, RNA1509_9702} {RNA1310_11301, RNA1509_464, RNA1509_9702} {RNA1509_464, RNA1509_9702, RNA815_3988}
2.	MligTC455_47037	2387	49.73	Mlig455_037878, Mlig455_039047	Neo: Irradiation Age: -	RIOK2	1.715	-	-	-	0.747	0.968	-	Mlig455_037878 {REF} {Length: 1740} {Pfam: RIO1 family [PF01163.24, score=136.4]; Rio2, N-terminal [PF09202.13, score=82.7]; Phosphotransferase enzyme family [PF01636.25, score=31.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.7]} {Human: ENSG00000058729, RIOK2, RIO kinase 2, [RH, Score=275, Expect=6e-86]} {Mouse: ENSMUSG00000116564, Riok2, RIO kinase 2, [RH, Score=273, Expect=1e-85]} {Dmel: FBgn0039306, RIOK2, RIO kinase 2, [RH, Score=276, Expect=7e-87]} {Celegans: WBGene00013688, riok-2, Serine/threonine-protein kinase RIO2, [RH, Score=263, Expect=6e-82]} {Smed: dd_Smed_v6_5634_0_1, dd_Smed_v6_5634_0_1, [RH, Score=179, Expect=8e-51]} {RNA1509_13921, RNA1509_19503, RNA1509_20886, RNA1509_30978, RNA1509_49231} {RNA1310_20483, RNA1509_13921, RNA1509_19503, RNA1509_20886, RNA1509_30978, RNA1509_49231} {RNA1509_13921, RNA1509_19503, RNA1509_20886, RNA1509_30978, RNA1509_49231, RNA815_8494} Mlig455_039047 {REF} {Length: 1607} {Pfam: RIO1 family [PF01163.24, score=136.4]; Rio2, N-terminal [PF09202.13, score=82.7]; Phosphotransferase enzyme family [PF01636.25, score=29.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.7]} {Human: ENSG00000058729, RIOK2, RIO kinase 2, [RH, Score=276, Expect=2e-86]} {Mouse: ENSMUSG00000116564, Riok2, RIO kinase 2, [RH, Score=275, Expect=4e-86]} {Dmel: FBgn0039306, RIOK2, RIO kinase 2, [RH, Score=274, Expect=6e-86]} {Celegans: WBGene00013688, riok-2, Serine/threonine-protein kinase RIO2, [RH, Score=266, Expect=3e-83]} {Smed: dd_Smed_v6_5634_0_1, dd_Smed_v6_5634_0_1, [RH, Score=175, Expect=2e-49]} {RNA1509_19503} {RNA1310_20483} {RNA815_8494}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_46538

8152

169.82

Mlig455_064859

Neo: -

Age: -

GTPBP4

1.000

MligTC455_47037

2387

49.73

Mlig455_037878, Mlig455_039047

Neo: Irradiation

Age: -

RIOK2

1.715

0.747

0.968

Mlig455_037878 {REF} {Length: 1740} {Pfam: RIO1 family [PF01163.24, score=136.4]; Rio2, N-terminal [PF09202.13, score=82.7]; Phosphotransferase enzyme family [PF01636.25, score=31.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.7]} {Human: ENSG00000058729, RIOK2, RIO kinase 2, [RH, Score=275, Expect=6e-86]} {Mouse: ENSMUSG00000116564, Riok2, RIO kinase 2, [RH, Score=273, Expect=1e-85]} {Dmel: FBgn0039306, RIOK2, RIO kinase 2, [RH, Score=276, Expect=7e-87]} {Celegans: WBGene00013688, riok-2, Serine/threonine-protein kinase RIO2, [RH, Score=263, Expect=6e-82]} {Smed: dd_Smed_v6_5634_0_1, dd_Smed_v6_5634_0_1, [RH, Score=179, Expect=8e-51]} {RNA1509_13921, RNA1509_19503, RNA1509_20886, RNA1509_30978, RNA1509_49231} {RNA1310_20483, RNA1509_13921, RNA1509_19503, RNA1509_20886, RNA1509_30978, RNA1509_49231} {RNA1509_13921, RNA1509_19503, RNA1509_20886, RNA1509_30978, RNA1509_49231, RNA815_8494}

Mlig455_039047 {REF} {Length: 1607} {Pfam: RIO1 family [PF01163.24, score=136.4]; Rio2, N-terminal [PF09202.13, score=82.7]; Phosphotransferase enzyme family [PF01636.25, score=29.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.7]} {Human: ENSG00000058729, RIOK2, RIO kinase 2, [RH, Score=276, Expect=2e-86]} {Mouse: ENSMUSG00000116564, Riok2, RIO kinase 2, [RH, Score=275, Expect=4e-86]} {Dmel: FBgn0039306, RIOK2, RIO kinase 2, [RH, Score=274, Expect=6e-86]} {Celegans: WBGene00013688, riok-2, Serine/threonine-protein kinase RIO2, [RH, Score=266, Expect=3e-83]} {Smed: dd_Smed_v6_5634_0_1, dd_Smed_v6_5634_0_1, [RH, Score=175, Expect=2e-49]} {RNA1509_19503} {RNA1310_20483} {RNA815_8494}