TomoSeq data search

Data search

Results for MligTC455_47029

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47029

4610

96.04

Mlig455_056060, Mlig455_061578, Mlig455_061590

Age: Down-Up-Down

LIN9

Mlig455_056060 {REF} {Length: 3518} {TRANSSPLICED} {Pfam: DIRP [PF06584.15, score=122.0]; LIN9 C-terminal [PF19438.1, score=121.2]} {Human: ENSG00000183814, LIN9, lin-9 DREAM MuvB core complex component, [RH, Score=308, Expect=2e-96]} {Mouse: ENSMUSG00000058729, Lin9, lin-9 homolog (C. elegans), [RH, Score=305, Expect=2e-94]} {Dmel: FBgn0023509, mip130, Myb-interacting protein 130, [RH, Score=170, Expect=1e-43]} {Celegans: WBGene00002998, lin-9, [RH, Score=173, Expect=8e-46]} {Smed: dd_Smed_v6_4758_0_1, dd_Smed_v6_4758_0_1, [RH, Score=397, Expect=6e-130]} {RNA1509_4468} {RNA1310_3583} {RNA815_5251}

Mlig455_061578 {REF} {Length: 3520} {TRANSSPLICED} {Pfam: DIRP [PF06584.15, score=122.0]; LIN9 C-terminal [PF19438.1, score=120.0]} {Human: ENSG00000183814, LIN9, lin-9 DREAM MuvB core complex component, [RH, Score=307, Expect=8e-96]} {Mouse: ENSMUSG00000058729, Lin9, lin-9 homolog (C. elegans), [RH, Score=303, Expect=3e-94]} {Dmel: FBgn0023509, mip130, Myb-interacting protein 130, [RH, Score=170, Expect=1e-43]} {Celegans: WBGene00002998, lin-9, [RH, Score=174, Expect=6e-46]} {Smed: dd_Smed_v6_4758_0_1, dd_Smed_v6_4758_0_1, [RH, Score=395, Expect=2e-129]} {RNA1509_4468} {RNA1310_3583} {RNA815_5251}

Mlig455_061590 {REF} {Length: 3493} {TRANSSPLICED} {Pfam: DIRP [PF06584.15, score=122.0]; LIN9 C-terminal [PF19438.1, score=90.1]} {Human: ENSG00000183814, LIN9, lin-9 DREAM MuvB core complex component, [RH, Score=293, Expect=1e-90]} {Mouse: ENSMUSG00000058729, Lin9, lin-9 homolog (C. elegans), [Score=288, Expect=6e-89]} {Dmel: FBgn0023509, mip130, Myb-interacting protein 130, [RH, Score=168, Expect=3e-43]} {Celegans: WBGene00002998, lin-9, [RH, Score=166, Expect=3e-43]} {Smed: dd_Smed_v6_4758_0_1, dd_Smed_v6_4758_0_1, [Score=373, Expect=7e-121]} {RNA1509_33773} {RNA1310_3583} {RNA815_5251}

Cumulative graph for MligTC455_47029

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.519	6.66	0.01602	0.35620
RegionR2	0.081	6.66	0.80411	1.00000
RegionR3	0.11	6.66	0.68582	1.00000
RegionR4	0.391	6.66	0.21007	0.49442
RegionR5	0.212	6.66	0.41259	0.77195
RegionR6	0.379	6.66	0.15712	0.70617
RegionR7	0.506	6.66	0.08179	0.55016
RegionR8	-0.159	6.66	0.66221	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.001	6.66	0.99908	1.00000
RegenerationR2	0.117	6.66	0.71206	0.96061
RegenerationR3	0.38	6.66	0.25358	0.68802
RegenerationR4	0.248	6.66	0.46327	0.84904
RegenerationR5	0.539	6.66	0.09846	0.47922
RegenerationR6	0.924	6.66	0.00426	0.07851
RegenerationBL	0.694	6.66	0.01942	0.15042
RegenerationTP	0.413	6.66	0.21746	0.66068

Genes with expression patterns similar to MligTC455_47029

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47029	4610	96.04	Mlig455_056060, Mlig455_061578, Mlig455_061590	Neo: Neoblast Age: Down-Up-Down	LIN9	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_056060 {REF} {Length: 3518} {TRANSSPLICED} {Pfam: DIRP [PF06584.15, score=122.0]; LIN9 C-terminal [PF19438.1, score=121.2]} {Human: ENSG00000183814, LIN9, lin-9 DREAM MuvB core complex component, [RH, Score=308, Expect=2e-96]} {Mouse: ENSMUSG00000058729, Lin9, lin-9 homolog (C. elegans), [RH, Score=305, Expect=2e-94]} {Dmel: FBgn0023509, mip130, Myb-interacting protein 130, [RH, Score=170, Expect=1e-43]} {Celegans: WBGene00002998, lin-9, [RH, Score=173, Expect=8e-46]} {Smed: dd_Smed_v6_4758_0_1, dd_Smed_v6_4758_0_1, [RH, Score=397, Expect=6e-130]} {RNA1509_4468} {RNA1310_3583} {RNA815_5251} Mlig455_061578 {REF} {Length: 3520} {TRANSSPLICED} {Pfam: DIRP [PF06584.15, score=122.0]; LIN9 C-terminal [PF19438.1, score=120.0]} {Human: ENSG00000183814, LIN9, lin-9 DREAM MuvB core complex component, [RH, Score=307, Expect=8e-96]} {Mouse: ENSMUSG00000058729, Lin9, lin-9 homolog (C. elegans), [RH, Score=303, Expect=3e-94]} {Dmel: FBgn0023509, mip130, Myb-interacting protein 130, [RH, Score=170, Expect=1e-43]} {Celegans: WBGene00002998, lin-9, [RH, Score=174, Expect=6e-46]} {Smed: dd_Smed_v6_4758_0_1, dd_Smed_v6_4758_0_1, [RH, Score=395, Expect=2e-129]} {RNA1509_4468} {RNA1310_3583} {RNA815_5251} Mlig455_061590 {REF} {Length: 3493} {TRANSSPLICED} {Pfam: DIRP [PF06584.15, score=122.0]; LIN9 C-terminal [PF19438.1, score=90.1]} {Human: ENSG00000183814, LIN9, lin-9 DREAM MuvB core complex component, [RH, Score=293, Expect=1e-90]} {Mouse: ENSMUSG00000058729, Lin9, lin-9 homolog (C. elegans), [Score=288, Expect=6e-89]} {Dmel: FBgn0023509, mip130, Myb-interacting protein 130, [RH, Score=168, Expect=3e-43]} {Celegans: WBGene00002998, lin-9, [RH, Score=166, Expect=3e-43]} {Smed: dd_Smed_v6_4758_0_1, dd_Smed_v6_4758_0_1, [Score=373, Expect=7e-121]} {RNA1509_33773} {RNA1310_3583} {RNA815_5251}
2.	MligTC455_52680	4317	89.93	Mlig455_029256, Mlig455_035643, Mlig455_035743	Neo: Neoblast, stringent Age: - Region-enriched R4: 1.825/0.00000 Region-enriched R5: 1.260/0.00000	UBE2I	0.956	-	-	-	0.956	-	-	Mlig455_029256 {REF} {Length: 1140} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=148.9]} {Human: ENSG00000103275, UBE2I, ubiquitin conjugating enzyme E2 I, [RH, Score=260, Expect=1e-89]} {Mouse: ENSMUSG00000015120, Ube2i, ubiquitin-conjugating enzyme E2I, [RH, Score=260, Expect=9e-90]} {Dmel: FBgn0010602, lwr, lesswright, [RH, Score=264, Expect=3e-91]} {Celegans: WBGene00006706, ubc-9, SUMO-conjugating enzyme UBC9, [RH, Score=243, Expect=3e-83]} {Smed: dd_Smed_v6_1535_0_1, dd_Smed_v6_1535_0_1, [RH, Score=273, Expect=7e-95]} {RNA1509_43186, RNA1509_48884} {RNA1310_35992, RNA1509_43186, RNA1509_48884} {RNA1509_43186, RNA1509_48884, RNA815_16818} Mlig455_035643 {REF} {Length: 1287} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=148.9]} {Human: ENSG00000103275, UBE2I, ubiquitin conjugating enzyme E2 I, [RH, Score=260, Expect=1e-89]} {Mouse: ENSMUSG00000015120, Ube2i, ubiquitin-conjugating enzyme E2I, [RH, Score=260, Expect=9e-90]} {Dmel: FBgn0010602, lwr, lesswright, [RH, Score=264, Expect=3e-91]} {Celegans: WBGene00006706, ubc-9, SUMO-conjugating enzyme UBC9, [RH, Score=243, Expect=3e-83]} {Smed: dd_Smed_v6_1535_0_1, dd_Smed_v6_1535_0_1, [RH, Score=273, Expect=7e-95]} {RNA1509_43186} {RNA1310_35992} {RNA815_16818} Mlig455_035743 {REF} {Length: 974} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=149.0]} {Human: ENSG00000103275, UBE2I, ubiquitin conjugating enzyme E2 I, [RH, Score=261, Expect=5e-90]} {Mouse: ENSMUSG00000015120, Ube2i, ubiquitin-conjugating enzyme E2I, [RH, Score=261, Expect=3e-90]} {Dmel: FBgn0010602, lwr, lesswright, [RH, Score=264, Expect=1e-91]} {Celegans: WBGene00006706, ubc-9, SUMO-conjugating enzyme UBC9, [RH, Score=244, Expect=1e-83]} {Smed: dd_Smed_v6_1535_0_1, dd_Smed_v6_1535_0_1, [RH, Score=273, Expect=2e-95]} {RNA1509_40568, RNA1509_5191} {RNA1310_35992, RNA1509_40568, RNA1509_5191} {RNA1509_40568, RNA1509_5191, RNA815_16818}
3.	MligTC455_50908	139	2.9	Mlig455_052218	Neo: - Age: logFC(26M/2M)=-0.399		0.954	-	0.954	-	-	-	-	Mlig455_052218 {REF} {Length: 3196} {TRANSSPLICED} {RNA1509_28633, RNA1509_55949} {RNA1310_25562, RNA1509_28633, RNA1509_55949} {RNA1509_28633, RNA1509_55949, RNA815_13856}
4.	MligTC455_24350	601	12.52	Mlig455_039380	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_039380 {REF} {Length: 2364} {Pfam: Delta serrate ligand [PF01414.21, score=23.4]} {RNA1509_47006} {RNA1310_11541} {RNA815_3746.1}
5.	MligTC455_54251	119	2.49	Mlig455_009992	Neo: - Age: -	BBS2	0.952	-	0.952	-	-	-	-	Mlig455_009992 {REF} {Length: 3121} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, C-terminal [PF14782.8, score=486.4]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=145.4]; Ciliary BBSome complex subunit 2, N-terminal [PF14781.8, score=84.0]} {Human: ENSG00000125124, BBS2, Bardet-Biedl syndrome 2, [RH, Score=679, Expect=0.0]} {Mouse: ENSMUSG00000031755, Bbs2, Bardet-Biedl syndrome 2 (human), [RH, Score=677, Expect=0.0]} {Celegans: WBGene00000242, bbs-2, Bardet-Biedl syndrome 2 protein homolog, [RH, Score=323, Expect=2e-99]} {Smed: dd_Smed_v6_10186_0_4, dd_Smed_v6_10186_0_4, [RH, Score=570, Expect=0.0]} {RNA1509_16473} {RNA1310_8004, RNA1509_16473} {RNA1509_16473, RNA815_4076}
6.	MligTC455_03563	760	15.83	Mlig455_025786	Neo: Int S/G2/M Age: -	POLR2B	0.95	-	-	-	-	0.950	-	Mlig455_025786 {REF} {Length: 1377} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1} {RNA815_603}
7.	MligTC455_17625	132	2.75	Mlig455_003034	Neo: - Age: -	POLR3D	0.95	-	0.950	-	-	-	-	Mlig455_003034 {REF} {Length: 2963} {TRANSSPLICED} {Pfam: RNA polymerase III RPC4 [PF05132.16, score=38.2]} {Human: ENSG00000168495, POLR3D, RNA polymerase III subunit D, [Score=57.0, Expect=3e-08]} {Mouse: ENSMUSG00000000776, Polr3d, polymerase (RNA) III (DNA directed) polypeptide D, [RH, Score=58.5, Expect=6e-09]} {Dmel: FBgn0036775, CG5147, [Score=48.9, Expect=6e-06]} {RNA1509_20639} {RNA1310_15920} {RNA815_16517}
8.	MligTC455_38465	1690	35.2	Mlig455_015142	Neo: Int S/G2/M Age: -	IWS1	0.95	-	0.950	-	-	-	-	Mlig455_015142 {REF} {Length: 3778} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=39.0]; Cornifin (SPRR) family [PF02389.17, score=25.6]} {Human: ENSG00000163166, IWS1, IWS1, SUPT6H interacting protein, [RH, Score=280, Expect=7e-82]} {Mouse: ENSMUSG00000024384, Iws1, IWS1, SUPT6 interacting protein, [RH, Score=277, Expect=1e-81]} {Dmel: FBgn0030738, CG9915, [RH, Score=225, Expect=2e-62]} {Celegans: WBGene00008729, F13B12.1, IWS1-like protein, [RH, Score=193, Expect=2e-53]} {Smed: dd_Smed_v6_995_0_1, dd_Smed_v6_995_0_1, [RH, Score=201, Expect=2e-56]} {RNA1509_12526, RNA1509_17975} {RNA1310_3895.1, RNA1509_12526, RNA1509_17975} {RNA1509_12526, RNA1509_17975, RNA815_2445.1}

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