M. lignano Tomo-Seq
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Results for MligTC455_46624

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46624 332 6.91 Mlig455_066832

Neo: -

Age: logFC(26M/2M)=0.267

Region-enriched R4: 2.791/0.04755

 UBE2D2 Mlig455_066832 {REF} {Length: 898} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=177.6]} {Human: ENSG00000131508, UBE2D2, ubiquitin conjugating enzyme E2 D2, [RH, Score=289, Expect=9e-102]; ENSG00000109332, UBE2D3, ubiquitin conjugating enzyme E2 D3, [RH, Score=288, Expect=1e-101]; ENSG00000078967, UBE2D4, ubiquitin conjugating enzyme E2 D4 (putative), [RH, Score=283, Expect=1e-99]; ENSG00000072401, UBE2D1, ubiquitin conjugating enzyme E2 D1, [RH, Score=275, Expect=3e-96]} {Mouse: ENSMUSG00000091896, Ube2d2a, ubiquitin-conjugating enzyme E2D 2A, [RH, Score=289, Expect=6e-102]; ENSMUSG00000078578, Ube2d3, ubiquitin-conjugating enzyme E2D 3, [RH, Score=288, Expect=1e-101]; ENSMUSG00000019927, Ube2d1, ubiquitin-conjugating enzyme E2D 1, [RH, Score=275, Expect=2e-96]} {Dmel: FBgn0011217, eff, effete, [RH, Score=295, Expect=9e-105]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [RH, Score=293, Expect=7e-104]} {Smed: dd_Smed_v6_153_0_1, dd_Smed_v6_153_0_1, [RH, Score=265, Expect=6e-93]} {RNA1509_9814} {RNA1310_38957} {RNA815_18588}

Cumulative graph for MligTC455_46624

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.873 3.195 0.31971 0.96891
RegionR2 0.224 3.195 0.72390 1.00000
RegionR3 -1.843 3.195 0.99816 1.00000
RegionR4 2.791 3.195 0.00715 0.04755
RegionR5 0.965 3.195 0.29711 0.63136
RegionR6 0.057 3.195 0.77644 1.00000
RegionR7 0.976 3.195 0.35120 0.98724
RegionR8 -5.042 3.195 0.12382 0.64613

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.083 3.195 0.65123 1.00000
RegenerationR2 -0.154 3.195 0.86228 1.00000
RegenerationR3 2.207 3.195 0.04161 0.35771
RegenerationR4 0.036 3.195 0.97873 1.00000
RegenerationR5 0.35 3.195 0.72347 0.96070
RegenerationR6 1.226 3.195 0.22606 0.57154
RegenerationBL 2.141 3.195 0.14746 0.45832
RegenerationTP 3.156 3.195 0.08748 0.46648


Genes with expression patterns similar to MligTC455_46624

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46624 332 6.91 Mlig455_066832

Neo: -

Age: logFC(26M/2M)=0.267

Region-enriched R4: 2.791/0.04755

 UBE2D2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_066832 {REF} {Length: 898} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=177.6]} {Human: ENSG00000131508, UBE2D2, ubiquitin conjugating enzyme E2 D2, [RH, Score=289, Expect=9e-102]; ENSG00000109332, UBE2D3, ubiquitin conjugating enzyme E2 D3, [RH, Score=288, Expect=1e-101]; ENSG00000078967, UBE2D4, ubiquitin conjugating enzyme E2 D4 (putative), [RH, Score=283, Expect=1e-99]; ENSG00000072401, UBE2D1, ubiquitin conjugating enzyme E2 D1, [RH, Score=275, Expect=3e-96]} {Mouse: ENSMUSG00000091896, Ube2d2a, ubiquitin-conjugating enzyme E2D 2A, [RH, Score=289, Expect=6e-102]; ENSMUSG00000078578, Ube2d3, ubiquitin-conjugating enzyme E2D 3, [RH, Score=288, Expect=1e-101]; ENSMUSG00000019927, Ube2d1, ubiquitin-conjugating enzyme E2D 1, [RH, Score=275, Expect=2e-96]} {Dmel: FBgn0011217, eff, effete, [RH, Score=295, Expect=9e-105]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [RH, Score=293, Expect=7e-104]} {Smed: dd_Smed_v6_153_0_1, dd_Smed_v6_153_0_1, [RH, Score=265, Expect=6e-93]} {RNA1509_9814} {RNA1310_38957} {RNA815_18588}
2. MligTC455_49540 279 5.8 Mlig455_052675

Neo: -

Age: -

 KLHL12 0.958 - - - 0.958 - - Mlig455_052675 {REF} {Length: 3939} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=210.3]; Kelch motif [PF13964.8, score=138.0]; BTB/POZ domain [PF00651.33, score=109.1]; BTB And C-terminal Kelch [PF07707.17, score=75.3]; Galactose oxidase, central domain [PF13418.8, score=75.3]; Kelch motif [PF07646.17, score=69.9]; Galactose oxidase, central domain [PF13415.8, score=67.7]; Kelch motif [PF13854.8, score=36.9]} {Human: ENSG00000117153, KLHL12, kelch like family member 12, [Score=557, Expect=0.0]} {Mouse: ENSMUSG00000026455, Klhl12, kelch-like 12, [Score=558, Expect=0.0]} {Dmel: FBgn0037978, KLHL18, Kelch like family member 18, [Score=338, Expect=5e-109]} {Celegans: WBGene00020030, R12E2.1, [Score=313, Expect=6e-99]} {Smed: dd_Smed_v6_7304_0_1, dd_Smed_v6_7304_0_1, [Score=570, Expect=0.0]} {RNA1509_17800} {RNA1310_5820} {RNA815_4439}
3. MligTC455_43647 389 8.1 Mlig455_051971

Neo: -

Age: -

 COG3 0.957 - - - 0.957 - - Mlig455_051971 {REF} {Length: 3373} {Pfam: Sec34-like family [PF04136.17, score=140.2]} {Human: ENSG00000136152, COG3, component of oligomeric golgi complex 3, [RH, Score=576, Expect=0.0]} {Mouse: ENSMUSG00000034893, Cog3, component of oligomeric golgi complex 3, [RH, Score=579, Expect=0.0]} {Dmel: FBgn0031536, Cog3, [RH, Score=521, Expect=8e-173]} {Celegans: WBGene00022121, cogc-3, Conserved Oligomeric Golgi (COG) Component, [RH, Score=368, Expect=3e-115]} {Smed: dd_Smed_v6_8080_0_1, dd_Smed_v6_8080_0_1, [RH, Score=539, Expect=0.0]} {RNA1509_10549, RNA1509_43100, RNA1509_52372} {RNA1310_5571.1, RNA1509_10549, RNA1509_43100, RNA1509_52372} {RNA1509_10549, RNA1509_43100, RNA1509_52372, RNA815_1675}
4. MligTC455_30534 147 3.06 Mlig455_011586

Neo: -

Age: Down-Up-Down

 ODF2 0.956 - - - 0.956 - - Mlig455_011586 {REF} {Length: 3719} {TRANSSPLICED} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [Score=66.2, Expect=1e-10]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [Score=68.2, Expect=3e-11]} {Smed: dd_Smed_v6_3609_0_2, dd_Smed_v6_3609_0_2, [Score=54.7, Expect=1e-07]} {RNA1509_12480} {RNA1310_8290} {RNA815_8319}
5. MligTC455_24414 113 2.36 Mlig455_044085

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.598/0.01800

 0.952 - 0.952 - - - - Mlig455_044085 {REF} {Length: 2409} {TRANSSPLICED} {RNA1509_8239} {RNA1310_6886.1} {RNA815_16300.1}

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