TomoSeq data search

Data search

Results for MligTC455_46898

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_46898	304	6.34	Mlig455_000956	Neo: - Age: -	RNF150	Mlig455_000956 {REF} {Length: 3680} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=40.9]; RING-H2 zinc finger domain [PF12678.9, score=34.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.2]; RING-like zinc finger [PF17123.7, score=28.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.2]; zinc-RING finger domain [PF14634.8, score=22.2]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=20.4]; RING-type zinc-finger [PF13445.8, score=19.3]} {Human: ENSG00000170153, RNF150, ring finger protein 150, [Score=161, Expect=1e-45]} {Mouse: ENSMUSG00000047747, Rnf150, ring finger protein 150, [Score=162, Expect=1e-44]} {Dmel: FBgn0004919, gol, goliath, [Score=155, Expect=4e-42]} {Celegans: WBGene00019185, H10E21.5, [Score=168, Expect=1e-46]} {Smed: dd_Smed_v6_7396_0_1, dd_Smed_v6_7396_0_1, [Score=187, Expect=6e-52]} {RNA1509_24402, RNA1509_41976} {RNA1310_20492, RNA1509_24402, RNA1509_41976} {RNA1509_24402, RNA1509_41976, RNA815_11884}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46898

304

6.34

Mlig455_000956

Neo: -

Age: -

RNF150

Mlig455_000956 {REF} {Length: 3680} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=40.9]; RING-H2 zinc finger domain [PF12678.9, score=34.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.2]; RING-like zinc finger [PF17123.7, score=28.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.2]; zinc-RING finger domain [PF14634.8, score=22.2]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=20.4]; RING-type zinc-finger [PF13445.8, score=19.3]} {Human: ENSG00000170153, RNF150, ring finger protein 150, [Score=161, Expect=1e-45]} {Mouse: ENSMUSG00000047747, Rnf150, ring finger protein 150, [Score=162, Expect=1e-44]} {Dmel: FBgn0004919, gol, goliath, [Score=155, Expect=4e-42]} {Celegans: WBGene00019185, H10E21.5, [Score=168, Expect=1e-46]} {Smed: dd_Smed_v6_7396_0_1, dd_Smed_v6_7396_0_1, [Score=187, Expect=6e-52]} {RNA1509_24402, RNA1509_41976} {RNA1310_20492, RNA1509_24402, RNA1509_41976} {RNA1509_24402, RNA1509_41976, RNA815_11884}

Cumulative graph for MligTC455_46898

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.708	3.071	0.56169	1.00000
RegionR2	1.232	3.071	0.04459	0.24830
RegionR3	-0.028	3.071	0.95328	1.00000
RegionR4	-1.328	3.071	0.03424	0.14920
RegionR5	-0.385	3.071	0.32255	0.66487
RegionR6	0.497	3.071	0.25670	0.84258
RegionR7	-0.373	3.071	0.57635	1.00000
RegionR8	-0.323	3.071	0.68955	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.817	3.071	0.37855	1.00000
RegenerationR2	0.325	3.071	0.49188	0.86823
RegenerationR3	1.402	3.071	0.01033	0.18631
RegenerationR4	1.228	3.071	0.04870	0.35588
RegenerationR5	1.166	3.071	0.01909	0.23934
RegenerationR6	-0.183	3.071	0.78538	0.97017
RegenerationBL	0.29	3.071	0.76363	1.00000
RegenerationTP	0.864	3.071	0.28066	0.72836

Genes with expression patterns similar to MligTC455_46898

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46898	304	6.34	Mlig455_000956	Neo: - Age: -	RNF150	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000956 {REF} {Length: 3680} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=40.9]; RING-H2 zinc finger domain [PF12678.9, score=34.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.2]; RING-like zinc finger [PF17123.7, score=28.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.2]; zinc-RING finger domain [PF14634.8, score=22.2]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=20.4]; RING-type zinc-finger [PF13445.8, score=19.3]} {Human: ENSG00000170153, RNF150, ring finger protein 150, [Score=161, Expect=1e-45]} {Mouse: ENSMUSG00000047747, Rnf150, ring finger protein 150, [Score=162, Expect=1e-44]} {Dmel: FBgn0004919, gol, goliath, [Score=155, Expect=4e-42]} {Celegans: WBGene00019185, H10E21.5, [Score=168, Expect=1e-46]} {Smed: dd_Smed_v6_7396_0_1, dd_Smed_v6_7396_0_1, [Score=187, Expect=6e-52]} {RNA1509_24402, RNA1509_41976} {RNA1310_20492, RNA1509_24402, RNA1509_41976} {RNA1509_24402, RNA1509_41976, RNA815_11884}
2.	MligTC455_30533	175	3.66	Mlig455_011508	Neo: - Age: logFC(26M/2M)=-0.396	ODF2	0.961	-	-	-	0.961	-	-	Mlig455_011508 {REF} {Length: 3294} {TRANSSPLICED} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [Score=109, Expect=5e-24]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_3609_0_2, dd_Smed_v6_3609_0_2, [Score=89.4, Expect=3e-18]} {RNA1509_12480} {RNA1310_8290} {RNA815_8319}
3.	MligTC455_40508	42	0.88	Mlig455_041263, Mlig455_053074	Neo: - Age: Up-Down-Up		0.961	-	-	-	0.961	-	-	Mlig455_041263 {REF} {Length: 3567} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=22.8]; Ankyrin repeats (many copies) [PF13637.8, score=21.5]} {RNA1310_40323} {RNA815_53708} Mlig455_053074 {REF} {Length: 6700} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=21.1]; Ankyrin repeats (3 copies) [PF12796.9, score=20.3]} {RNA1310_40323} {RNA815_53708}
4.	MligTC455_49129	26	0.53	Mlig455_063694	Neo: - Age: - Region-enriched R4: 6.806/0.00453		0.959	-	-	0.959	-	-	-	Mlig455_063694 {REF} {Length: 673} {RNA1310_49755} {RNA815_37218}
5.	MligTC455_14963	43	0.89	Mlig455_051125	Neo: - Age: Down-Down-Up		0.956	-	-	-	-	0.956	-	Mlig455_051125 {REF} {Length: 1630} {RNA1310_22097} {RNA815_36852}
6.	MligTC455_36489	39	0.82	Mlig455_068144	Neo: - Age: logFC(26M/2M)=-0.470		0.954	-	-	-	-	0.954	-	Mlig455_068144 {REF} {Length: 5372} {Smed: dd_Smed_v6_10509_0_1, dd_Smed_v6_10509_0_1, [Score=99.4, Expect=1e-21]} {RNA1509_10683, RNA1509_45649} {RNA1310_7527.1, RNA1509_10683, RNA1509_45649} {RNA1509_10683, RNA1509_45649, RNA815_3700.1}