TomoSeq data search

Data search

Results for MligTC455_46829

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_46829	330	6.88	Mlig455_033589, Mlig455_062873	Neo: - Age: -		Mlig455_033589 {REF} {Length: 2325} {RNA1509_23898} {RNA1310_8208.1} {RNA815_686.1} Mlig455_062873 {REF} {Length: 2182} {RNA1509_23898} {RNA1310_8208.1} {RNA815_686.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_46829

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-8.09	3.283	0.03798	0.47787
RegionR2	2.433	3.283	0.06316	0.30364
RegionR3	1.697	3.283	0.11068	0.57916
RegionR4	0.4	3.283	0.70251	0.99086
RegionR5	0.614	3.283	0.56732	0.92603
RegionR6	1.201	3.283	0.27074	0.85992
RegionR7	0.827	3.283	0.47354	1.00000
RegionR8	0.917	3.283	0.47334	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.427	3.283	0.99977	1.00000
RegenerationR2	0.148	3.283	0.87380	1.00000
RegenerationR3	-0.195	3.283	0.85265	0.99908
RegenerationR4	-0.76	3.283	0.47583	0.85646
RegenerationR5	0.485	3.283	0.61681	0.91714
RegenerationR6	0.986	3.283	0.33321	0.67940
RegenerationBL	1.026	3.283	0.27917	0.63991
RegenerationTP	-0.868	3.283	0.49483	0.89797

Genes with expression patterns similar to MligTC455_46829

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46829	330	6.88	Mlig455_033589, Mlig455_062873	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_033589 {REF} {Length: 2325} {RNA1509_23898} {RNA1310_8208.1} {RNA815_686.1} Mlig455_062873 {REF} {Length: 2182} {RNA1509_23898} {RNA1310_8208.1} {RNA815_686.1}
2.	MligTC455_46830	333	6.93	Mlig455_067032, Mlig455_067076	Neo: - Age: Down-Down-Up		5.911	0.989	0.985	0.996	0.971	0.990	0.980	Mlig455_067032 {REF} {Length: 2359} {RNA1509_23898} {RNA1310_8208.1, RNA1509_23898} {RNA1509_23898, RNA815_686.1} Mlig455_067076 {REF} {Length: 2574} {RNA1509_23898} {RNA1310_8208.1} {RNA815_686.1}
3.	MligTC455_52704	159	3.3	Mlig455_005900	Neo: - Age: -	POLL	0.955	-	-	-	-	0.955	-	Mlig455_005900 {REF} {Length: 2808} {TRANSSPLICED} {Pfam: Fingers domain of DNA polymerase lambda [PF10391.11, score=71.7]; Helix-hairpin-helix domain [PF14716.8, score=68.2]; DNA polymerase beta palm [PF14792.8, score=52.7]} {Human: ENSG00000166169, POLL, DNA polymerase lambda, [Score=194, Expect=2e-57]} {Mouse: ENSMUSG00000025218, Poll, polymerase (DNA directed), lambda, [Score=190, Expect=4e-55]} {RNA1509_45857} {RNA1310_11366.1} {RNA815_6646.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_46829

330

6.88

Mlig455_033589, Mlig455_062873

Neo: -

Age: -

1.000

Mlig455_033589 {REF} {Length: 2325} {RNA1509_23898} {RNA1310_8208.1} {RNA815_686.1}

Mlig455_062873 {REF} {Length: 2182} {RNA1509_23898} {RNA1310_8208.1} {RNA815_686.1}

MligTC455_46830

333

6.93

Mlig455_067032, Mlig455_067076

Neo: -

Age: Down-Down-Up

5.911

0.989

0.985

0.996

0.971

0.990

0.980

Mlig455_067032 {REF} {Length: 2359} {RNA1509_23898} {RNA1310_8208.1, RNA1509_23898} {RNA1509_23898, RNA815_686.1}

Mlig455_067076 {REF} {Length: 2574} {RNA1509_23898} {RNA1310_8208.1} {RNA815_686.1}

MligTC455_52704

159

3.3

Mlig455_005900

Neo: -

Age: -

POLL

0.955

Mlig455_005900 {REF} {Length: 2808} {TRANSSPLICED} {Pfam: Fingers domain of DNA polymerase lambda [PF10391.11, score=71.7]; Helix-hairpin-helix domain [PF14716.8, score=68.2]; DNA polymerase beta palm [PF14792.8, score=52.7]} {Human: ENSG00000166169, POLL, DNA polymerase lambda, [Score=194, Expect=2e-57]} {Mouse: ENSMUSG00000025218, Poll, polymerase (DNA directed), lambda, [Score=190, Expect=4e-55]} {RNA1509_45857} {RNA1310_11366.1} {RNA815_6646.1}