Data search


search
Exact
Search

Results for MligTC455_46862

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46862 2957 61.60 Mlig455_009810

Neo: -

Age: logFC(26M/2M)=0.314

FADS3 Mlig455_009810 {REF} {Length: 3545} {TRANSSPLICED} {Pfam: Fatty acid desaturase [PF00487.26, score=126.6]; Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=54.4]} {Human: ENSG00000221968, FADS3, fatty acid desaturase 3, [Score=157, Expect=2e-42]} {Mouse: ENSMUSG00000024664, Fads3, fatty acid desaturase 3, [Score=158, Expect=7e-43]; ENSMUSG00000075217, 4833423E24Rik, RIKEN cDNA 4833423E24 gene, [Score=154, Expect=3e-41]} {Celegans: WBGene00001395, fat-3, Delta(6)-fatty-acid desaturase fat-3, [RH, Score=150, Expect=3e-40]} {Smed: dd_Smed_v6_10869_0_1, dd_Smed_v6_10869_0_1, [Score=135, Expect=5e-35]} {RNA1509_1680, RNA1509_21929, RNA1509_35391, RNA1509_48732, RNA1509_49370} {RNA1310_9804, RNA1509_1680, RNA1509_21929, RNA1509_35391, RNA1509_48732, RNA1509_49370} {RNA1509_1680, RNA1509_21929, RNA1509_35391, RNA1509_48732, RNA1509_49370, RNA815_3791}

Cumulative graph for MligTC455_46862

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.223 6.11 0.71449 1.00000
RegionR2 -0.091 6.11 0.74428 1.00000
RegionR3 0.244 6.11 0.26629 0.81082
RegionR4 0.607 6.11 0.02307 0.11265
RegionR5 0.376 6.11 0.06618 0.22894
RegionR6 0.183 6.11 0.42062 0.98802
RegionR7 -0.952 6.11 0.00236 0.06416
RegionR8 -0.144 6.11 0.67863 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.074 6.11 0.92640 1.00000
RegenerationR2 -0.007 6.11 0.97636 1.00000
RegenerationR3 0.023 6.11 0.93165 1.00000
RegenerationR4 -0.103 6.11 0.70450 0.95542
RegenerationR5 -0.161 6.11 0.51775 0.86833
RegenerationR6 0.231 6.11 0.37386 0.71617
RegenerationBL 0.044 6.11 0.88343 1.00000
RegenerationTP 0.004 6.11 0.99042 1.00000


Genes with expression patterns similar to MligTC455_46862

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46862 2957 61.6 Mlig455_009810

Neo: -

Age: logFC(26M/2M)=0.314

FADS3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_009810 {REF} {Length: 3545} {TRANSSPLICED} {Pfam: Fatty acid desaturase [PF00487.26, score=126.6]; Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=54.4]} {Human: ENSG00000221968, FADS3, fatty acid desaturase 3, [Score=157, Expect=2e-42]} {Mouse: ENSMUSG00000024664, Fads3, fatty acid desaturase 3, [Score=158, Expect=7e-43]; ENSMUSG00000075217, 4833423E24Rik, RIKEN cDNA 4833423E24 gene, [Score=154, Expect=3e-41]} {Celegans: WBGene00001395, fat-3, Delta(6)-fatty-acid desaturase fat-3, [RH, Score=150, Expect=3e-40]} {Smed: dd_Smed_v6_10869_0_1, dd_Smed_v6_10869_0_1, [Score=135, Expect=5e-35]} {RNA1509_1680, RNA1509_21929, RNA1509_35391, RNA1509_48732, RNA1509_49370} {RNA1310_9804, RNA1509_1680, RNA1509_21929, RNA1509_35391, RNA1509_48732, RNA1509_49370} {RNA1509_1680, RNA1509_21929, RNA1509_35391, RNA1509_48732, RNA1509_49370, RNA815_3791}
2. MligTC455_24057 1295 26.97 Mlig455_065274

Neo: -

Age: -

NDUFS1 0.951 - - - 0.951 - - Mlig455_065274 {REF} {Length: 2813} {TRANSSPLICED} {Pfam: Molybdopterin oxidoreductase [PF00384.24, score=206.1]; 2Fe-2S iron-sulfur cluster binding domain [PF13510.8, score=69.7]; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region [PF10588.11, score=56.4]; NADH-ubiquinone oxidoreductase subunit G, C-terminal [PF09326.13, score=55.9]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=31.5]} {Human: ENSG00000023228, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [RH, Score=953, Expect=0.0]; ENSG00000283447, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [RH, Score=953, Expect=0.0]} {Mouse: ENSMUSG00000025968, Ndufs1, NADH:ubiquinone oxidoreductase core subunit S1, [RH, Score=943, Expect=0.0]} {Dmel: FBgn0017566, ND-75, NADH dehydrogenase (ubiquinone) 75 kDa subunit, [RH, Score=895, Expect=0.0]} {Celegans: WBGene00021562, nuo-5, NADH Ubiquinone Oxidoreductase, [RH, Score=825, Expect=0.0]} {Smed: dd_Smed_v6_2402_0_1, dd_Smed_v6_2402_0_1, [RH, Score=928, Expect=0.0]} {RNA1509_1870, RNA1509_32096, RNA1509_43626, RNA1509_8925} {RNA1310_6597, RNA1509_1870, RNA1509_32096, RNA1509_43626, RNA1509_8925} {RNA1509_1870, RNA1509_32096, RNA1509_43626, RNA1509_8925, RNA815_1467.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA