TomoSeq data search

Data search

Results for MligTC455_46842

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46842

3170

66.04

Mlig455_017304

Neo: -

Age: Down-Down-Up

NAGA

Mlig455_017304 {REF} {Length: 1843} {TRANSSPLICED} {Pfam: Alpha galactosidase A [PF16499.7, score=416.2]; Alpha galactosidase A C-terminal beta sandwich domain [PF17450.4, score=28.1]; Melibiase [PF02065.20, score=25.4]} {Human: ENSG00000198951, NAGA, alpha-N-acetylgalactosaminidase, [RH, Score=350, Expect=2e-117]; ENSG00000102393, GLA, galactosidase alpha, [RH, Score=335, Expect=4e-111]} {Mouse: ENSMUSG00000022453, Naga, N-acetyl galactosaminidase, alpha, [RH, Score=346, Expect=5e-116]} {Dmel: FBgn0032192, CG5731, [RH, Score=361, Expect=7e-122]} {Celegans: WBGene00011095, gana-1, GAlactosidase/N-Acetylgalactosaminidase, [RH, Score=311, Expect=4e-102]} {Smed: dd_Smed_v6_606_0_2, dd_Smed_v6_606_0_2, [RH, Score=376, Expect=6e-128]} {RNA1509_18330, RNA1509_4952} {RNA1310_15758.1, RNA1509_18330} {RNA1509_18330, RNA815_6215.1}

Cumulative graph for MligTC455_46842

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.943	6.209	0.09586	0.65902
RegionR2	-0.435	6.209	0.12024	0.42917
RegionR3	0.54	6.209	0.01179	0.17100
RegionR4	0.065	6.209	0.79313	1.00000
RegionR5	0.558	6.209	0.00478	0.03349
RegionR6	0.275	6.209	0.21194	0.78966
RegionR7	-0.181	6.209	0.52025	1.00000
RegionR8	0.121	6.209	0.71712	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.994	6.209	0.16133	0.90401
RegenerationR2	-0.087	6.209	0.73486	0.96762
RegenerationR3	-0.301	6.209	0.23849	0.67287
RegenerationR4	0.192	6.209	0.45655	0.84507
RegenerationR5	0.083	6.209	0.73495	0.96606
RegenerationR6	0.068	6.209	0.79201	0.97354
RegenerationBL	-0.202	6.209	0.48981	0.85481
RegenerationTP	-0.399	6.209	0.22054	0.66400

Genes with expression patterns similar to MligTC455_46842

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46842	3170	66.04	Mlig455_017304	Neo: - Age: Down-Down-Up	NAGA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017304 {REF} {Length: 1843} {TRANSSPLICED} {Pfam: Alpha galactosidase A [PF16499.7, score=416.2]; Alpha galactosidase A C-terminal beta sandwich domain [PF17450.4, score=28.1]; Melibiase [PF02065.20, score=25.4]} {Human: ENSG00000198951, NAGA, alpha-N-acetylgalactosaminidase, [RH, Score=350, Expect=2e-117]; ENSG00000102393, GLA, galactosidase alpha, [RH, Score=335, Expect=4e-111]} {Mouse: ENSMUSG00000022453, Naga, N-acetyl galactosaminidase, alpha, [RH, Score=346, Expect=5e-116]} {Dmel: FBgn0032192, CG5731, [RH, Score=361, Expect=7e-122]} {Celegans: WBGene00011095, gana-1, GAlactosidase/N-Acetylgalactosaminidase, [RH, Score=311, Expect=4e-102]} {Smed: dd_Smed_v6_606_0_2, dd_Smed_v6_606_0_2, [RH, Score=376, Expect=6e-128]} {RNA1509_18330, RNA1509_4952} {RNA1310_15758.1, RNA1509_18330} {RNA1509_18330, RNA815_6215.1}
2.	MligTC455_35746	1154	24.04	Mlig455_043889	Neo: - Age: -	PDXK	1.819	-	-	-	0.964	-	0.855	Mlig455_043889 {REF} {Length: 3962} {TRANSSPLICED} {Pfam: pfkB family carbohydrate kinase [PF00294.26, score=32.4]; Phosphomethylpyrimidine kinase [PF08543.14, score=27.2]} {Human: ENSG00000160209, PDXK, pyridoxal kinase, [RH, Score=247, Expect=2e-80]} {Mouse: ENSMUSG00000032788, Pdxk, pyridoxal (pyridoxine, vitamin B6) kinase, [RH, Score=246, Expect=9e-80]} {Dmel: FBgn0085484, Pdxk, Pyridoxal kinase, [RH, Score=205, Expect=3e-64]} {Celegans: WBGene00019008, pdxk-1, Putative pyridoxal kinase, [RH, Score=239, Expect=2e-77]} {Smed: dd_Smed_v6_6613_0_1, dd_Smed_v6_6613_0_1, [RH, Score=227, Expect=7e-73]} {RNA1509_20307, RNA1509_7482} {RNA1310_17446.1, RNA1509_20307, RNA1509_7482} {RNA1509_20307, RNA1509_7482, RNA815_12952}
3.	MligTC455_46843	909	18.94	Mlig455_045276	Neo: - Age: -	NAGA	0.962	-	-	-	0.962	-	-	Mlig455_045276 {REF} {Length: 1834} {TRANSSPLICED} {Pfam: Alpha galactosidase A [PF16499.7, score=416.2]; Alpha galactosidase A C-terminal beta sandwich domain [PF17450.4, score=31.3]; Melibiase [PF02065.20, score=25.4]} {Human: ENSG00000198951, NAGA, alpha-N-acetylgalactosaminidase, [RH, Score=351, Expect=9e-118]; ENSG00000102393, GLA, galactosidase alpha, [RH, Score=336, Expect=1e-111]} {Mouse: ENSMUSG00000022453, Naga, N-acetyl galactosaminidase, alpha, [RH, Score=347, Expect=2e-116]} {Dmel: FBgn0034117, CG7997, [RH, Score=363, Expect=1e-122]} {Celegans: WBGene00011095, gana-1, GAlactosidase/N-Acetylgalactosaminidase, [RH, Score=313, Expect=8e-103]} {Smed: dd_Smed_v6_606_0_2, dd_Smed_v6_606_0_2, [RH, Score=377, Expect=4e-128]} {RNA1509_10858, RNA1509_4952} {RNA1310_15758.1, RNA1509_10858, RNA1509_4952} {RNA1509_10858, RNA1509_4952, RNA815_6215.1}
4.	MligTC455_29669	1326	27.62	Mlig455_030344	Neo: - Age: -	AL031281.2	0.957	-	-	-	0.957	-	-	Mlig455_030344 {REF} {Length: 1679} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=187.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=68.8]; ADP-ribosylation factor family [PF00025.23, score=26.5]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [RH, Score=333, Expect=1e-117]; ENSG00000070831, CDC42, cell division cycle 42, [RH, Score=333, Expect=1e-117]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [RH, Score=333, Expect=7e-118]} {Dmel: FBgn0010341, Cdc42, [RH, Score=333, Expect=3e-118]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [RH, Score=327, Expect=6e-116]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [RH, Score=330, Expect=5e-117]} {RNA1509_22880, RNA1509_23942, RNA1509_41808, RNA1509_6438} {RNA1310_18351, RNA1509_22880, RNA1509_23942, RNA1509_41808, RNA1509_6438} {RNA1509_22880, RNA1509_23942, RNA1509_41808, RNA1509_6438, RNA815_7783}
5.	MligTC455_36861	3511	73.15	Mlig455_025106	Neo: - Age: logFC(26M/2M)=0.167	RCN1	0.955	-	-	-	-	0.955	-	Mlig455_025106 {REF} {Length: 1382} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=71.3]; EF hand [PF13202.8, score=65.9]; EF-hand domain pair [PF13499.8, score=54.8]; EF-hand domain [PF13405.8, score=52.7]; EF-hand domain pair [PF13833.8, score=42.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.2]} {Human: ENSG00000049449, RCN1, reticulocalbin 1, [RH, Score=253, Expect=6e-82]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [RH, Score=260, Expect=3e-85]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=233, Expect=8e-75]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [RH, Score=240, Expect=7e-78]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=238, Expect=4e-77]} {RNA1509_3129, RNA1509_40637, RNA1509_9840} {RNA1310_23715.1, RNA1509_3129, RNA1509_40637, RNA1509_9840} {RNA1509_3129, RNA1509_40637, RNA1509_9840, RNA815_10048}
6.	MligTC455_50153	477	9.93	Mlig455_061605	Neo: - Age: -	BDH1	0.954	-	-	-	0.954	-	-	Mlig455_061605 {REF} {Length: 1818} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=138.9]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=92.3]; KR domain [PF08659.12, score=19.8]} {Human: ENSG00000161267, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=170, Expect=5e-49]; ENSG00000275544, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=170, Expect=5e-49]; ENSG00000025423, HSD17B6, hydroxysteroid 17-beta dehydrogenase 6, [Score=163, Expect=9e-47]} {Mouse: ENSMUSG00000046598, Bdh1, 3-hydroxybutyrate dehydrogenase, type 1, [Score=173, Expect=2e-50]} {Dmel: FBgn0033679, CG8888, [RH, Score=108, Expect=4e-26]} {Celegans: WBGene00000979, dhs-16, 3 beta-hydroxysteroid dehydrogenase dhs-16, [Score=135, Expect=7e-36]} {Smed: dd_Smed_v6_8012_0_1, dd_Smed_v6_8012_0_1, [RH, Score=147, Expect=5e-41]} {RNA1509_18804, RNA1509_53392} {RNA1310_15769, RNA1509_18804, RNA1509_53392} {RNA1509_18804, RNA1509_53392, RNA815_8900.1}

Berezikov Lab - 2020-2021 © ERIBA