TomoSeq data search

Data search

Results for MligTC455_46655

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_46655	11265	234.69	Mlig455_052741	Neo: - Age: -	COX5B	Mlig455_052741 {REF} {Length: 1252} {TRANSSPLICED} {Pfam: Cytochrome c oxidase subunit Vb [PF01215.21, score=33.2]} {Human: ENSG00000135940, COX5B, cytochrome c oxidase subunit 5B, [RH, Score=53.1, Expect=1e-08]} {Mouse: ENSMUSG00000061518, Cox5b, cytochrome c oxidase subunit 5B, [RH, Score=51.2, Expect=5e-08]; ENSMUSG00000079941, Gm11273, predicted gene 11273, [RH, Score=51.2, Expect=5e-08]} {Dmel: FBgn0031830, COX5B, Cytochrome c oxidase subunit 5B, [RH, Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_861_0_1, dd_Smed_v6_861_0_1, [RH, Score=68.2, Expect=8e-14]} {RNA1509_22036, RNA1509_57375, RNA1509_636} {RNA1310_28948.1, RNA1509_22036, RNA1509_57375, RNA1509_636} {RNA1509_22036, RNA1509_57375, RNA1509_636, RNA815_11888.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46655

11265

234.69

Mlig455_052741

Neo: -

Age: -

COX5B

Mlig455_052741 {REF} {Length: 1252} {TRANSSPLICED} {Pfam: Cytochrome c oxidase subunit Vb [PF01215.21, score=33.2]} {Human: ENSG00000135940, COX5B, cytochrome c oxidase subunit 5B, [RH, Score=53.1, Expect=1e-08]} {Mouse: ENSMUSG00000061518, Cox5b, cytochrome c oxidase subunit 5B, [RH, Score=51.2, Expect=5e-08]; ENSMUSG00000079941, Gm11273, predicted gene 11273, [RH, Score=51.2, Expect=5e-08]} {Dmel: FBgn0031830, COX5B, Cytochrome c oxidase subunit 5B, [RH, Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_861_0_1, dd_Smed_v6_861_0_1, [RH, Score=68.2, Expect=8e-14]} {RNA1509_22036, RNA1509_57375, RNA1509_636} {RNA1310_28948.1, RNA1509_22036, RNA1509_57375, RNA1509_636} {RNA1509_22036, RNA1509_57375, RNA1509_636, RNA815_11888.1}

Cumulative graph for MligTC455_46655

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.328	7.943	0.24506	0.89142
RegionR2	-0.391	7.943	0.01521	0.13038
RegionR3	0.404	7.943	0.00168	0.04343
RegionR4	0.7	7.943	0.00000	0.00003
RegionR5	0.458	7.943	0.00016	0.00235
RegionR6	0.178	7.943	0.18109	0.74489
RegionR7	-0.463	7.943	0.00564	0.11886
RegionR8	-0.558	7.943	0.00692	0.15278

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.333	7.943	0.37417	1.00000
RegenerationR2	0.277	7.943	0.06859	0.42699
RegenerationR3	-0.016	7.943	0.91737	1.00000
RegenerationR4	-0.006	7.943	0.97086	1.00000
RegenerationR5	0.147	7.943	0.32332	0.74587
RegenerationR6	0.157	7.943	0.32217	0.66842
RegenerationBL	0.59	7.943	0.00023	0.00826
RegenerationTP	0.05	7.943	0.79386	1.00000

Genes with expression patterns similar to MligTC455_46655

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46655	11265	234.69	Mlig455_052741	Neo: - Age: -	COX5B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_052741 {REF} {Length: 1252} {TRANSSPLICED} {Pfam: Cytochrome c oxidase subunit Vb [PF01215.21, score=33.2]} {Human: ENSG00000135940, COX5B, cytochrome c oxidase subunit 5B, [RH, Score=53.1, Expect=1e-08]} {Mouse: ENSMUSG00000061518, Cox5b, cytochrome c oxidase subunit 5B, [RH, Score=51.2, Expect=5e-08]; ENSMUSG00000079941, Gm11273, predicted gene 11273, [RH, Score=51.2, Expect=5e-08]} {Dmel: FBgn0031830, COX5B, Cytochrome c oxidase subunit 5B, [RH, Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_861_0_1, dd_Smed_v6_861_0_1, [RH, Score=68.2, Expect=8e-14]} {RNA1509_22036, RNA1509_57375, RNA1509_636} {RNA1310_28948.1, RNA1509_22036, RNA1509_57375, RNA1509_636} {RNA1509_22036, RNA1509_57375, RNA1509_636, RNA815_11888.1}
2.	MligTC455_50812	4042	84.22	Mlig455_022462	Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.359 Regeneration-enriched BL: 1.359	KHDRBS2	0.972	-	-	-	0.972	-	-	Mlig455_022462 {REF} {Length: 5489} {Pfam: KH domain [PF00013.31, score=29.7]} {Human: ENSG00000112232, KHDRBS2, KH RNA binding domain containing, signal transduction associated 2, [Score=125, Expect=1e-32]; ENSG00000131773, KHDRBS3, KH RNA binding domain containing, signal transduction associated 3, [Score=123, Expect=7e-32]; ENSG00000121774, KHDRBS1, KH RNA binding domain containing, signal transduction associated 1, [Score=119, Expect=5e-30]} {Mouse: ENSMUSG00000026058, Khdrbs2, KH domain containing, RNA binding, signal transduction associated 2, [Score=125, Expect=5e-33]; ENSMUSG00000022332, Khdrbs3, KH domain containing, RNA binding, signal transduction associated 3, [Score=122, Expect=6e-32]; ENSMUSG00000028790, Khdrbs1, KH domain containing, RNA binding, signal transduction associated 1, [Score=120, Expect=2e-30]} {Dmel: FBgn0022987, qkr54B, quaking related 54B, [RH, Score=124, Expect=5e-32]} {Celegans: WBGene00006423, asd-2, RNA-binding protein asd-2, [Score=86.7, Expect=4e-19]} {Smed: dd_Smed_v6_294_0_1, dd_Smed_v6_294_0_1, [RH, Score=160, Expect=8e-47]} {RNA1509_1718} {RNA1310_5438, RNA1509_1718} {RNA1509_1718, RNA815_3481.1}
3.	MligTC455_17471	120	2.49	Mlig455_063075	Neo: Int S/G2/M Age: -	CDT1	0.959	-	-	-	0.959	-	-	Mlig455_063075 {REF} {Length: 2566} {TRANSSPLICED} {Pfam: DNA replication factor CDT1 like [PF08839.13, score=88.2]; DNA replication factor Cdt1 C-terminal domain [PF16679.7, score=51.8]} {Human: ENSG00000167513, CDT1, chromatin licensing and DNA replication factor 1, [RH, Score=118, Expect=2e-27]} {Dmel: FBgn0000996, dup, double parked, [RH, Score=79.0, Expect=6e-15]} {RNA1509_15628} {RNA1310_4469.1} {RNA815_17273}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_46655

11265

234.69

Mlig455_052741

Neo: -

Age: -

COX5B

1.000

MligTC455_50812

4042

84.22

Mlig455_022462

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.359

Regeneration-enriched BL: 1.359

KHDRBS2

0.972

Mlig455_022462 {REF} {Length: 5489} {Pfam: KH domain [PF00013.31, score=29.7]} {Human: ENSG00000112232, KHDRBS2, KH RNA binding domain containing, signal transduction associated 2, [Score=125, Expect=1e-32]; ENSG00000131773, KHDRBS3, KH RNA binding domain containing, signal transduction associated 3, [Score=123, Expect=7e-32]; ENSG00000121774, KHDRBS1, KH RNA binding domain containing, signal transduction associated 1, [Score=119, Expect=5e-30]} {Mouse: ENSMUSG00000026058, Khdrbs2, KH domain containing, RNA binding, signal transduction associated 2, [Score=125, Expect=5e-33]; ENSMUSG00000022332, Khdrbs3, KH domain containing, RNA binding, signal transduction associated 3, [Score=122, Expect=6e-32]; ENSMUSG00000028790, Khdrbs1, KH domain containing, RNA binding, signal transduction associated 1, [Score=120, Expect=2e-30]} {Dmel: FBgn0022987, qkr54B, quaking related 54B, [RH, Score=124, Expect=5e-32]} {Celegans: WBGene00006423, asd-2, RNA-binding protein asd-2, [Score=86.7, Expect=4e-19]} {Smed: dd_Smed_v6_294_0_1, dd_Smed_v6_294_0_1, [RH, Score=160, Expect=8e-47]} {RNA1509_1718} {RNA1310_5438, RNA1509_1718} {RNA1509_1718, RNA815_3481.1}

MligTC455_17471

120

2.49

Mlig455_063075

Neo: Int S/G2/M

Age: -

CDT1

0.959

Mlig455_063075 {REF} {Length: 2566} {TRANSSPLICED} {Pfam: DNA replication factor CDT1 like [PF08839.13, score=88.2]; DNA replication factor Cdt1 C-terminal domain [PF16679.7, score=51.8]} {Human: ENSG00000167513, CDT1, chromatin licensing and DNA replication factor 1, [RH, Score=118, Expect=2e-27]} {Dmel: FBgn0000996, dup, double parked, [RH, Score=79.0, Expect=6e-15]} {RNA1509_15628} {RNA1310_4469.1} {RNA815_17273}