TomoSeq data search

Data search

Results for MligTC455_46551

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_46551	8059	167.90	Mlig455_048565, Mlig455_049048	Neo: - Age: logFC(26M/2M)=-0.245	PYGM	Mlig455_048565 {REF} {Length: 4579} {Pfam: Carbohydrate phosphorylase [PF00343.22, score=1135.9]} {Human: ENSG00000068976, PYGM, glycogen phosphorylase, muscle associated, [RH, Score=1231, Expect=0.0]; ENSG00000100504, PYGL, glycogen phosphorylase L, [RH, Score=1216, Expect=0.0]; ENSG00000100994, PYGB, glycogen phosphorylase B, [RH, Score=1208, Expect=0.0]} {Mouse: ENSMUSG00000106877, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000032648, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000021069, Pygl, liver glycogen phosphorylase, [RH, Score=1218, Expect=0.0]; ENSMUSG00000033059, Pygb, brain glycogen phosphorylase, [RH, Score=1196, Expect=0.0]} {Dmel: FBgn0004507, GlyP, Glycogen phosphorylase, [RH, Score=1207, Expect=0.0]} {Celegans: WBGene00020696, T22F3.3, Alpha-1,4 glucan phosphorylase, [RH, Score=1203, Expect=0.0]} {Smed: dd_Smed_v6_1532_0_1, dd_Smed_v6_1532_0_1, [RH, Score=1233, Expect=0.0]} {RNA1509_606} {RNA1310_6446.1} {RNA815_1975} Mlig455_049048 {REF} {Length: 4783} {Pfam: Carbohydrate phosphorylase [PF00343.22, score=1136.9]} {Human: ENSG00000068976, PYGM, glycogen phosphorylase, muscle associated, [RH, Score=1231, Expect=0.0]; ENSG00000100504, PYGL, glycogen phosphorylase L, [RH, Score=1217, Expect=0.0]; ENSG00000100994, PYGB, glycogen phosphorylase B, [RH, Score=1205, Expect=0.0]} {Mouse: ENSMUSG00000032648, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000106877, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000021069, Pygl, liver glycogen phosphorylase, [RH, Score=1219, Expect=0.0]; ENSMUSG00000033059, Pygb, brain glycogen phosphorylase, [RH, Score=1192, Expect=0.0]} {Dmel: FBgn0004507, GlyP, Glycogen phosphorylase, [RH, Score=1204, Expect=0.0]} {Celegans: WBGene00020696, T22F3.3, Alpha-1,4 glucan phosphorylase, [RH, Score=1204, Expect=0.0]} {Smed: dd_Smed_v6_1532_0_1, dd_Smed_v6_1532_0_1, [RH, Score=1233, Expect=0.0]} {RNA1509_45141, RNA1509_606} {RNA1310_6446.1, RNA1509_45141} {RNA1509_45141, RNA815_1975}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46551

8059

167.90

Mlig455_048565, Mlig455_049048

Neo: -

Age: logFC(26M/2M)=-0.245

PYGM

Mlig455_048565 {REF} {Length: 4579} {Pfam: Carbohydrate phosphorylase [PF00343.22, score=1135.9]} {Human: ENSG00000068976, PYGM, glycogen phosphorylase, muscle associated, [RH, Score=1231, Expect=0.0]; ENSG00000100504, PYGL, glycogen phosphorylase L, [RH, Score=1216, Expect=0.0]; ENSG00000100994, PYGB, glycogen phosphorylase B, [RH, Score=1208, Expect=0.0]} {Mouse: ENSMUSG00000106877, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000032648, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000021069, Pygl, liver glycogen phosphorylase, [RH, Score=1218, Expect=0.0]; ENSMUSG00000033059, Pygb, brain glycogen phosphorylase, [RH, Score=1196, Expect=0.0]} {Dmel: FBgn0004507, GlyP, Glycogen phosphorylase, [RH, Score=1207, Expect=0.0]} {Celegans: WBGene00020696, T22F3.3, Alpha-1,4 glucan phosphorylase, [RH, Score=1203, Expect=0.0]} {Smed: dd_Smed_v6_1532_0_1, dd_Smed_v6_1532_0_1, [RH, Score=1233, Expect=0.0]} {RNA1509_606} {RNA1310_6446.1} {RNA815_1975}

Mlig455_049048 {REF} {Length: 4783} {Pfam: Carbohydrate phosphorylase [PF00343.22, score=1136.9]} {Human: ENSG00000068976, PYGM, glycogen phosphorylase, muscle associated, [RH, Score=1231, Expect=0.0]; ENSG00000100504, PYGL, glycogen phosphorylase L, [RH, Score=1217, Expect=0.0]; ENSG00000100994, PYGB, glycogen phosphorylase B, [RH, Score=1205, Expect=0.0]} {Mouse: ENSMUSG00000032648, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000106877, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000021069, Pygl, liver glycogen phosphorylase, [RH, Score=1219, Expect=0.0]; ENSMUSG00000033059, Pygb, brain glycogen phosphorylase, [RH, Score=1192, Expect=0.0]} {Dmel: FBgn0004507, GlyP, Glycogen phosphorylase, [RH, Score=1204, Expect=0.0]} {Celegans: WBGene00020696, T22F3.3, Alpha-1,4 glucan phosphorylase, [RH, Score=1204, Expect=0.0]} {Smed: dd_Smed_v6_1532_0_1, dd_Smed_v6_1532_0_1, [RH, Score=1233, Expect=0.0]} {RNA1509_45141, RNA1509_606} {RNA1310_6446.1, RNA1509_45141} {RNA1509_45141, RNA815_1975}

Cumulative graph for MligTC455_46551

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.114	7.471	0.75688	1.00000
RegionR2	0.15	7.471	0.50423	0.88330
RegionR3	0.361	7.471	0.05185	0.39845
RegionR4	0.599	7.471	0.00582	0.04090
RegionR5	0.211	7.471	0.24658	0.56055
RegionR6	-0.137	7.471	0.48385	1.00000
RegionR7	-0.354	7.471	0.09848	0.60028
RegionR8	-0.944	7.471	0.00040	0.02357

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.554	7.471	0.00908	0.42974
RegenerationR2	-0.174	7.471	0.44864	0.84542
RegenerationR3	-0.041	7.471	0.86310	1.00000
RegenerationR4	-0.011	7.471	0.96262	1.00000
RegenerationR5	0.166	7.471	0.48110	0.84686
RegenerationR6	0.253	7.471	0.29158	0.64187
RegenerationBL	0.255	7.471	0.27612	0.63644
RegenerationTP	-0.469	7.471	0.08965	0.47155

Genes with expression patterns similar to MligTC455_46551

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46551	8059	167.9	Mlig455_048565, Mlig455_049048	Neo: - Age: logFC(26M/2M)=-0.245	PYGM	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048565 {REF} {Length: 4579} {Pfam: Carbohydrate phosphorylase [PF00343.22, score=1135.9]} {Human: ENSG00000068976, PYGM, glycogen phosphorylase, muscle associated, [RH, Score=1231, Expect=0.0]; ENSG00000100504, PYGL, glycogen phosphorylase L, [RH, Score=1216, Expect=0.0]; ENSG00000100994, PYGB, glycogen phosphorylase B, [RH, Score=1208, Expect=0.0]} {Mouse: ENSMUSG00000106877, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000032648, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000021069, Pygl, liver glycogen phosphorylase, [RH, Score=1218, Expect=0.0]; ENSMUSG00000033059, Pygb, brain glycogen phosphorylase, [RH, Score=1196, Expect=0.0]} {Dmel: FBgn0004507, GlyP, Glycogen phosphorylase, [RH, Score=1207, Expect=0.0]} {Celegans: WBGene00020696, T22F3.3, Alpha-1,4 glucan phosphorylase, [RH, Score=1203, Expect=0.0]} {Smed: dd_Smed_v6_1532_0_1, dd_Smed_v6_1532_0_1, [RH, Score=1233, Expect=0.0]} {RNA1509_606} {RNA1310_6446.1} {RNA815_1975} Mlig455_049048 {REF} {Length: 4783} {Pfam: Carbohydrate phosphorylase [PF00343.22, score=1136.9]} {Human: ENSG00000068976, PYGM, glycogen phosphorylase, muscle associated, [RH, Score=1231, Expect=0.0]; ENSG00000100504, PYGL, glycogen phosphorylase L, [RH, Score=1217, Expect=0.0]; ENSG00000100994, PYGB, glycogen phosphorylase B, [RH, Score=1205, Expect=0.0]} {Mouse: ENSMUSG00000032648, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000106877, Pygm, muscle glycogen phosphorylase, [RH, Score=1236, Expect=0.0]; ENSMUSG00000021069, Pygl, liver glycogen phosphorylase, [RH, Score=1219, Expect=0.0]; ENSMUSG00000033059, Pygb, brain glycogen phosphorylase, [RH, Score=1192, Expect=0.0]} {Dmel: FBgn0004507, GlyP, Glycogen phosphorylase, [RH, Score=1204, Expect=0.0]} {Celegans: WBGene00020696, T22F3.3, Alpha-1,4 glucan phosphorylase, [RH, Score=1204, Expect=0.0]} {Smed: dd_Smed_v6_1532_0_1, dd_Smed_v6_1532_0_1, [RH, Score=1233, Expect=0.0]} {RNA1509_45141, RNA1509_606} {RNA1310_6446.1, RNA1509_45141} {RNA1509_45141, RNA815_1975}
2.	MligTC455_53641	6774	141.12	Mlig455_051114	Neo: - Age: -	GRN	0.956	-	-	-	-	0.956	-	Mlig455_051114 {REF} {Length: 2332} {Pfam: Granulin [PF00396.20, score=99.5]} {Human: ENSG00000030582, GRN, granulin precursor, [Score=114, Expect=9e-29]} {Mouse: ENSMUSG00000034708, Grn, granulin, [Score=105, Expect=3e-25]} {Celegans: WBGene00011936, pgrn-1, ProGRaNulin homolog, [Score=85.1, Expect=4e-19]} {Smed: dd_Smed_v6_442_0_1, dd_Smed_v6_442_0_1, [Score=87.8, Expect=7e-21]} {RNA1509_3025, RNA1509_48875} {RNA1310_13165, RNA1509_3025} {RNA1509_3025, RNA815_4475.1}
3.	MligTC455_38483	2866	59.71	Mlig455_045593, Mlig455_045649	Neo: Germline Age: - Region-specific R4: 1.712 Region-enriched R4: 1.597/0.00007	CUL3	0.955	-	-	-	-	0.955	-	Mlig455_045593 {REF} {Length: 4082} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=721.0]; Cullin protein neddylation domain [PF10557.11, score=96.4]} {Human: ENSG00000036257, CUL3, cullin 3, [RH, Score=927, Expect=0.0]} {Mouse: ENSMUSG00000004364, Cul3, cullin 3, [RH, Score=929, Expect=0.0]} {Dmel: FBgn0261268, Cul3, Cullin 3, [RH, Score=870, Expect=0.0]} {Celegans: WBGene00000838, cul-3, Cullin-3, [RH, Score=699, Expect=0.0]} {Smed: dd_Smed_v6_15476_0_1, dd_Smed_v6_15476_0_1, [RH, Score=869, Expect=0.0]} {RNA1509_1509, RNA1509_22632, RNA1509_27767} {RNA1310_1917, RNA1509_1509, RNA1509_22632, RNA1509_27767} {RNA1509_1509, RNA1509_22632, RNA1509_27767, RNA815_1779} Mlig455_045649 {REF} {Length: 4084} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=721.0]; Cullin protein neddylation domain [PF10557.11, score=96.4]} {Human: ENSG00000036257, CUL3, cullin 3, [RH, Score=927, Expect=0.0]} {Mouse: ENSMUSG00000004364, Cul3, cullin 3, [RH, Score=929, Expect=0.0]} {Dmel: FBgn0261268, Cul3, Cullin 3, [RH, Score=870, Expect=0.0]} {Celegans: WBGene00000838, cul-3, Cullin-3, [RH, Score=699, Expect=0.0]} {Smed: dd_Smed_v6_15476_0_1, dd_Smed_v6_15476_0_1, [RH, Score=869, Expect=0.0]} {RNA1509_1509, RNA1509_56703} {RNA1310_1917, RNA1509_56703} {RNA1509_56703, RNA815_1779}
4.	MligTC455_45176	534	11.12	Mlig455_036711	Neo: - Age: -	GOLGA2	0.951	-	-	-	-	0.951	-	Mlig455_036711 {REF} {Length: 4819} {Pfam: Putative golgin subfamily A member 2-like protein 5 [PF15070.8, score=166.8]; Family with sequence similarity 184, A and B [PF15665.7, score=18.6]} {Human: ENSG00000167110, GOLGA2, golgin A2, [RH, Score=96.3, Expect=4e-20]} {Mouse: ENSMUSG00000002546, Golga2, golgi autoantigen, golgin subfamily a, 2, [RH, Score=165, Expect=3e-41]} {Dmel: FBgn0034697, GM130, Golgi matrix protein 130 kD, [RH, Score=80.1, Expect=6e-15]} {Celegans: WBGene00018017, golg-2, GOLGi associated coiled-coil protein homolog, [RH, Score=55.8, Expect=1e-07]} {Smed: dd_Smed_v6_6515_0_1, dd_Smed_v6_6515_0_1, [RH, Score=222, Expect=1e-60]} {RNA1509_16173} {RNA1310_2918, RNA1509_16173} {RNA1509_16173, RNA815_3140.1}