Data search
Results for MligTC455_47032
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47032 | 2598 | 54.12 | Mlig455_061980 | Neo: - |
LIN9 | Mlig455_061980 {REF} {Length: 3247} {TRANSSPLICED} {Pfam: DIRP [PF06584.15, score=122.0]; LIN9 C-terminal [PF19438.1, score=43.9]} {Human: ENSG00000183814, LIN9, lin-9 DREAM MuvB core complex component, [Score=268, Expect=6e-81]} {Mouse: ENSMUSG00000058729, Lin9, lin-9 homolog (C. elegans), [Score=265, Expect=1e-79]} {Dmel: FBgn0023509, mip130, Myb-interacting protein 130, [RH, Score=169, Expect=1e-43]} {Celegans: WBGene00002998, lin-9, [Score=149, Expect=1e-37]} {Smed: dd_Smed_v6_4758_0_1, dd_Smed_v6_4758_0_1, [Score=339, Expect=7e-108]} {RNA1509_33773} {RNA1310_3583} {RNA815_11212.1} |
Cumulative graph for MligTC455_47032
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.638 | 5.92 | 0.00320 | 0.18276 | |
| RegionR2 | 0.166 | 5.92 | 0.75980 | 1.00000 | |
| RegionR3 | 0.602 | 5.92 | 0.17239 | 0.69842 | |
| RegionR4 | -0.155 | 5.92 | 0.75689 | 1.00000 | |
| RegionR5 | 0.554 | 5.92 | 0.18745 | 0.46926 | |
| RegionR6 | 0.712 | 5.92 | 0.09953 | 0.57918 | |
| RegionR7 | 0.501 | 5.92 | 0.24990 | 0.87612 | |
| RegionR8 | 0.259 | 5.92 | 0.59404 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.98 | 5.92 | 0.49468 | 1.00000 | |
| RegenerationR2 | 0.223 | 5.92 | 0.67389 | 0.94657 | |
| RegenerationR3 | 0.456 | 5.92 | 0.40753 | 0.80708 | |
| RegenerationR4 | 0.681 | 5.92 | 0.23829 | 0.68724 | |
| RegenerationR5 | 0.144 | 5.92 | 0.79440 | 0.98722 | |
| RegenerationR6 | 0.273 | 5.92 | 0.62592 | 0.88432 | |
| RegenerationBL | 0.063 | 5.92 | 0.89877 | 1.00000 | |
| RegenerationTP | -0.098 | 5.92 | 0.85487 | 1.00000 |
Genes with expression patterns similar to MligTC455_47032
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47032 | 2598 | 54.12 | Mlig455_061980 | Neo: - |
LIN9 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_061980 {REF} {Length: 3247} {TRANSSPLICED} {Pfam: DIRP [PF06584.15, score=122.0]; LIN9 C-terminal [PF19438.1, score=43.9]} {Human: ENSG00000183814, LIN9, lin-9 DREAM MuvB core complex component, [Score=268, Expect=6e-81]} {Mouse: ENSMUSG00000058729, Lin9, lin-9 homolog (C. elegans), [Score=265, Expect=1e-79]} {Dmel: FBgn0023509, mip130, Myb-interacting protein 130, [RH, Score=169, Expect=1e-43]} {Celegans: WBGene00002998, lin-9, [Score=149, Expect=1e-37]} {Smed: dd_Smed_v6_4758_0_1, dd_Smed_v6_4758_0_1, [Score=339, Expect=7e-108]} {RNA1509_33773} {RNA1310_3583} {RNA815_11212.1} |
| 2. | MligTC455_47030 | 3642 | 75.87 | Mlig455_056061 | Neo: - Age: - |
2.446 | - | - | 0.700 | 0.787 | 0.959 | - | Mlig455_056061 {REF} {Length: 1265} {TRANSSPLICED} {RNA1509_10289, RNA1509_4431} {RNA1310_25201.1, RNA1509_10289, RNA1509_4431} {RNA1509_10289, RNA1509_4431, RNA815_11212.1} | |
| 3. | MligTC455_21834 | 1666 | 34.7 | Mlig455_030797 | Neo: - |
IPO5 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_030797 {REF} {Length: 5500} {Pfam: Importin repeat 6 [PF18829.3, score=96.0]; Importin repeat [PF18808.3, score=85.5]; HEAT repeat [PF02985.24, score=52.3]; HEAT repeats [PF13646.8, score=52.3]; HEAT-like repeat [PF13513.8, score=49.5]; Vacuolar 14 Fab1-binding region [PF12755.9, score=46.7]; Importin repeat [PF18816.3, score=27.1]; Dos2-interacting transcription regulator of RNA-Pol-II [PF14500.8, score=24.5]} {Human: ENSG00000065150, IPO5, importin 5, [Score=992, Expect=0.0]} {Mouse: ENSMUSG00000030662, Ipo5, importin 5, [Score=992, Expect=0.0]} {Dmel: FBgn0087013, Karybeta3, Karyopherin beta 3, [Score=992, Expect=0.0]} {Celegans: WBGene00002077, imb-3, IMportin Beta family, [Score=553, Expect=0.0]} {Smed: dd_Smed_v6_665_0_1, dd_Smed_v6_665_0_1, [Score=751, Expect=0.0]} {RNA1509_879} {RNA1310_2919.1} {RNA815_887} |
| 4. | MligTC455_44350 | 945 | 19.69 | Mlig455_063524 | Neo: - Age: - |
RRAS2 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_063524 {REF} {Length: 3161} {Pfam: Ras family [PF00071.24, score=162.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=67.9]; ADP-ribosylation factor family [PF00025.23, score=40.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=26.9]; 50S ribosome-binding GTPase [PF01926.25, score=19.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=19.0]} {Human: ENSG00000133818, RRAS2, RAS related 2, [RH, Score=179, Expect=7e-57]; ENSG00000126458, RRAS, RAS related, [RH, Score=173, Expect=3e-54]} {Mouse: ENSMUSG00000055723, Rras2, related RAS viral (r-ras) oncogene 2, [RH, Score=179, Expect=5e-57]; ENSMUSG00000038387, Rras, related RAS viral (r-ras) oncogene, [RH, Score=172, Expect=5e-54]} {Dmel: FBgn0003206, Ras64B, Ras oncogene at 64B, [RH, Score=166, Expect=5e-52]} {Celegans: WBGene00004310, ras-1, GTP binding protein; R-RAS related; R-ras1 homolog, [RH, Score=181, Expect=1e-57]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [Score=168, Expect=3e-53]} {RNA1509_26364, RNA1509_27424, RNA1509_8658} {RNA1310_4951.1, RNA1509_26364, RNA1509_27424, RNA1509_8658} {RNA1509_26364, RNA1509_27424, RNA1509_8658, RNA815_12694.1} |
| 5. | MligTC455_24434 | 877 | 18.27 | Mlig455_015179 | Neo: Irradiation Age: logFC(26M/2M)=0.392 Region-enriched R5: 1.596/0.00000 |
ATIC | 0.961 | - | - | - | - | 0.961 | - | Mlig455_015179 {REF} {Length: 1656} {Pfam: AICARFT/IMPCHase bienzyme [PF01808.20, score=40.9]} {Human: ENSG00000138363, ATIC, 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase, [Score=62.4, Expect=4e-13]} {Mouse: ENSMUSG00000026192, Atic, 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase, [Score=62.0, Expect=7e-13]} {Dmel: FBgn0039241, CG11089, [Score=60.8, Expect=1e-12]} {Celegans: WBGene00016957, atic-1, 5-Aminoimidazole-4-carboxamide ribonucleotide formylTransferase/IMP Cyclohydrolase homolog, [Score=51.2, Expect=2e-09]} {Smed: dd_Smed_v6_3445_0_1, dd_Smed_v6_3445_0_1, [Score=60.5, Expect=1e-12]} {RNA1509_6261} {RNA1310_7712.1} {RNA815_2690.1} |
| 6. | MligTC455_42826 | 529 | 11.02 | Mlig455_008264 | Neo: - Age: logFC(26M/2M)=0.618 Region-enriched R4: 1.475/0.02452 |
WDR26 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_008264 {REF} {Length: 3439} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=63.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=36.6]} {Human: ENSG00000162923, WDR26, WD repeat domain 26, [RH, Score=418, Expect=3e-138]} {Mouse: ENSMUSG00000038733, Wdr26, WD repeat domain 26, [RH, Score=427, Expect=2e-142]} {Dmel: FBgn0037094, CG7611, [RH, Score=392, Expect=9e-129]} {Celegans: WBGene00010572, wdr-5.2, WD repeat-containing protein wdr-5.2, [Score=68.6, Expect=4e-12]} {Smed: dd_Smed_v6_6611_0_1, dd_Smed_v6_6611_0_1, [RH, Score=228, Expect=8e-66]} {RNA1509_20107, RNA1509_44344, RNA1509_54584} {RNA1310_14508.1, RNA1509_20107, RNA1509_44344, RNA1509_54584} {RNA1509_20107, RNA1509_44344, RNA1509_54584, RNA815_16830} |
| 7. | MligTC455_46232 | 862 | 17.96 | Mlig455_041377 | Neo: - Age: - |
DNAJB12 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_041377 {REF} {Length: 2592} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=89.8]; Domain of unknown function (DUF1977) [PF09320.13, score=81.0]} {Human: ENSG00000148719, DNAJB12, DnaJ heat shock protein family (Hsp40) member B12, [RH, Score=279, Expect=7e-91]; ENSG00000164031, DNAJB14, DnaJ heat shock protein family (Hsp40) member B14, [RH, Score=278, Expect=9e-91]} {Mouse: ENSMUSG00000020109, Dnajb12, DnaJ heat shock protein family (Hsp40) member B12, [RH, Score=286, Expect=8e-94]; ENSMUSG00000074212, Dnajb14, DnaJ heat shock protein family (Hsp40) member B14, [RH, Score=280, Expect=2e-91]} {Dmel: FBgn0038195, CG3061, [RH, Score=291, Expect=3e-96]} {Celegans: WBGene00001019, dnj-1, DnaJ homolog subfamily B member 1, [RH, Score=261, Expect=3e-84]} {Smed: dd_Smed_v6_3790_0_1, dd_Smed_v6_3790_0_1, [RH, Score=246, Expect=6e-79]} {RNA1509_30945, RNA1509_31998, RNA1509_9746} {RNA1310_22974, RNA1509_30945, RNA1509_31998, RNA1509_9746} {RNA1509_30945, RNA1509_31998, RNA1509_9746, RNA815_10289} |
| 8. | MligTC455_40738 | 1085 | 22.61 | Mlig455_031939 | Neo: - Age: Down-Up-Up Region-enriched R3: 1.165/0.03085 |
CALM2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_031939 {REF} {Length: 1015} {Pfam: EF hand [PF00036.34, score=116.1]; EF-hand domain pair [PF13499.8, score=98.9]; EF-hand domain [PF13405.8, score=96.2]; EF hand [PF13202.8, score=87.0]; EF-hand domain pair [PF13833.8, score=78.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=35.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=28.5]; EF-hand domain [PF14658.8, score=27.5]; Caleosin related protein [PF05042.15, score=22.5]; Dockerin type I domain [PF00404.20, score=20.4]; Tellurite resistance protein TerB [PF05099.15, score=19.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=140, Expect=3e-42]; ENSG00000160014, CALM3, calmodulin 3, [Score=139, Expect=4e-42]; ENSG00000198668, CALM1, calmodulin 1, [Score=139, Expect=4e-42]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=139, Expect=3e-42]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=139, Expect=3e-42]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=139, Expect=3e-42]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=133, Expect=6e-40]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=137, Expect=7e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=137, Expect=6e-42]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=137, Expect=5e-42]} {RNA1509_11242} {RNA1310_40530.1} {RNA815_5913.1} |
| 9. | MligTC455_21842 | 17243 | 359.23 | Mlig455_007586, Mlig455_036063 | Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=0.653 Region-enriched R4: 1.020/0.00071 |
RPL27A | 0.95 | - | - | - | - | 0.950 | - | Mlig455_007586 {REF} {Length: 605} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A [PF00828.21, score=65.4]} {Human: ENSG00000166441, RPL27A, ribosomal protein L27a, [RH, Score=224, Expect=4e-76]} {Mouse: ENSMUSG00000046364, Rpl27a, ribosomal protein L27A, [RH, Score=224, Expect=4e-76]} {Dmel: FBgn0285948, RpL27A, Ribosomal protein L27A, [RH, Score=208, Expect=3e-70]} {Celegans: WBGene00021350, Y37E3.8, [RH, Score=212, Expect=7e-72]} {Smed: dd_Smed_v6_155_1_1, dd_Smed_v6_155_1_1, [RH, Score=242, Expect=1e-83]} {RNA1509_6380} {RNA1310_59978} {RNA815_11321.1} Mlig455_036063 {REF} {Length: 605} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A [PF00828.21, score=65.4]} {Human: ENSG00000166441, RPL27A, ribosomal protein L27a, [RH, Score=224, Expect=4e-76]} {Mouse: ENSMUSG00000046364, Rpl27a, ribosomal protein L27A, [RH, Score=224, Expect=4e-76]} {Dmel: FBgn0285948, RpL27A, Ribosomal protein L27A, [RH, Score=208, Expect=3e-70]} {Celegans: WBGene00021350, Y37E3.8, [RH, Score=212, Expect=7e-72]} {Smed: dd_Smed_v6_155_1_1, dd_Smed_v6_155_1_1, [RH, Score=242, Expect=1e-83]} {RNA1509_6380} {RNA1310_59978, RNA1509_6380} {RNA1509_6380, RNA815_11321.1} |
Berezikov Lab - 2020-2021 © ERIBA