Data search
Results for MligTC455_47179
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47179 | 548 | 11.41 | Mlig455_060507 | Neo: - Age: - |
CTNNB1 | Mlig455_060507 {REF} {Length: 4088} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=53.1]} {Human: ENSG00000168036, CTNNB1, catenin beta 1, [Score=345, Expect=1e-106]} {Mouse: ENSMUSG00000006932, Ctnnb1, catenin (cadherin associated protein), beta 1, [Score=340, Expect=4e-105]} {Dmel: FBgn0000117, arm, armadillo, [Score=339, Expect=2e-105]} {Celegans: WBGene00001979, hmp-2, Beta-catenin-like protein hmp-2, [Score=152, Expect=3e-38]} {Smed: dd_Smed_v6_4850_0_1, dd_Smed_v6_4850_0_1, [Score=200, Expect=2e-56]} {RNA1509_16403} {RNA1310_6005, RNA1509_16403} {RNA1509_16403, RNA815_6676} |
Cumulative graph for MligTC455_47179
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.11 | 3.832 | 0.92275 | 1.00000 | |
| RegionR2 | -0.26 | 3.832 | 0.59056 | 0.94399 | |
| RegionR3 | -0.059 | 3.832 | 0.87778 | 1.00000 | |
| RegionR4 | 0.311 | 3.832 | 0.53372 | 0.85706 | |
| RegionR5 | 0.086 | 3.832 | 0.81132 | 1.00000 | |
| RegionR6 | -0.028 | 3.832 | 0.94301 | 1.00000 | |
| RegionR7 | -0.288 | 3.832 | 0.56888 | 1.00000 | |
| RegionR8 | 0.129 | 3.832 | 0.82805 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.127 | 3.832 | 0.93655 | 1.00000 | |
| RegenerationR2 | 0.28 | 3.832 | 0.48628 | 0.86590 | |
| RegenerationR3 | -0.387 | 3.832 | 0.40879 | 0.80758 | |
| RegenerationR4 | -0.315 | 3.832 | 0.52470 | 0.88162 | |
| RegenerationR5 | -0.345 | 3.832 | 0.43255 | 0.81971 | |
| RegenerationR6 | -0.676 | 3.832 | 0.17008 | 0.50123 | |
| RegenerationBL | -0.145 | 3.832 | 0.79537 | 1.00000 | |
| RegenerationTP | -0.835 | 3.832 | 0.18285 | 0.61905 |
Genes with expression patterns similar to MligTC455_47179
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47179 | 548 | 11.41 | Mlig455_060507 | Neo: - Age: - |
CTNNB1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_060507 {REF} {Length: 4088} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=53.1]} {Human: ENSG00000168036, CTNNB1, catenin beta 1, [Score=345, Expect=1e-106]} {Mouse: ENSMUSG00000006932, Ctnnb1, catenin (cadherin associated protein), beta 1, [Score=340, Expect=4e-105]} {Dmel: FBgn0000117, arm, armadillo, [Score=339, Expect=2e-105]} {Celegans: WBGene00001979, hmp-2, Beta-catenin-like protein hmp-2, [Score=152, Expect=3e-38]} {Smed: dd_Smed_v6_4850_0_1, dd_Smed_v6_4850_0_1, [Score=200, Expect=2e-56]} {RNA1509_16403} {RNA1310_6005, RNA1509_16403} {RNA1509_16403, RNA815_6676} |
| 2. | MligTC455_06620 | 200 | 4.16 | Mlig455_004955 | Neo: - Age: Up-Down-Down Region-enriched R2: 3.101/0.00930 |
1.689 | - | - | - | 0.735 | - | 0.954 | Mlig455_004955 {REF} {Length: 3483} {RNA1509_40456} {RNA1310_2192.1} {RNA815_16881} | |
| 3. | MligTC455_48688 | 206 | 4.3 | Mlig455_067520 | Neo: - Age: - Region-enriched R4: 5.245/0.00198 |
1.671 | - | - | - | 0.717 | - | 0.954 | Mlig455_067520 {REF} {Length: 3162} {RNA1509_30353} {RNA1310_6980.1} {RNA815_2192} | |
| 4. | MligTC455_52201 | 712 | 14.84 | Mlig455_000379 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 3.455 Region-enriched R4: 2.637/0.00000 Regeneration-downregulated R4: -1.839 Regeneration-depleted R4: -1.839 |
CHEK2 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_000379 {REF} {Length: 2826} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=205.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=111.0]; FHA domain [PF00498.28, score=45.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=25.5]; Kinase-like [PF14531.8, score=19.4]; ABC1 atypical kinase-like domain [PF03109.18, score=19.2]} {Human: ENSG00000183765, CHEK2, checkpoint kinase 2, [Score=231, Expect=1e-67]} {Mouse: ENSMUSG00000029521, Chek2, checkpoint kinase 2, [Score=226, Expect=7e-66]} {Dmel: FBgn0019686, lok, loki, [Score=219, Expect=3e-64]} {Celegans: WBGene00000499, chk-2, Serine/threonine-protein kinase chk-2, [Score=174, Expect=1e-47]} {Smed: dd_Smed_v6_6620_0_1, dd_Smed_v6_6620_0_1, [Score=234, Expect=2e-70]} {RNA1509_3579} {RNA1310_6215, RNA1509_3579} {RNA1509_3579, RNA815_2071.1} |
| 5. | MligTC455_38436 | 67 | 1.39 | Mlig455_052877, Mlig455_052881 | Neo: - Age: - |
PIK3CA | 0.955 | - | - | - | - | - | 0.955 | Mlig455_052877 {REF} {Length: 6761} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=164.4]; Phosphoinositide 3-kinase family, accessory domain (PIK domain) [PF00613.22, score=138.3]; Leucine-rich repeat [PF14580.8, score=72.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=71.1]; Leucine rich repeat [PF13855.8, score=58.0]; Phosphoinositide 3-kinase C2 [PF00792.26, score=55.7]; PI3-kinase family, p85-binding domain [PF02192.18, score=53.4]; PI3-kinase family, ras-binding domain [PF00794.20, score=43.0]} {Human: ENSG00000121879, PIK3CA, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [RH, Score=663, Expect=0.0]} {Mouse: ENSMUSG00000027665, Pik3ca, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [RH, Score=660, Expect=0.0]} {Dmel: FBgn0015279, Pi3K92E, [RH, Score=430, Expect=8e-128]} {Celegans: WBGene00000090, age-1, Phosphatidylinositol 3-kinase age-1, [RH, Score=340, Expect=2e-96]} {Smed: dd_Smed_v6_8025_0_1, dd_Smed_v6_8025_0_1, [RH, Score=566, Expect=6e-178]} {RNA1509_9204} {RNA1310_2625.2} {RNA815_1006} Mlig455_052881 {REF} {Length: 2196} {TRANSSPLICED} {Pfam: Phosphoinositide 3-kinase C2 [PF00792.26, score=59.6]} {Human: ENSG00000121879, PIK3CA, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=85.9, Expect=4e-17]} {Mouse: ENSMUSG00000027665, Pik3ca, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=84.3, Expect=7e-17]} {Smed: dd_Smed_v6_8025_0_1, dd_Smed_v6_8025_0_1, [Score=65.9, Expect=3e-11]} {RNA1509_9204} {RNA1310_2625.2} {RNA815_1006} |
| 6. | MligTC455_47750 | 356 | 7.41 | Mlig455_004204 | Neo: - Age: - |
TEAD1 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_004204 {REF} {Length: 3045} {TRANSSPLICED} {Pfam: YAP binding domain [PF17725.3, score=193.7]; TEA/ATTS domain [PF01285.20, score=93.2]} {Human: ENSG00000187079, TEAD1, TEA domain transcription factor 1, [RH, Score=412, Expect=2e-141]; ENSG00000007866, TEAD3, TEA domain transcription factor 3, [RH, Score=409, Expect=4e-140]; ENSG00000074219, TEAD2, TEA domain transcription factor 2, [RH, Score=392, Expect=2e-133]} {Mouse: ENSMUSG00000055320, Tead1, TEA domain family member 1, [RH, Score=411, Expect=2e-141]; ENSMUSG00000030353, Tead4, TEA domain family member 4, [RH, Score=405, Expect=7e-139]; ENSMUSG00000002249, Tead3, TEA domain family member 3, [RH, Score=394, Expect=9e-134]} {Dmel: FBgn0003345, sd, scalloped, [Score=323, Expect=9e-108]} {Celegans: WBGene00001208, egl-44, Transcription enhancer factor-like protein egl-44, [Score=246, Expect=2e-77]} {Smed: dd_Smed_v6_11935_0_1, dd_Smed_v6_11935_0_1, [Score=249, Expect=3e-78]} {RNA1509_43188, RNA1509_6318} {RNA1310_6355.1, RNA1509_43188, RNA1509_6318} {RNA1509_43188, RNA1509_6318, RNA815_9229} |