TomoSeq data search

Data search

Results for MligTC455_46743

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_46743	1705	35.51	Mlig455_015481, Mlig455_027889, Mlig455_034286, Mlig455_048553, Mlig455_050953, Mlig455_051925, Mlig455_053341, Mlig455_061825, Mlig455_067191, Mlig455_069791, Mlig455_070452	Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R4: 1.466/0.02808 Regeneration-upregulated R6: 2.349 Regeneration-enriched R6: 2.349		Mlig455_015481 {REF} {Length: 335} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_65851} {RNA815_31711.2} Mlig455_027889 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_034286 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_048553 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_050953 {REF} {Length: 279} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_65851} {RNA815_31711.2} Mlig455_051925 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_053341 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_061825 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_067191 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_069791 {REF} {Length: 323} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_65851} {RNA815_31711.2} Mlig455_070452 {REF} {Length: 331} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_46743

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.768	5.395	0.01378	0.33108
RegionR2	0.275	5.395	0.62877	0.97009
RegionR3	1.022	5.395	0.02199	0.25140
RegionR4	1.466	5.395	0.00360	0.02808
RegionR5	0.962	5.395	0.02306	0.10732
RegionR6	-0.431	5.395	0.38982	0.96433
RegionR7	-0.256	5.395	0.61209	1.00000
RegionR8	-0.269	5.395	0.63673	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.179	5.395	0.92584	1.00000
RegenerationR2	-0.425	5.395	0.41998	0.82734
RegenerationR3	-0.205	5.395	0.70976	0.95139
RegenerationR4	0.178	5.395	0.75481	0.97091
RegenerationR5	0.933	5.395	0.07672	0.43264
RegenerationR6	2.349	5.395	0.00004	0.00482	Specific for R6: 2.349
RegenerationBL	1.55	5.395	0.00234	0.04006
RegenerationTP	2.023	5.395	0.00025	0.02122

Genes with expression patterns similar to MligTC455_46743

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46743	1705	35.51	Mlig455_015481, Mlig455_027889, Mlig455_034286, Mlig455_048553, Mlig455_050953, Mlig455_051925, Mlig455_053341, Mlig455_061825, Mlig455_067191, Mlig455_069791, Mlig455_070452	Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R4: 1.466/0.02808 Regeneration-upregulated R6: 2.349 Regeneration-enriched R6: 2.349		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015481 {REF} {Length: 335} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_65851} {RNA815_31711.2} Mlig455_027889 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_034286 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_048553 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_050953 {REF} {Length: 279} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_65851} {RNA815_31711.2} Mlig455_051925 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_053341 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_061825 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_067191 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2} Mlig455_069791 {REF} {Length: 323} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_65851} {RNA815_31711.2} Mlig455_070452 {REF} {Length: 331} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2}
2.	MligTC455_36296	229	4.78	Mlig455_044528	Neo: - Age: Up-Down-Down	TNS1	1.751	-	-	0.796	0.955	-	-	Mlig455_044528 {REF} {Length: 3702} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=43.8]; Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=26.8]} {Human: ENSG00000079308, TNS1, tensin 1, [Score=69.3, Expect=6e-12]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=70.9, Expect=1e-12]} {Dmel: FBgn0053993, CG33993, [Score=96.7, Expect=2e-22]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=68.6, Expect=5e-12]} {Smed: dd_Smed_v6_7177_0_1, dd_Smed_v6_7177_0_1, [Score=126, Expect=3e-31]} {RNA1509_31201} {RNA1310_21195.1} {RNA815_15661.1}
3.	MligTC455_38964	433	9.02	Mlig455_049691	Neo: Int S/G2/M Age: Down-Up-Down	SRSF11	0.954	-	-	-	0.954	-	-	Mlig455_049691 {REF} {Length: 4541} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=31.1]} {Human: ENSG00000116754, SRSF11, serine and arginine rich splicing factor 11, [RH, Score=99.4, Expect=2e-21]} {Mouse: ENSMUSG00000032621, Srek1, splicing regulatory glutamine/lysine-rich protein 1, [Score=165, Expect=1e-43]} {Dmel: FBgn0024285, Srp54, [RH, Score=156, Expect=5e-41]} {Celegans: WBGene00004704, rsp-7, Probable splicing factor, arginine/serine-rich 7, [Score=105, Expect=4e-24]} {Smed: dd_Smed_v6_5957_0_1, dd_Smed_v6_5957_0_1, [RH, Score=145, Expect=4e-40]} {RNA1509_27257, RNA1509_48641} {RNA1310_15393, RNA1509_27257, RNA1509_48641} {RNA1509_27257, RNA1509_48641, RNA815_14196}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_46743

1705

35.51

Mlig455_015481, Mlig455_027889, Mlig455_034286, Mlig455_048553, Mlig455_050953, Mlig455_051925, Mlig455_053341, Mlig455_061825, Mlig455_067191, Mlig455_069791, Mlig455_070452

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R4: 1.466/0.02808

Regeneration-upregulated R6: 2.349

Regeneration-enriched R6: 2.349

1.000

Mlig455_015481 {REF} {Length: 335} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_65851} {RNA815_31711.2}

Mlig455_027889 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2}

Mlig455_034286 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2}

Mlig455_048553 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2}

Mlig455_050953 {REF} {Length: 279} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_65851} {RNA815_31711.2}

Mlig455_051925 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2}

Mlig455_053341 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2}

Mlig455_061825 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2}

Mlig455_067191 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2}

Mlig455_069791 {REF} {Length: 323} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_65851} {RNA815_31711.2}

Mlig455_070452 {REF} {Length: 331} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21979} {RNA1310_58909.1} {RNA815_31711.2}

MligTC455_36296

229

4.78

Mlig455_044528

Neo: -

Age: Up-Down-Down

TNS1

1.751

0.796

0.955

Mlig455_044528 {REF} {Length: 3702} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=43.8]; Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=26.8]} {Human: ENSG00000079308, TNS1, tensin 1, [Score=69.3, Expect=6e-12]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=70.9, Expect=1e-12]} {Dmel: FBgn0053993, CG33993, [Score=96.7, Expect=2e-22]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=68.6, Expect=5e-12]} {Smed: dd_Smed_v6_7177_0_1, dd_Smed_v6_7177_0_1, [Score=126, Expect=3e-31]} {RNA1509_31201} {RNA1310_21195.1} {RNA815_15661.1}

MligTC455_38964

433

9.02

Mlig455_049691

Neo: Int S/G2/M

Age: Down-Up-Down

SRSF11

0.954

Mlig455_049691 {REF} {Length: 4541} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=31.1]} {Human: ENSG00000116754, SRSF11, serine and arginine rich splicing factor 11, [RH, Score=99.4, Expect=2e-21]} {Mouse: ENSMUSG00000032621, Srek1, splicing regulatory glutamine/lysine-rich protein 1, [Score=165, Expect=1e-43]} {Dmel: FBgn0024285, Srp54, [RH, Score=156, Expect=5e-41]} {Celegans: WBGene00004704, rsp-7, Probable splicing factor, arginine/serine-rich 7, [Score=105, Expect=4e-24]} {Smed: dd_Smed_v6_5957_0_1, dd_Smed_v6_5957_0_1, [RH, Score=145, Expect=4e-40]} {RNA1509_27257, RNA1509_48641} {RNA1310_15393, RNA1509_27257, RNA1509_48641} {RNA1509_27257, RNA1509_48641, RNA815_14196}