TomoSeq data search

Data search

Results for MligTC455_46776

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_46776	38	0.78	Mlig455_052485	Neo: - Age: -		Mlig455_052485 {REF} {Length: 266} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23590} {RNA1310_18290.2} {RNA815_8895}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_46776

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	6.31	0.947	0.02976	0.44455
RegionR2	-0.816	0.947	0.84898	1.00000
RegionR3	-3.139	0.947	0.99951	1.00000
RegionR4	3.197	0.947	0.06071	0.21993
RegionR5	1.2	0.947	0.27015	0.59466
RegionR6	0.37	0.947	0.56085	1.00000
RegionR7	-3.477	0.947	0.99946	1.00000
RegionR8	-3.645	0.947	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.698	0.947	0.22974	0.96015
RegenerationR2	-2.007	0.947	0.25951	0.70627
RegenerationR3	2.514	0.947	0.23265	0.66725
RegenerationR4	-0.772	0.947	0.59976	0.91348
RegenerationR5	0.174	0.947	0.93113	1.00000
RegenerationR6	-0.682	0.947	0.69330	0.92073
RegenerationBL	-0.903	0.947	1.00000	1.00000
RegenerationTP	2.581	0.947	0.41300	0.83906

Genes with expression patterns similar to MligTC455_46776

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46776	38	0.78	Mlig455_052485	Neo: - Age: -		3	1.000	-	1.000	-	-	1.000	Mlig455_052485 {REF} {Length: 266} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23590} {RNA1310_18290.2} {RNA815_8895}
2.	MligTC455_05311	42	0.88	Mlig455_027321, Mlig455_027322, Mlig455_053233, Mlig455_066377	Neo: - Age: -		0.989	-	-	0.989	-	-	-	Mlig455_027321 {REF} {Length: 580} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=66.3]} {Smed: dd_Smed_v6_1574_6_42, dd_Smed_v6_1574_6_42, [Score=63.2, Expect=7e-13]} {RNA1509_48568} {RNA1310_8660.2} {RNA815_17505} Mlig455_027322 {REF} {Length: 1901} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.5]; Integrase zinc binding domain [PF17921.3, score=63.8]; Integrase core domain [PF00665.28, score=38.0]; H2C2 zinc finger [PF09337.12, score=29.3]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=149, Expect=2e-39]} {RNA1509_48568} {RNA1310_43276} Mlig455_053233 {REF} {Length: 7322} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.1]; Prokaryotic RING finger family 4 [PF14447.8, score=23.4]} {RNA1509_48568} {RNA1310_8660.1, RNA1509_48568} {RNA1509_48568, RNA815_17505} Mlig455_066377 {REF} {Length: 5677} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.2]; Prokaryotic RING finger family 4 [PF14447.8, score=23.5]} {RNA1509_48568} {RNA1310_8660.1} {RNA815_17505}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_46776

0.78

Mlig455_052485

Neo: -

Age: -

1.000

Mlig455_052485 {REF} {Length: 266} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23590} {RNA1310_18290.2} {RNA815_8895}

MligTC455_05311

0.88

Mlig455_027321, Mlig455_027322, Mlig455_053233, Mlig455_066377

Neo: -

Age: -

0.989

Mlig455_027321 {REF} {Length: 580} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=66.3]} {Smed: dd_Smed_v6_1574_6_42, dd_Smed_v6_1574_6_42, [Score=63.2, Expect=7e-13]} {RNA1509_48568} {RNA1310_8660.2} {RNA815_17505}

Mlig455_027322 {REF} {Length: 1901} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.5]; Integrase zinc binding domain [PF17921.3, score=63.8]; Integrase core domain [PF00665.28, score=38.0]; H2C2 zinc finger [PF09337.12, score=29.3]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=149, Expect=2e-39]} {RNA1509_48568} {RNA1310_43276}

Mlig455_053233 {REF} {Length: 7322} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.1]; Prokaryotic RING finger family 4 [PF14447.8, score=23.4]} {RNA1509_48568} {RNA1310_8660.1, RNA1509_48568} {RNA1509_48568, RNA815_17505}

Mlig455_066377 {REF} {Length: 5677} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.2]; Prokaryotic RING finger family 4 [PF14447.8, score=23.5]} {RNA1509_48568} {RNA1310_8660.1} {RNA815_17505}