Data search


search
Exact
Search

Results for MligTC455_46834

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46834 163 3.39 Mlig455_022859

Neo: -

Age: Up-Down-Up

Mlig455_022859 {REF} {Length: 1504} {RNA1509_50956} {RNA1310_66832} {RNA815_4383.4}

Cumulative graph for MligTC455_46834

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.953 2.41 0.10752 0.68522
RegionR2 0.224 2.41 0.89500 1.00000
RegionR3 0.125 2.41 0.93293 1.00000
RegionR4 1.996 2.41 0.31533 0.63111
RegionR5 2.932 2.41 0.06129 0.21646
RegionR6 1.942 2.41 0.24961 0.83578
RegionR7 0.38 2.41 0.76619 1.00000
RegionR8 0.355 2.41 0.78573 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.071 2.41 0.99999 1.00000
RegenerationR2 2.651 2.41 0.12414 0.54606
RegenerationR3 2.713 2.41 0.13837 0.56406
RegenerationR4 2.901 2.41 0.12470 0.53706
RegenerationR5 1.278 2.41 0.42708 0.81601
RegenerationR6 0.694 2.41 0.77193 0.96320
RegenerationBL 0.43 2.41 0.84150 1.00000
RegenerationTP 0.317 2.41 0.89566 1.00000


Genes with expression patterns similar to MligTC455_46834

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46834 163 3.39 Mlig455_022859

Neo: -

Age: Up-Down-Up

4 - - 1.000 1.000 1.000 1.000 Mlig455_022859 {REF} {Length: 1504} {RNA1509_50956} {RNA1310_66832} {RNA815_4383.4}
2. MligTC455_44046 903 18.81 Mlig455_001040, Mlig455_064249

Neo: -

Age: logFC(26M/2M)=-0.399

CCDC17 2.682 - - - 0.834 0.897 0.951

Mlig455_001040 {REF} {Length: 4786} {TRANSSPLICED} {Human: ENSG00000159588, CCDC17, coiled-coil domain containing 17, [RH, Score=109, Expect=8e-24]} {Mouse: ENSMUSG00000034035, Ccdc17, coiled-coil domain containing 17, [RH, Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_14654_0_1, dd_Smed_v6_14654_0_1, [RH, Score=486, Expect=1e-148]} {RNA1509_31781} {RNA1310_2813.2} {RNA815_3640}

Mlig455_064249 {REF} {Length: 4754} {TRANSSPLICED} {Human: ENSG00000159588, CCDC17, coiled-coil domain containing 17, [RH, Score=109, Expect=7e-24]} {Mouse: ENSMUSG00000034035, Ccdc17, coiled-coil domain containing 17, [RH, Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_14654_0_1, dd_Smed_v6_14654_0_1, [RH, Score=494, Expect=8e-152]} {RNA1509_31781} {RNA1310_2813.2} {RNA815_3640}
3. MligTC455_42733 190 3.96 Mlig455_060196

Neo: -

Age: logFC(26M/2M)=-0.623

SLC22A7 2.601 - - 0.763 0.885 0.953 - Mlig455_060196 {REF} {Length: 2722} {Pfam: Sugar (and other) transporter [PF00083.26, score=94.3]; Major Facilitator Superfamily [PF07690.18, score=70.1]} {Human: ENSG00000137204, SLC22A7, solute carrier family 22 member 7, [Score=125, Expect=3e-30]} {Mouse: ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=124, Expect=7e-30]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=121, Expect=3e-29]} {Dmel: FBgn0034479, CG8654, [Score=115, Expect=2e-27]} {Celegans: WBGene00019408, K05F1.6, [Score=71.6, Expect=5e-13]} {Smed: dd_Smed_v6_1159_0_1, dd_Smed_v6_1159_0_1, [Score=87.8, Expect=2e-18]} {RNA1509_11814} {RNA1310_15619.1} {RNA815_5783.2}
4. MligTC455_37751 204 4.25 Mlig455_014157

Neo: -

Age: Up-Down-Down

Region-enriched R2: 2.173/0.03490

NWD2 2.537 - - 0.842 0.738 - 0.957 Mlig455_014157 {REF} {Length: 7240} {TRANSSPLICED} {Pfam: AAA ATPase domain [PF13191.8, score=40.0]; NACHT domain [PF05729.14, score=36.6]; Dpy-30 motif [PF05186.15, score=33.2]; AAA domain [PF13401.8, score=32.6]; Domain of unknown function (DUF4062) [PF13271.8, score=22.0]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=402, Expect=6e-114]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=395, Expect=8e-112]} {Dmel: FBgn0038397, CG10185, [Score=526, Expect=2e-156]} {Celegans: WBGene00020254, T05C3.2, [Score=521, Expect=2e-154]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=292, Expect=2e-79]} {RNA1509_7024} {RNA1310_383.1, RNA1509_7024} {RNA1509_7024, RNA815_188}
5. MligTC455_47975 31 0.64 Mlig455_018682, Mlig455_043427

Neo: -

Age: Up-Down-Down

ISL1 1.88 - - - 0.951 0.929 -

Mlig455_018682 {REF} {Length: 3387} {Pfam: LIM domain [PF00412.24, score=95.5]; Homeodomain [PF00046.31, score=55.3]; Homeobox KN domain [PF05920.13, score=23.7]} {Human: ENSG00000016082, ISL1, ISL LIM homeobox 1, [Score=202, Expect=6e-60]} {Mouse: ENSMUSG00000042258, Isl1, ISL1 transcription factor, LIM/homeodomain, [Score=202, Expect=4e-60]} {Dmel: FBgn0003896, tup, tailup, [RH, Score=178, Expect=3e-49]} {Celegans: WBGene00002989, lim-7, CeLIM-7; LIM domain family, [RH, Score=228, Expect=5e-69]} {Smed: dd_Smed_v6_8820_0_1, dd_Smed_v6_8820_0_1, [Score=320, Expect=1e-103]} {RNA1310_20628} {RNA815_37694}

Mlig455_043427 {REF} {Length: 3365} {Pfam: LIM domain [PF00412.24, score=77.4]; Homeodomain [PF00046.31, score=53.3]; Homeobox KN domain [PF05920.13, score=21.8]} {Human: ENSG00000016082, ISL1, ISL LIM homeobox 1, [Score=167, Expect=2e-46]} {Mouse: ENSMUSG00000042258, Isl1, ISL1 transcription factor, LIM/homeodomain, [Score=167, Expect=1e-46]; ENSMUSG00000032318, Isl2, insulin related protein 2 (islet 2), [Score=160, Expect=4e-44]} {Dmel: FBgn0003896, tup, tailup, [Score=144, Expect=1e-37]} {Celegans: WBGene00002989, lim-7, CeLIM-7; LIM domain family, [Score=204, Expect=6e-60]} {Smed: dd_Smed_v6_8820_0_1, dd_Smed_v6_8820_0_1, [Score=274, Expect=7e-86]} {RNA1310_20628} {RNA815_37694}
6. MligTC455_34896 906 18.87 Mlig455_041044, Mlig455_070071

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.259

Region-enriched R2: 2.266/0.02183

1.836 - - - 0.955 0.881 -

Mlig455_041044 {REF} {Length: 7002} {TRANSSPLICED} {Pfam: Fibronectin type III domain [PF00041.23, score=34.4]; Scramblase [PF03803.17, score=18.5]} {Smed: dd_Smed_v6_66647_0_1, dd_Smed_v6_66647_0_1, [Score=113, Expect=8e-28]} {RNA1509_18182} {RNA1310_652.1} {RNA815_333}

Mlig455_070071 {REF} {Length: 6980} {TRANSSPLICED} {Pfam: Fibronectin type III domain [PF00041.23, score=34.6]; Scramblase [PF03803.17, score=18.4]} {Smed: dd_Smed_v6_66647_0_1, dd_Smed_v6_66647_0_1, [Score=113, Expect=8e-28]} {RNA1509_18182} {RNA1310_652.1} {RNA815_333}
7. MligTC455_49223 194 4.04 Mlig455_051164

Neo: -

Age: -

1.694 - - 0.955 0.739 - - Mlig455_051164 {REF} {Length: 1528} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=98.2, Expect=3e-24]} {RNA1509_45032} {RNA1310_28402} {RNA815_16677}
8. MligTC455_30298 374 7.79 Mlig455_043411, Mlig455_043553

Neo: -

Age: -

1.683 - - - 0.727 0.956 -

Mlig455_043411 {REF} {Length: 5334} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=68.9]; Tetratricopeptide repeat [PF13181.8, score=29.2]; AAA ATPase domain [PF13191.8, score=26.2]; Tetratricopeptide repeat [PF07719.19, score=26.0]; Tetratricopeptide repeat [PF14559.8, score=25.5]; Tetratricopeptide repeat [PF00515.30, score=24.6]; NACHT domain [PF05729.14, score=23.4]; Tetratricopeptide repeat [PF13374.8, score=21.8]} {Mouse: ENSMUSG00000044937, Ttc41, tetratricopeptide repeat domain 41, [Score=133, Expect=1e-30]} {Smed: dd_Smed_v6_12326_0_4, dd_Smed_v6_12326_0_4, [Score=203, Expect=9e-53]} {RNA1509_11012} {RNA1310_2964, RNA1509_11012} {RNA1509_11012, RNA815_1508.1}

Mlig455_043553 {REF} {Length: 5340} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=68.0]; Tetratricopeptide repeat [PF13181.8, score=28.2]; AAA ATPase domain [PF13191.8, score=26.2]; Tetratricopeptide repeat [PF00515.30, score=25.3]; Tetratricopeptide repeat [PF14559.8, score=25.2]; Tetratricopeptide repeat [PF07719.19, score=24.6]; NACHT domain [PF05729.14, score=23.0]; Tetratricopeptide repeat [PF13374.8, score=21.0]; Zeta toxin [PF06414.14, score=20.0]} {Mouse: ENSMUSG00000044937, Ttc41, tetratricopeptide repeat domain 41, [RH, Score=187, Expect=1e-47]} {Smed: dd_Smed_v6_12326_0_3, dd_Smed_v6_12326_0_3, [RH, Score=218, Expect=3e-57]} {RNA1509_11012} {RNA1310_2964} {RNA815_1508.1}
9. MligTC455_30297 190 3.95 Mlig455_043386

Neo: -

Age: -

1.675 - - - 0.716 0.959 - Mlig455_043386 {REF} {Length: 3325} {Pfam: Tetratricopeptide repeat [PF13424.8, score=72.0]; Tetratricopeptide repeat [PF13181.8, score=32.7]; Tetratricopeptide repeat [PF07719.19, score=29.8]; Tetratricopeptide repeat [PF00515.30, score=29.6]; Tetratricopeptide repeat [PF14559.8, score=27.0]; Tetratricopeptide repeat [PF13374.8, score=24.9]; Tetratricopeptide repeat [PF13428.8, score=20.2]; Tetratricopeptide repeat [PF13432.8, score=19.8]} {Smed: dd_Smed_v6_12326_0_3, dd_Smed_v6_12326_0_3, [Score=87.0, Expect=3e-17]} {RNA1509_11012} {RNA1310_2964} {RNA815_1508.1}
10. MligTC455_25742 492 10.26 Mlig455_024643

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_024643 {REF} {Length: 2834} {RNA1509_10912} {RNA1310_6828} {RNA815_16823}
11. MligTC455_21942 54 1.12 Mlig455_040670

Neo: -

Age: -

0.961 - - - - 0.961 - Mlig455_040670 {REF} {Length: 1501} {RNA1509_21400} {RNA1310_43853} {RNA815_2733.1}
12. MligTC455_51290 43 0.9 Mlig455_031006

Neo: Int S/G2/M

Age: -

0.96 - - - 0.960 - - Mlig455_031006 {REF} {Length: 2062} {TRANSSPLICED} {Pfam: Transmembrane family 220, helix [PF15071.8, score=75.0]; 7TM diverse intracellular signalling [PF07695.13, score=19.4]} {RNA1509_52987} {RNA1310_37259} {RNA815_33266.1}
13. MligTC455_10948 24 0.49 Mlig455_009927

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.517

BRAF 0.956 - - - - 0.956 - Mlig455_009927 {REF} {Length: 1474} {Pfam: Protein kinase domain [PF00069.27, score=64.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=54.5]; Fungal protein kinase [PF17667.3, score=31.1]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [Score=57.8, Expect=1e-09]; ENSG00000134602, STK26, serine/threonine kinase 26, [Score=57.4, Expect=2e-09]; ENSG00000132155, RAF1, Raf-1 proto-oncogene, serine/threonine kinase, [Score=57.0, Expect=4e-09]; ENSG00000198648, STK39, serine/threonine kinase 39, [Score=56.2, Expect=7e-09]; ENSG00000087095, NLK, nemo like kinase, [Score=55.8, Expect=8e-09]; ENSG00000134853, PDGFRA, platelet derived growth factor receptor alpha, [Score=55.5, Expect=1e-08]; ENSG00000173846, PLK3, polo like kinase 3, [Score=55.5, Expect=1e-08]} {Mouse: ENSMUSG00000002413, Braf, Braf transforming gene, [Score=57.4, Expect=2e-09]; ENSMUSG00000000441, Raf1, v-raf-leukemia viral oncogene 1, [Score=56.6, Expect=3e-09]; ENSMUSG00000027030, Stk39, serine/threonine kinase 39, [Score=56.2, Expect=5e-09]; ENSMUSG00000017376, Nlk, nemo like kinase, [Score=55.8, Expect=6e-09]; ENSMUSG00000029231, Pdgfra, platelet derived growth factor receptor, alpha polypeptide, [Score=55.1, Expect=1e-08]} {Dmel: FBgn0026323, Tak1, TGF-beta activated kinase 1, [Score=63.5, Expect=1e-11]} {Celegans: WBGene00006971, zak-1, Mammalian ZAK kinase homolog, [Score=67.0, Expect=6e-13]} {Smed: dd_Smed_v6_2589_0_2, dd_Smed_v6_2589_0_2, [Score=72.0, Expect=7e-15]} {RNA1509_47040} {RNA1310_12789} {RNA815_5890.1}
14. MligTC455_29680 83 1.72 Mlig455_027716

Neo: -

Age: -

ANKRD50 0.956 - - - - 0.956 - Mlig455_027716 {REF} {Length: 7650} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=171.6]; Ankyrin repeats (many copies) [PF13637.8, score=149.2]; Ankyrin repeats (many copies) [PF13857.8, score=108.0]; Ankyrin repeat [PF13606.8, score=106.1]; Ankyrin repeat [PF00023.32, score=94.5]; Mab-21 protein [PF03281.16, score=41.2]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=151, Expect=4e-36]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=151, Expect=4e-36]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=130, Expect=7e-30]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=119, Expect=2e-26]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=125, Expect=1e-28]} {RNA1509_27730, RNA1509_53035} {RNA1310_7057.1, RNA1509_53035} {RNA1509_53035, RNA815_2426.1}
15. MligTC455_19706 198 4.12 Mlig455_049566

Neo: Int S/G2/M

Age: -

DNA2 0.955 - - 0.955 - - - Mlig455_049566 {REF} {Length: 5005} {TRANSSPLICED} {Pfam: AAA domain [PF13087.8, score=141.8]; DNA replication factor Dna2 [PF08696.13, score=130.0]; AAA domain [PF13086.8, score=117.0]; AAA domain [PF13604.8, score=53.2]; AAA domain [PF13245.8, score=31.7]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=20.1]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=19.6]; AAA domain [PF13481.8, score=18.3]} {Human: ENSG00000138346, DNA2, DNA replication helicase/nuclease 2, [RH, Score=411, Expect=2e-124]} {Mouse: ENSMUSG00000036875, Dna2, DNA replication helicase/nuclease 2, [RH, Score=416, Expect=2e-126]} {Dmel: FBgn0030170, CG2990, [RH, Score=364, Expect=3e-107]} {Celegans: WBGene00001016, dna-2, Yeast DNA helicase/endonuclease family, [RH, Score=351, Expect=7e-103]} {Smed: dd_Smed_v6_12638_0_1, dd_Smed_v6_12638_0_1, [RH, Score=404, Expect=1e-121]} {RNA1509_15095} {RNA1310_5852, RNA1509_15095} {RNA1509_15095, RNA815_1653.1}
16. MligTC455_00424 22 0.45 Mlig455_045233

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_045233 {REF} {Length: 575} {RNA1310_21871} {RNA815_32300}
17. MligTC455_26939 72 1.49 Mlig455_033291

Neo: -

Age: -

0.953 - - - 0.953 - - Mlig455_033291 {REF} {Length: 6212} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.0]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=71.6, Expect=4e-13]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}
18. MligTC455_20117 82 1.71 Mlig455_050132

Neo: -

Age: Up-Down-Up

0.951 - - - 0.951 - - Mlig455_050132 {REF} {Length: 2853} {RNA1509_49333} {RNA1310_10123} {RNA815_12004}
19. MligTC455_38855 46 0.96 Mlig455_027537

Neo: -

Age: -

0.951 - - - 0.951 - - Mlig455_027537 {REF} {Length: 1970} {RNA1509_39463} {RNA1310_38908} {RNA815_20678}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA