M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_47036

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47036 254 5.30 Mlig455_016097

Neo: -

Age: -

 ZFP28 Mlig455_016097 {REF} {Length: 2458} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=63.6]; Zinc-finger double domain [PF13465.8, score=47.8]; C2H2-type zinc finger [PF13894.8, score=38.4]; Zinc-finger of C2H2 type [PF12874.9, score=29.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=27.4]} {Human: ENSG00000196867, ZFP28, ZFP28 zinc finger protein, [Score=115, Expect=3e-28]; ENSG00000096654, ZNF184, zinc finger protein 184, [Score=112, Expect=2e-27]; ENSG00000141040, ZNF287, zinc finger protein 287, [Score=112, Expect=3e-27]; ENSG00000176293, ZNF135, zinc finger protein 135, [Score=111, Expect=4e-27]; ENSG00000197841, ZNF181, zinc finger protein 181, [Score=111, Expect=5e-27]; ENSG00000181444, ZNF467, zinc finger protein 467, [Score=111, Expect=5e-27]} {Mouse: ENSMUSG00000091183, Gm5141, predicted gene 5141, [Score=114, Expect=2e-28]; ENSMUSG00000068551, Zfp467, zinc finger protein 467, [Score=109, Expect=1e-26]} {Dmel: FBgn0000286, Cf2, Chorion factor 2, [Score=115, Expect=7e-29]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=105, Expect=3e-27]} {Smed: dd_Smed_v6_10676_0_1, dd_Smed_v6_10676_0_1, [Score=98.2, Expect=1e-23]} {RNA1509_15349, RNA1509_38269} {RNA1310_26716, RNA1509_15349} {RNA1509_15349, RNA815_19018}

Cumulative graph for MligTC455_47036

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.376 2.747 0.79544 1.00000
RegionR2 -0.569 2.747 0.39909 0.79349
RegionR3 -0.21 2.747 0.69745 1.00000
RegionR4 -0.626 2.747 0.33799 0.65745
RegionR5 0.346 2.747 0.45887 0.82103
RegionR6 0.039 2.747 0.94198 1.00000
RegionR7 0.36 2.747 0.58125 1.00000
RegionR8 0.283 2.747 0.72629 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.238 2.747 0.19552 0.93468
RegenerationR2 0.049 2.747 0.93478 1.00000
RegenerationR3 -0.408 2.747 0.52396 0.86868
RegenerationR4 -0.018 2.747 0.97761 1.00000
RegenerationR5 -0.783 2.747 0.17040 0.59838
RegenerationR6 -0.559 2.747 0.39484 0.73388
RegenerationBL -0.273 2.747 0.71779 1.00000
RegenerationTP -1.416 2.747 0.10915 0.50901


Genes with expression patterns similar to MligTC455_47036

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47036 254 5.3 Mlig455_016097

Neo: -

Age: -

 ZFP28 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_016097 {REF} {Length: 2458} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=63.6]; Zinc-finger double domain [PF13465.8, score=47.8]; C2H2-type zinc finger [PF13894.8, score=38.4]; Zinc-finger of C2H2 type [PF12874.9, score=29.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=27.4]} {Human: ENSG00000196867, ZFP28, ZFP28 zinc finger protein, [Score=115, Expect=3e-28]; ENSG00000096654, ZNF184, zinc finger protein 184, [Score=112, Expect=2e-27]; ENSG00000141040, ZNF287, zinc finger protein 287, [Score=112, Expect=3e-27]; ENSG00000176293, ZNF135, zinc finger protein 135, [Score=111, Expect=4e-27]; ENSG00000197841, ZNF181, zinc finger protein 181, [Score=111, Expect=5e-27]; ENSG00000181444, ZNF467, zinc finger protein 467, [Score=111, Expect=5e-27]} {Mouse: ENSMUSG00000091183, Gm5141, predicted gene 5141, [Score=114, Expect=2e-28]; ENSMUSG00000068551, Zfp467, zinc finger protein 467, [Score=109, Expect=1e-26]} {Dmel: FBgn0000286, Cf2, Chorion factor 2, [Score=115, Expect=7e-29]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=105, Expect=3e-27]} {Smed: dd_Smed_v6_10676_0_1, dd_Smed_v6_10676_0_1, [Score=98.2, Expect=1e-23]} {RNA1509_15349, RNA1509_38269} {RNA1310_26716, RNA1509_15349} {RNA1509_15349, RNA815_19018}
2. MligTC455_28063 833 17.35 Mlig455_056559

Neo: -

Age: -

 TFB1M 1.72 - 0.956 0.764 - - - Mlig455_056559 {REF} {Length: 1318} {TRANSSPLICED} {Pfam: Ribosomal RNA adenine dimethylase [PF00398.22, score=119.9]; Methyltransferase domain [PF13649.8, score=22.8]; Protein of unknown function (DUF1698) [PF08003.13, score=19.7]; Methyltransferase domain [PF13489.8, score=18.8]} {Human: ENSG00000029639, TFB1M, transcription factor B1, mitochondrial, [RH, Score=237, Expect=3e-75]} {Mouse: ENSMUSG00000036983, Tfb1m, transcription factor B1, mitochondrial, [RH, Score=230, Expect=1e-72]} {Dmel: FBgn0261381, mtTFB1, Mitochondrial Transcription Factor B1, [RH, Score=200, Expect=2e-61]} {Celegans: WBGene00020189, tfbm-1, Dimethyladenosine transferase 1, mitochondrial, [RH, Score=243, Expect=1e-77]} {Smed: dd_Smed_v6_8684_0_1, dd_Smed_v6_8684_0_1, [RH, Score=283, Expect=4e-93]} {RNA1509_31959, RNA1509_57587} {RNA1310_25999, RNA1509_57587} {RNA1509_57587, RNA815_11217}
3. MligTC455_27780 531 11.05 Mlig455_007117

Neo: -

Age: -

 SLC47A1 1.717 - 0.951 - 0.766 - - Mlig455_007117 {REF} {Length: 12439} {TRANSSPLICED} {Pfam: MatE [PF01554.20, score=215.9]} {Human: ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [RH, Score=337, Expect=4e-105]} {Mouse: ENSMUSG00000010122, Slc47a1, solute carrier family 47, member 1, [RH, Score=342, Expect=2e-107]} {Smed: dd_Smed_v6_7241_0_1, dd_Smed_v6_7241_0_1, [Score=400, Expect=9e-129]} {RNA1509_19493, RNA1509_24547, RNA1509_25045, RNA1509_49254} {RNA1310_14869.1, RNA1509_19493, RNA1509_24547, RNA1509_49254} {RNA1509_19493, RNA1509_24547, RNA1509_49254, RNA815_9644}
4. MligTC455_08715 237 4.94 Mlig455_004262

Neo: -

Age: -

 IPO9 1.693 - 0.957 0.736 - - - Mlig455_004262 {REF} {Length: 4849} {TRANSSPLICED} {Pfam: Importin-beta N-terminal domain [PF03810.21, score=26.9]; rRNA processing/ribosome biogenesis [PF08167.14, score=23.5]; Exportin 1-like protein [PF08389.14, score=19.2]} {Human: ENSG00000198700, IPO9, importin 9, [RH, Score=558, Expect=0.0]} {Mouse: ENSMUSG00000041879, Ipo9, importin 9, [RH, Score=565, Expect=0.0]} {Dmel: FBgn0037894, Ranbp9, [RH, Score=374, Expect=1e-112]} {RNA1509_15102} {RNA1310_3940} {RNA815_16834}
5. MligTC455_22621 584 12.17 Mlig455_012210

Neo: -

Age: -

 ATRX 0.976 - - - 0.976 - - Mlig455_012210 {REF} {Length: 7201} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=198.9]; Helicase conserved C-terminal domain [PF00271.33, score=52.6]; Type III restriction enzyme, res subunit [PF04851.17, score=38.1]; CDC45-like protein [PF02724.16, score=17.5]} {Human: ENSG00000085224, ATRX, ATRX, chromatin remodeler, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000031229, Atrx, ATRX, chromatin remodeler, [Score=704, Expect=0.0]} {Dmel: FBgn0039338, XNP, [Score=653, Expect=0.0]} {Celegans: WBGene00006961, xnp-1, Transcriptional regulator ATRX homolog, [Score=575, Expect=0.0]} {Smed: dd_Smed_v6_5478_0_1, dd_Smed_v6_5478_0_1, [RH, Score=446, Expect=4e-141]} {RNA1509_2800, RNA1509_33370, RNA1509_42134, RNA1509_54667} {RNA1310_990, RNA1509_33370, RNA1509_42134, RNA1509_54667} {RNA1509_33370, RNA1509_42134, RNA1509_54667, RNA815_839}
6. MligTC455_51419 687 14.32 Mlig455_064317, Mlig455_064348

Neo: Int S/G2/M

Age: -

 0.973 - 0.973 - - - -

Mlig455_064317 {REF} {Length: 667} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13877} {RNA1310_34338} {RNA815_37031.2}

Mlig455_064348 {REF} {Length: 668} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13877} {RNA1310_34338, RNA1509_13877} {RNA1509_13877, RNA815_37031.2}
7. MligTC455_15962 394 8.22 Mlig455_016102

Neo: Irradiation

Age: -

Region-enriched R5: 1.799/0.00090

 MIB2 0.971 - 0.971 - - - - Mlig455_016102 {REF} {Length: 4719} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=169.0]; Mib_herc2 [PF06701.15, score=160.9]; Ankyrin repeats (many copies) [PF13637.8, score=122.9]; Ankyrin repeats (many copies) [PF13857.8, score=111.6]; Ankyrin repeat [PF00023.32, score=102.2]; Ankyrin repeat [PF13606.8, score=86.2]; Mind bomb SH3 repeat domain [PF18346.3, score=81.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=60.4]; Zinc finger, ZZ type [PF00569.19, score=22.2]} {Human: ENSG00000197530, MIB2, mindbomb E3 ubiquitin protein ligase 2, [RH, Score=564, Expect=0.0]} {Mouse: ENSMUSG00000029060, Mib2, mindbomb E3 ubiquitin protein ligase 2, [RH, Score=493, Expect=8e-159]} {Dmel: FBgn0086442, mib2, mind bomb 2, [RH, Score=555, Expect=0.0]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=124, Expect=2e-28]} {Smed: dd_Smed_v6_6104_0_2, dd_Smed_v6_6104_0_2, [Score=275, Expect=1e-76]} {RNA1509_12439} {RNA1310_3959.1, RNA1509_12439} {RNA1509_12439, RNA815_13244}
8. MligTC455_20137 351 7.31 Mlig455_063548

Neo: -

Age: -

 MBTPS2 0.963 - - - 0.963 - - Mlig455_063548 {REF} {Length: 3107} {TRANSSPLICED} {Pfam: Peptidase family M50 [PF02163.24, score=49.2]} {Human: ENSG00000012174, MBTPS2, membrane bound transcription factor peptidase, site 2, [RH, Score=247, Expect=1e-75]} {Mouse: ENSMUSG00000046873, Mbtps2, membrane-bound transcription factor peptidase, site 2, [RH, Score=254, Expect=9e-79]} {Dmel: FBgn0033656, S2P, site-2 protease, [RH, Score=153, Expect=5e-41]} {Celegans: WBGene00013225, Y56A3A.2, [RH, Score=171, Expect=7e-47]} {Smed: dd_Smed_v6_12727_0_1, dd_Smed_v6_12727_0_1, [RH, Score=268, Expect=1e-84]} {RNA1509_36146} {RNA1310_25751.2} {RNA815_18115}
9. MligTC455_47778 152 3.17 Mlig455_068525

Neo: -

Age: -

 0.962 - - - 0.962 - - Mlig455_068525 {REF} {Length: 3895} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=24.1]} {Smed: dd_Smed_v6_3827_0_1, dd_Smed_v6_3827_0_1, [RH, Score=79.7, Expect=1e-15]} {RNA1509_45904, RNA1509_9507} {RNA1310_5230, RNA1509_45904, RNA1509_9507} {RNA1509_45904, RNA1509_9507, RNA815_14628}
10. MligTC455_40222 35 0.74 Mlig455_030505

Neo: -

Age: -

 RABL6 0.96 - - - 0.960 - - Mlig455_030505 {REF} {Length: 1394} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=50.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=27.6]} {Human: ENSG00000196642, RABL6, RAB, member RAS oncogene family like 6, [Score=189, Expect=6e-55]} {Mouse: ENSMUSG00000015087, Rabl6, RAB, member RAS oncogene family-like 6, [Score=170, Expect=1e-46]} {Dmel: FBgn0015790, Rab11, [Score=57.0, Expect=3e-09]} {Celegans: WBGene00008585, F08G12.1, [Score=162, Expect=2e-44]} {Smed: dd_Smed_v6_6925_0_3, dd_Smed_v6_6925_0_3, [Score=205, Expect=3e-63]} {RNA1509_14391} {RNA1310_3744.1} {RNA815_23301}
11. MligTC455_50162 73 1.53 Mlig455_042074

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.488

 TLR2 0.959 - - - 0.959 - - Mlig455_042074 {REF} {Length: 2789} {Pfam: Leucine rich repeat [PF13855.8, score=68.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=27.4]} {Human: ENSG00000137462, TLR2, toll like receptor 2, [Score=52.0, Expect=5e-07]} {Dmel: FBgn0028888, CG4168, [Score=48.5, Expect=9e-06]} {RNA1310_9861.1} {RNA815_5552}
12. MligTC455_52438 102 2.13 Mlig455_053571

Neo: -

Age: -

 0.958 - - - 0.958 - - Mlig455_053571 {REF} {Length: 2421} {TRANSSPLICED} {RNA1509_22620} {RNA1310_9393.3} {RNA815_16638}
13. MligTC455_17060 450 9.38 Mlig455_064855

Neo: -

Age: -

Region-enriched R5: 1.550/0.00019

 PMPCA 0.953 - 0.953 - - - - Mlig455_064855 {REF} {Length: 1741} {TRANSSPLICED} {Pfam: Peptidase M16 inactive domain [PF05193.23, score=107.8]; Insulinase (Peptidase family M16) [PF00675.22, score=83.5]} {Human: ENSG00000165688, PMPCA, peptidase, mitochondrial processing alpha subunit, [RH, Score=362, Expect=6e-119]} {Mouse: ENSMUSG00000026926, Pmpca, peptidase (mitochondrial processing) alpha, [RH, Score=361, Expect=1e-118]} {Dmel: FBgn0033235, CG8728, [RH, Score=392, Expect=2e-130]} {Celegans: WBGene00022159, mppa-1, Mitochondrial Processing Peptidase Alpha, [RH, Score=292, Expect=2e-92]} {Smed: dd_Smed_v6_5226_0_1, dd_Smed_v6_5226_0_1, [RH, Score=359, Expect=3e-118]} {RNA1509_56845, RNA1509_6967} {RNA1310_13758, RNA1509_56845, RNA1509_6967} {RNA1509_56845, RNA1509_6967, RNA815_4721}
14. MligTC455_21046 472 9.84 Mlig455_012022

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R5: 1.897/0.00007

 TMEM41B 0.953 - 0.953 - - - - Mlig455_012022 {REF} {Length: 3884} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF758) [PF05527.13, score=161.1]; SNARE associated Golgi protein [PF09335.13, score=60.4]; Tetratricopeptide repeat [PF00515.30, score=57.8]; Tetratricopeptide repeat [PF07719.19, score=51.7]; TPR repeat [PF13414.8, score=49.5]; Potential Monad-binding region of RPAP3 [PF13877.8, score=40.2]; Tetratricopeptide repeat [PF13181.8, score=37.5]; Tetratricopeptide repeat [PF13371.8, score=29.8]; Tetratricopeptide repeat [PF13432.8, score=24.4]; Tetratricopeptide repeat [PF13428.8, score=24.0]; Tetratricopeptide repeat [PF14559.8, score=22.1]; Tetratricopeptide repeat [PF13174.8, score=19.8]; Tetratricopeptide repeat [PF13431.8, score=19.0]} {Human: ENSG00000166471, TMEM41B, transmembrane protein 41B, [Score=248, Expect=1e-74]} {Mouse: ENSMUSG00000047554, Tmem41b, transmembrane protein 41B, [Score=256, Expect=9e-78]} {Dmel: FBgn0030850, stas, Stasimon, [Score=210, Expect=7e-61]} {Celegans: WBGene00006520, tag-175, Transmembrane protein 41 homolog, [Score=202, Expect=8e-59]} {Smed: dd_Smed_v6_9137_0_1, dd_Smed_v6_9137_0_1, [RH, Score=150, Expect=4e-39]} {RNA1509_27663} {RNA1310_19235} {RNA815_13394}
15. MligTC455_32457 242 5.03 Mlig455_034415

Neo: -

Age: -

 ELAVL4 0.953 - 0.953 - - - - Mlig455_034415 {REF} {Length: 5574} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=278.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=26.1]; Occluded RNA-recognition motif [PF16842.7, score=26.1]; Nup53/35/40-type RNA recognition motif [PF05172.15, score=22.4]} {Human: ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [Score=192, Expect=2e-54]; ENSG00000196361, ELAVL3, ELAV like RNA binding protein 3, [Score=190, Expect=2e-53]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=190, Expect=4e-53]; ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=187, Expect=1e-52]} {Mouse: ENSMUSG00000028546, Elavl4, ELAV like RNA binding protein 4, [Score=192, Expect=2e-54]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=191, Expect=9e-54]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=190, Expect=2e-53]; ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=189, Expect=1e-53]} {Dmel: FBgn0086675, fne, found in neurons, [Score=191, Expect=3e-54]} {Celegans: WBGene00001368, exc-7, [Score=120, Expect=1e-28]} {Smed: dd_Smed_v6_11311_0_2, dd_Smed_v6_11311_0_2, [Score=112, Expect=1e-26]} {RNA1509_29443, RNA1509_50929, RNA1509_52194} {RNA1310_8489, RNA1509_50929, RNA1509_52194} {RNA1509_50929, RNA1509_52194, RNA815_12096}
16. MligTC455_24709 1244 25.91 Mlig455_005020, Mlig455_005062

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 1.120/0.01887

 0.952 - 0.952 - - - -

Mlig455_005020 {REF} {Length: 1087} {TRANSSPLICED} {RNA1509_13180} {RNA1310_33597.1, RNA1509_13180} {RNA1509_13180, RNA815_34409}

Mlig455_005062 {REF} {Length: 1085} {TRANSSPLICED} {Pfam: Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) [PF05793.14, score=19.7]} {RNA1509_13180} {RNA1310_33597.1} {RNA815_34409}
17. MligTC455_33499 214 4.47 Mlig455_012502, Mlig455_012590

Neo: Irradiation

Age: Down-Up-Up

Region-specific R5: 5.580

Region-enriched R5: 4.822/0.00000

Regeneration-upregulated R4: 5.019

Regeneration-enriched R4: 5.019

 PPP1R3C 0.952 - 0.952 - - - -

Mlig455_012502 {REF} {Length: 2777} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=48.6]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=35.4]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=65.5, Expect=4e-11]; ENSG00000132825, PPP1R3D, protein phosphatase 1 regulatory subunit 3D, [Score=65.5, Expect=3e-11]} {Mouse: ENSMUSG00000049999, Ppp1r3d, protein phosphatase 1, regulatory subunit 3D, [Score=72.4, Expect=7e-14]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=77.8, Expect=5e-15]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=71.6, Expect=1e-13]} {Smed: dd_Smed_v6_8791_0_1, dd_Smed_v6_8791_0_1, [Score=82.0, Expect=3e-17]} {RNA1509_41702} {RNA1310_12486} {RNA815_7332}

Mlig455_012590 {REF} {Length: 2975} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=48.9]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=35.3]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=66.6, Expect=2e-11]; ENSG00000132825, PPP1R3D, protein phosphatase 1 regulatory subunit 3D, [Score=63.5, Expect=1e-10]} {Mouse: ENSMUSG00000049999, Ppp1r3d, protein phosphatase 1, regulatory subunit 3D, [Score=70.1, Expect=4e-13]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=77.8, Expect=4e-15]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=71.6, Expect=1e-13]} {Smed: dd_Smed_v6_8791_0_1, dd_Smed_v6_8791_0_1, [Score=83.2, Expect=1e-17]} {RNA1509_34372, RNA1509_41702} {RNA1310_12486, RNA1509_34372} {RNA1509_34372, RNA815_7332}
18. MligTC455_45652 445 9.27 Mlig455_067879

Neo: -

Age: -

 SCYL2 0.952 - 0.952 - - - - Mlig455_067879 {REF} {Length: 4355} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=54.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=34.3]} {Human: ENSG00000136021, SCYL2, SCY1 like pseudokinase 2, [RH, Score=668, Expect=0.0]} {Mouse: ENSMUSG00000069539, Scyl2, SCY1-like 2 (S. cerevisiae), [RH, Score=672, Expect=0.0]} {Dmel: FBgn0039623, CG1951, [RH, Score=587, Expect=0.0]} {Celegans: WBGene00022635, ZC581.9, [RH, Score=179, Expect=3e-46]} {Smed: dd_Smed_v6_5612_0_1, dd_Smed_v6_5612_0_1, [RH, Score=667, Expect=0.0]} {RNA1509_11052, RNA1509_34278} {RNA1310_4168, RNA1509_34278} {RNA1509_34278, RNA815_3795}
19. MligTC455_17188 620 12.91 Mlig455_001427

Neo: -

Age: Up-Down-Down

 OTOP2 0.951 - - - 0.951 - - Mlig455_001427 {REF} {Length: 4075} {TRANSSPLICED} {Pfam: Otopetrin [PF03189.15, score=232.0]} {Human: ENSG00000183034, OTOP2, otopetrin 2, [Score=55.5, Expect=4e-07]} {Mouse: ENSMUSG00000050201, Otop2, otopetrin 2, [Score=69.3, Expect=1e-11]} {Dmel: FBgn0259150, CG42265, [Score=158, Expect=3e-39]} {Celegans: WBGene00010403, otpl-8, OToPetrin-Like, [Score=115, Expect=2e-26]} {Smed: dd_Smed_v6_13612_0_2, dd_Smed_v6_13612_0_2, [Score=162, Expect=8e-42]} {RNA1509_11389, RNA1509_24948} {RNA1310_7296.2, RNA1509_11389, RNA1509_24948} {RNA1509_11389, RNA1509_24948, RNA815_3560.1}
20. MligTC455_22275 731 15.23 Mlig455_052248

Neo: -

Age: Down-Down-Down

 PKM 0.95 - 0.950 - - - - Mlig455_052248 {REF} {Length: 2995} {TRANSSPLICED} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=530.3]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=107.7]; HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=22.2]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [RH, Score=700, Expect=0.0]; ENSG00000143627, PKLR, pyruvate kinase L/R, [RH, Score=669, Expect=0.0]; ENSG00000262785, PKLR, pyruvate kinase L/R, [RH, Score=669, Expect=0.0]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [RH, Score=698, Expect=0.0]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [RH, Score=659, Expect=0.0]} {Celegans: WBGene00009126, pyk-1, Pyruvate kinase, [RH, Score=639, Expect=0.0]} {Smed: dd_Smed_v6_605_0_1, dd_Smed_v6_605_0_1, [RH, Score=768, Expect=0.0]} {RNA1509_1681, RNA1509_51403} {RNA1310_7731.1, RNA1509_51403} {RNA1509_51403, RNA815_3516.1}
21. MligTC455_24541 38 0.8 Mlig455_022288

Neo: -

Age: -

 HHAT 0.95 - - - 0.950 - - Mlig455_022288 {REF} {Length: 2497} {Pfam: MBOAT, membrane-bound O-acyltransferase family [PF03062.21, score=59.4]} {Human: ENSG00000280680, HHAT, hedgehog acyltransferase, [RH, Score=111, Expect=8e-26]; ENSG00000054392, HHAT, hedgehog acyltransferase, [RH, Score=111, Expect=8e-26]} {Mouse: ENSMUSG00000037375, Hhat, hedgehog acyltransferase, [RH, Score=118, Expect=4e-28]} {Celegans: WBGene00013312, hhat-2, Homolog of Hedgehog AcylTransferase, [RH, Score=110, Expect=1e-25]} {Smed: dd_Smed_v6_14970_0_1, dd_Smed_v6_14970_0_1, [RH, Score=99.0, Expect=6e-22]} {RNA1310_8044} {RNA815_22126}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA