Data search
Results for MligTC455_46985
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46985 | 3046 | 63.47 | Mlig455_023482, Mlig455_068117 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.481 Region-enriched R5: 1.012/0.00920 |
NMD3 | Mlig455_023482 {REF} {Length: 1700} {TRANSSPLICED} {Pfam: NMD3 family [PF04981.15, score=239.3]} {Human: ENSG00000169251, NMD3, NMD3 ribosome export adaptor, [RH, Score=456, Expect=9e-157]} {Mouse: ENSMUSG00000027787, Nmd3, NMD3 ribosome export adaptor, [RH, Score=452, Expect=4e-155]} {Dmel: FBgn0023542, Nmd3, Nonsense-mediated mRNA 3, [RH, Score=429, Expect=3e-146]} {Celegans: WBGene00012030, T25G3.3, [RH, Score=417, Expect=1e-141]} {Smed: dd_Smed_v6_6223_0_1, dd_Smed_v6_6223_0_1, [RH, Score=380, Expect=3e-127]} {RNA1509_2255} {RNA1310_17844} {RNA815_6974} Mlig455_068117 {REF} {Length: 1700} {TRANSSPLICED} {Pfam: NMD3 family [PF04981.15, score=239.3]} {Human: ENSG00000169251, NMD3, NMD3 ribosome export adaptor, [RH, Score=456, Expect=9e-157]} {Mouse: ENSMUSG00000027787, Nmd3, NMD3 ribosome export adaptor, [RH, Score=452, Expect=4e-155]} {Dmel: FBgn0023542, Nmd3, Nonsense-mediated mRNA 3, [RH, Score=429, Expect=3e-146]} {Celegans: WBGene00012030, T25G3.3, [RH, Score=417, Expect=1e-141]} {Smed: dd_Smed_v6_6223_0_1, dd_Smed_v6_6223_0_1, [RH, Score=380, Expect=3e-127]} {RNA1509_2255} {RNA1310_17844, RNA1509_2255} {RNA1509_2255, RNA815_6974} |
Cumulative graph for MligTC455_46985
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.755 | 6.156 | 0.25293 | 0.90049 | |
| RegionR2 | 0.164 | 6.156 | 0.69012 | 1.00000 | |
| RegionR3 | 0.007 | 6.156 | 0.98491 | 1.00000 | |
| RegionR4 | -0.211 | 6.156 | 0.58790 | 0.90318 | |
| RegionR5 | 1.012 | 6.156 | 0.00088 | 0.00920 | |
| RegionR6 | 0.216 | 6.156 | 0.52029 | 1.00000 | |
| RegionR7 | 0.502 | 6.156 | 0.15103 | 0.72105 | |
| RegionR8 | -0.936 | 6.156 | 0.05086 | 0.44145 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.025 | 6.156 | 0.97880 | 1.00000 | |
| RegenerationR2 | 0.285 | 6.156 | 0.49367 | 0.86869 | |
| RegenerationR3 | 0.24 | 6.156 | 0.57270 | 0.89510 | |
| RegenerationR4 | 0.28 | 6.156 | 0.52395 | 0.88123 | |
| RegenerationR5 | -0.501 | 6.156 | 0.22270 | 0.65731 | |
| RegenerationR6 | 0.332 | 6.156 | 0.43535 | 0.76104 | |
| RegenerationBL | 0.35 | 6.156 | 0.39228 | 0.76062 | |
| RegenerationTP | 0.013 | 6.156 | 0.97842 | 1.00000 |
Genes with expression patterns similar to MligTC455_46985
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46985 | 3046 | 63.47 | Mlig455_023482, Mlig455_068117 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.481 Region-enriched R5: 1.012/0.00920 |
NMD3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_023482 {REF} {Length: 1700} {TRANSSPLICED} {Pfam: NMD3 family [PF04981.15, score=239.3]} {Human: ENSG00000169251, NMD3, NMD3 ribosome export adaptor, [RH, Score=456, Expect=9e-157]} {Mouse: ENSMUSG00000027787, Nmd3, NMD3 ribosome export adaptor, [RH, Score=452, Expect=4e-155]} {Dmel: FBgn0023542, Nmd3, Nonsense-mediated mRNA 3, [RH, Score=429, Expect=3e-146]} {Celegans: WBGene00012030, T25G3.3, [RH, Score=417, Expect=1e-141]} {Smed: dd_Smed_v6_6223_0_1, dd_Smed_v6_6223_0_1, [RH, Score=380, Expect=3e-127]} {RNA1509_2255} {RNA1310_17844} {RNA815_6974} Mlig455_068117 {REF} {Length: 1700} {TRANSSPLICED} {Pfam: NMD3 family [PF04981.15, score=239.3]} {Human: ENSG00000169251, NMD3, NMD3 ribosome export adaptor, [RH, Score=456, Expect=9e-157]} {Mouse: ENSMUSG00000027787, Nmd3, NMD3 ribosome export adaptor, [RH, Score=452, Expect=4e-155]} {Dmel: FBgn0023542, Nmd3, Nonsense-mediated mRNA 3, [RH, Score=429, Expect=3e-146]} {Celegans: WBGene00012030, T25G3.3, [RH, Score=417, Expect=1e-141]} {Smed: dd_Smed_v6_6223_0_1, dd_Smed_v6_6223_0_1, [RH, Score=380, Expect=3e-127]} {RNA1509_2255} {RNA1310_17844, RNA1509_2255} {RNA1509_2255, RNA815_6974} |
| 2. | MligTC455_47587 | 729 | 15.2 | Mlig455_011150, Mlig455_050861 | Neo: Int S/G2/M Age: Down-Up-Up |
ZCCHC4 | 2.496 | 0.757 | - | - | 0.787 | - | 0.952 | Mlig455_011150 {REF} {Length: 1311} {TRANSSPLICED} {RNA1509_54245} {RNA1310_22852} {RNA815_47398} Mlig455_050861 {REF} {Length: 1298} {TRANSSPLICED} {Pfam: Probable N6-adenine methyltransferase [PF10237.11, score=51.7]} {Human: ENSG00000168228, ZCCHC4, zinc finger CCHC-type containing 4, [RH, Score=145, Expect=4e-38]} {Mouse: ENSMUSG00000029179, Zcchc4, zinc finger, CCHC domain containing 4, [RH, Score=144, Expect=3e-38]} {Dmel: FBgn0033948, CG12863, [RH, Score=115, Expect=2e-28]} {Celegans: WBGene00009352, F33A8.4, [RH, Score=129, Expect=3e-33]} {Smed: dd_Smed_v6_11308_0_1, dd_Smed_v6_11308_0_1, [RH, Score=167, Expect=4e-48]} {RNA1509_54245} {RNA1310_22852, RNA1509_54245} {RNA1509_54245, RNA815_47398} |
| 3. | MligTC455_46031 | 683 | 14.22 | Mlig455_031652 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.052/0.01427 |
TIPRL | 2.456 | - | - | 0.726 | 0.774 | - | 0.956 | Mlig455_031652 {REF} {Length: 1115} {TRANSSPLICED} {Pfam: TIP41-like family [PF04176.15, score=173.2]} {Human: ENSG00000143155, TIPRL, TOR signaling pathway regulator, [RH, Score=177, Expect=6e-54]} {Mouse: ENSMUSG00000040843, Tiprl, TIP41, TOR signalling pathway regulator-like (S. cerevisiae), [RH, Score=179, Expect=7e-55]} {Dmel: FBgn0031094, CG9578, [RH, Score=146, Expect=2e-42]} {Celegans: WBGene00022803, ZK688.9, TIP41-like protein, [RH, Score=134, Expect=7e-38]} {Smed: dd_Smed_v6_8251_0_1, dd_Smed_v6_8251_0_1, [RH, Score=143, Expect=2e-41]} {RNA1509_54198} {RNA1310_33083} {RNA815_14908} |
| 4. | MligTC455_46409 | 444 | 9.25 | Mlig455_050939 | Neo: Irradiation Age: - |
PIAS3 | 1.745 | - | - | - | 0.784 | 0.961 | - | Mlig455_050939 {REF} {Length: 3165} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=75.5]; PINIT domain [PF14324.8, score=60.9]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=27.3]} {Human: ENSG00000131788, PIAS3, protein inhibitor of activated STAT 3, [Score=179, Expect=4e-47]; ENSG00000078043, PIAS2, protein inhibitor of activated STAT 2, [Score=175, Expect=7e-46]} {Mouse: ENSMUSG00000028101, Pias3, protein inhibitor of activated STAT 3, [Score=177, Expect=1e-46]; ENSMUSG00000025423, Pias2, protein inhibitor of activated STAT 2, [Score=174, Expect=8e-46]; ENSMUSG00000032405, Pias1, protein inhibitor of activated STAT 1, [Score=170, Expect=4e-44]} {Dmel: FBgn0003612, Su(var)2-10, Suppressor of variegation 2-10, [Score=201, Expect=1e-54]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=135, Expect=1e-32]} {Smed: dd_Smed_v6_7152_0_2, dd_Smed_v6_7152_0_2, [RH, Score=130, Expect=5e-31]} {RNA1509_14084} {RNA1310_11729.1, RNA1509_14084} {RNA1509_14084, RNA815_11469.1} |
| 5. | MligTC455_44010 | 11925 | 248.44 | Mlig455_045809, Mlig455_063173 | Neo: Int S/G2/M |
PES1 | 1.743 | - | - | - | 0.954 | 0.789 | - | Mlig455_045809 {REF} {Length: 1868} {TRANSSPLICED} {Pfam: Pescadillo N-terminus [PF06732.13, score=351.5]} {Human: ENSG00000100029, PES1, pescadillo ribosomal biogenesis factor 1, [Score=353, Expect=1e-116]} {Mouse: ENSMUSG00000020430, Pes1, pescadillo ribosomal biogenesis factor 1, [Score=348, Expect=9e-115]} {Dmel: FBgn0032138, CG4364, [Score=332, Expect=6e-108]} {Celegans: WBGene00003063, lpd-7, Pescadillo homolog, [Score=310, Expect=1e-100]} {Smed: dd_Smed_v6_900_0_1, dd_Smed_v6_900_0_1, [Score=246, Expect=4e-76]} {RNA1509_1246} {RNA1310_14503} {RNA815_5777} Mlig455_063173 {REF} {Length: 1867} {TRANSSPLICED} {Pfam: Pescadillo N-terminus [PF06732.13, score=350.1]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=43.9]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.0]} {Human: ENSG00000100029, PES1, pescadillo ribosomal biogenesis factor 1, [RH, Score=450, Expect=3e-152]} {Mouse: ENSMUSG00000020430, Pes1, pescadillo ribosomal biogenesis factor 1, [RH, Score=448, Expect=1e-151]} {Dmel: FBgn0032138, CG4364, [RH, Score=407, Expect=2e-135]} {Celegans: WBGene00003063, lpd-7, Pescadillo homolog, [RH, Score=377, Expect=4e-125]} {Smed: dd_Smed_v6_900_0_1, dd_Smed_v6_900_0_1, [RH, Score=315, Expect=1e-100]} {RNA1509_10018, RNA1509_10346, RNA1509_1246} {RNA1310_14503, RNA1509_10018, RNA1509_10346, RNA1509_1246} {RNA1509_10018, RNA1509_10346, RNA1509_1246, RNA815_5777} |
| 6. | MligTC455_23121 | 4355 | 90.73 | Mlig455_004752 | Neo: Int S/G2/M Age: - |
RPL24 | 0.974 | - | - | - | 0.974 | - | - | Mlig455_004752 {REF} {Length: 661} {TRANSSPLICED} {Pfam: Ribosomal protein L24e [PF01246.22, score=100.3]} {Human: ENSG00000114391, RPL24, ribosomal protein L24, [RH, Score=174, Expect=3e-56]} {Mouse: ENSMUSG00000098274, Rpl24, ribosomal protein L24, [RH, Score=174, Expect=2e-56]} {Dmel: FBgn0032518, RpL24, Ribosomal protein L24, [RH, Score=172, Expect=1e-55]} {Celegans: WBGene00004436, rpl-24.1, 60S ribosomal protein L24, [RH, Score=128, Expect=2e-38]} {Smed: dd_Smed_v6_172_0_1, dd_Smed_v6_172_0_1, [RH, Score=145, Expect=3e-45]} {RNA1509_21369} {RNA1310_52946.1} {RNA815_28188} |
| 7. | MligTC455_12779 | 145 | 3.03 | Mlig455_058383 | Neo: - Age: Up-Down-Up |
GPR89B | 0.957 | - | - | - | - | 0.957 | - | Mlig455_058383 {REF} {Length: 2299} {Pfam: Abscisic acid G-protein coupled receptor [PF12430.10, score=133.6]; The Golgi pH Regulator (GPHR) Family N-terminal [PF12537.10, score=82.0]} {Human: ENSG00000188092, GPR89B, G protein-coupled receptor 89B, [RH, Score=497, Expect=5e-174]; ENSG00000117262, GPR89A, G protein-coupled receptor 89A, [RH, Score=497, Expect=5e-174]} {Mouse: ENSMUSG00000028096, Gpr89, G protein-coupled receptor 89, [RH, Score=497, Expect=4e-174]} {Dmel: FBgn0033995, GPHR, Golgi pH Regulator, [RH, Score=439, Expect=2e-151]} {Celegans: WBGene00013551, Y75B8A.16, [RH, Score=457, Expect=6e-159]} {Smed: dd_Smed_v6_12507_0_1, dd_Smed_v6_12507_0_1, [RH, Score=537, Expect=0.0]} {RNA1509_38264} {RNA1310_11473.1} {RNA815_22038} |
| 8. | MligTC455_50957 | 2052 | 42.74 | Mlig455_023401 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.265 Region-enriched R4: 1.351/0.00012 |
TBCB | 0.952 | - | - | - | 0.952 | - | - | Mlig455_023401 {REF} {Length: 1395} {Pfam: Ubiquitin-like domain [PF14560.8, score=97.4]; CAP-Gly domain [PF01302.27, score=85.2]} {Human: ENSG00000105254, TBCB, tubulin folding cofactor B, [RH, Score=216, Expect=8e-70]} {Mouse: ENSMUSG00000006095, Tbcb, tubulin folding cofactor B, [RH, Score=215, Expect=7e-70]} {Dmel: FBgn0034451, TBCB, tubulin-binding cofactor B, [RH, Score=168, Expect=1e-51]} {Celegans: WBGene00009987, tbcb-1, Tubulin-specific chaperone B, [RH, Score=201, Expect=8e-65]} {Smed: dd_Smed_v6_3380_0_1, dd_Smed_v6_3380_0_1, [RH, Score=248, Expect=5e-83]} {RNA1509_19197, RNA1509_26255, RNA1509_27827, RNA1509_39126, RNA1509_5864} {RNA1310_29931.1, RNA1509_19197, RNA1509_26255, RNA1509_27827, RNA1509_39126, RNA1509_5864} {RNA1509_19197, RNA1509_26255, RNA1509_27827, RNA1509_39126, RNA1509_5864, RNA815_12848.2} |