Data search


search
Exact
Search

Results for MligTC455_46576

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46576 6599 137.48 Mlig455_047278

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.264

Mlig455_047278 {REF} {Length: 2102} {Pfam: Profilin [PF00235.21, score=55.9]} {Mouse: ENSMUSG00000040838, Gm11639, predicted gene 11639, [Score=56.2, Expect=1e-07]} {RNA1509_6864} {RNA1310_38271} {RNA815_12461.1}

Cumulative graph for MligTC455_46576

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.966 7.163 0.06820 0.58808
RegionR2 -1.187 7.163 0.00002 0.00126
RegionR3 -0.024 7.163 0.91630 1.00000
RegionR4 0.383 7.163 0.14853 0.39731
RegionR5 0.165 7.163 0.44152 0.80253
RegionR6 0.864 7.163 0.00005 0.00457
RegionR7 -0.005 7.163 0.98375 1.00000
RegionR8 0.77 7.163 0.00555 0.13449

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.217 7.163 0.05059 0.69895
RegenerationR2 0.648 7.163 0.01499 0.20029
RegenerationR3 0.462 7.163 0.09184 0.48884
RegenerationR4 0.719 7.163 0.01026 0.15354
RegenerationR5 0.815 7.163 0.00213 0.07995
RegenerationR6 0.461 7.163 0.08070 0.35476
RegenerationBL 0.152 7.163 0.54006 0.89891
RegenerationTP 0.013 7.163 0.96382 1.00000


Genes with expression patterns similar to MligTC455_46576

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46576 6599 137.48 Mlig455_047278

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.264

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_047278 {REF} {Length: 2102} {Pfam: Profilin [PF00235.21, score=55.9]} {Mouse: ENSMUSG00000040838, Gm11639, predicted gene 11639, [Score=56.2, Expect=1e-07]} {RNA1509_6864} {RNA1310_38271} {RNA815_12461.1}
2. MligTC455_46577 7198 149.96 Mlig455_047328

Neo: -

Age: logFC(26M/2M)=-0.290

5.743 0.988 0.799 0.991 0.979 0.992 0.994 Mlig455_047328 {REF} {Length: 2358} {Pfam: Profilin [PF00235.21, score=55.6]} {Mouse: ENSMUSG00000040838, Gm11639, predicted gene 11639, [RH, Score=74.3, Expect=4e-13]} {RNA1509_6864} {RNA1310_38271} {RNA815_12461.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA