Data search


search
Exact
Search

Results for MligTC455_46683

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46683 545 11.36 Mlig455_022886

Neo: -

Age: -

FEM1B Mlig455_022886 {REF} {Length: 4269} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=112.7]; Ankyrin repeat [PF13606.8, score=83.0]; Ankyrin repeats (many copies) [PF13637.8, score=80.6]; Ankyrin repeat [PF00023.32, score=72.1]; Ankyrin repeats (many copies) [PF13857.8, score=55.7]} {Human: ENSG00000169018, FEM1B, fem-1 homolog B, [RH, Score=455, Expect=8e-151]} {Mouse: ENSMUSG00000032244, Fem1b, feminization 1 homolog b (C. elegans), [RH, Score=455, Expect=6e-151]} {Dmel: FBgn0034542, Fem-1, [RH, Score=318, Expect=4e-98]} {Celegans: WBGene00001411, fem-1, Sex-determining protein fem-1, [Score=214, Expect=4e-60]} {Smed: dd_Smed_v6_4909_0_1, dd_Smed_v6_4909_0_1, [Score=178, Expect=6e-47]} {RNA1509_12339, RNA1509_32621} {RNA1310_9722.1, RNA1509_12339, RNA1509_32621} {RNA1509_12339, RNA1509_32621, RNA815_2857}

Cumulative graph for MligTC455_46683

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.21 3.753 0.27012 0.92104
RegionR2 -0.181 3.753 0.73430 1.00000
RegionR3 -0.145 3.753 0.75617 1.00000
RegionR4 1.012 3.753 0.04754 0.18630
RegionR5 0.328 3.753 0.44685 0.80831
RegionR6 0.533 3.753 0.23341 0.81746
RegionR7 -0.264 3.753 0.64060 1.00000
RegionR8 -0.074 3.753 0.90551 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.988 3.753 0.09942 0.81498
RegenerationR2 0.278 3.753 0.56155 0.89954
RegenerationR3 -0.333 3.753 0.53489 0.87445
RegenerationR4 -0.341 3.753 0.52243 0.88031
RegenerationR5 -0.592 3.753 0.24297 0.67660
RegenerationR6 -0.518 3.753 0.33254 0.67880
RegenerationBL -1.007 3.753 0.11660 0.40420
RegenerationTP 0.351 3.753 0.55618 0.93690


Genes with expression patterns similar to MligTC455_46683

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46683 545 11.36 Mlig455_022886

Neo: -

Age: -

FEM1B 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_022886 {REF} {Length: 4269} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=112.7]; Ankyrin repeat [PF13606.8, score=83.0]; Ankyrin repeats (many copies) [PF13637.8, score=80.6]; Ankyrin repeat [PF00023.32, score=72.1]; Ankyrin repeats (many copies) [PF13857.8, score=55.7]} {Human: ENSG00000169018, FEM1B, fem-1 homolog B, [RH, Score=455, Expect=8e-151]} {Mouse: ENSMUSG00000032244, Fem1b, feminization 1 homolog b (C. elegans), [RH, Score=455, Expect=6e-151]} {Dmel: FBgn0034542, Fem-1, [RH, Score=318, Expect=4e-98]} {Celegans: WBGene00001411, fem-1, Sex-determining protein fem-1, [Score=214, Expect=4e-60]} {Smed: dd_Smed_v6_4909_0_1, dd_Smed_v6_4909_0_1, [Score=178, Expect=6e-47]} {RNA1509_12339, RNA1509_32621} {RNA1310_9722.1, RNA1509_12339, RNA1509_32621} {RNA1509_12339, RNA1509_32621, RNA815_2857}
2. MligTC455_52862 1188 24.74 Mlig455_031929, Mlig455_032668

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.118/0.03771

0.973 - - - - - 0.973

Mlig455_031929 {REF} {Length: 1359} {RNA1509_57987} {RNA1310_20286.1} {RNA815_21366}

Mlig455_032668 {REF} {Length: 1867} {RNA1509_57987} {RNA1310_22434.1, RNA1509_57987} {RNA1509_57987, RNA815_10826}
3. MligTC455_18966 66 1.38 Mlig455_033147

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_033147 {REF} {Length: 1752} {RNA1310_25216} {RNA815_30839}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA