TomoSeq data search

Data search

Results for MligTC455_47195

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47195

387

8.07

Mlig455_024335

Neo: -

Age: -

Mlig455_024335 {REF} {Length: 2956} {TRANSSPLICED} {RNA1509_36636, RNA1509_59424} {RNA1310_5881, RNA1509_36636} {RNA1509_36636, RNA815_13594}

Cumulative graph for MligTC455_47195

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.033	3.323	0.98194	1.00000
RegionR2	-0.286	3.323	0.59405	0.94616
RegionR3	-0.476	3.323	0.29770	0.83984
RegionR4	0.85	3.323	0.12843	0.36255
RegionR5	-0.337	3.323	0.44093	0.80182
RegionR6	0.075	3.323	0.86516	1.00000
RegionR7	-0.504	3.323	0.41868	1.00000
RegionR8	0.709	3.323	0.26276	0.88486

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.263	3.323	0.21191	0.95076
RegenerationR2	-1.082	3.323	0.01383	0.19231
RegenerationR3	-0.088	3.323	0.85437	0.99929
RegenerationR4	-1.315	3.323	0.01135	0.16275
RegenerationR5	-0.184	3.323	0.69005	0.94790
RegenerationR6	-1.34	3.323	0.01125	0.13071
RegenerationBL	0.311	3.323	0.56796	0.92181
RegenerationTP	-1.128	3.323	0.09522	0.48387

Genes with expression patterns similar to MligTC455_47195

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47195	387	8.07	Mlig455_024335	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024335 {REF} {Length: 2956} {TRANSSPLICED} {RNA1509_36636, RNA1509_59424} {RNA1310_5881, RNA1509_36636} {RNA1509_36636, RNA815_13594}
2.	MligTC455_30219	2171	45.24	Mlig455_024942, Mlig455_036959, Mlig455_051025	Neo: - Age: Down-Up-Down		1.829	-	-	-	0.954	-	0.875	Mlig455_024942 {REF} {Length: 834} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1} Mlig455_036959 {REF} {Length: 1398} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.9]} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1} Mlig455_051025 {REF} {Length: 681} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58464} {RNA1310_34211} {RNA815_2198.1}
3.	MligTC455_43272	467	9.73	Mlig455_007706, Mlig455_021038	Neo: - Age: - Region-enriched R4: 2.849/0.04948 Regeneration-upregulated BL: 3.619 Regeneration-enriched BL: 3.619		1.756	0.789	-	-	0.967	-	-	Mlig455_007706 {REF} {Length: 2491} {Pfam: Galactose binding lectin domain [PF02140.20, score=41.5]} {RNA1509_51594} {RNA1310_25581} {RNA815_37571} Mlig455_021038 {REF} {Length: 3071} {Pfam: Galactose binding lectin domain [PF02140.20, score=41.6]} {RNA1509_51594} {RNA1310_25581, RNA1509_51594} {RNA1509_51594, RNA815_37571}
4.	MligTC455_50156	379	7.9	Mlig455_061886	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.454 Regeneration-upregulated BL: 2.171 Regeneration-enriched BL: 2.171	BEST2	1.738	0.788	-	-	0.950	-	-	Mlig455_061886 {REF} {Length: 2189} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=157.1]} {Human: ENSG00000039987, BEST2, bestrophin 2, [Score=102, Expect=2e-22]} {Mouse: ENSMUSG00000052819, Best2, bestrophin 2, [Score=102, Expect=5e-23]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=181, Expect=1e-49]} {Celegans: WBGene00014989, best-23, Bestrophin homolog, [Score=144, Expect=3e-38]} {Smed: dd_Smed_v6_3859_0_1, dd_Smed_v6_3859_0_1, [Score=233, Expect=5e-71]} {RNA1509_12991, RNA1509_40942} {RNA1310_14129.1, RNA1509_12991, RNA1509_40942} {RNA1509_12991, RNA1509_40942, RNA815_5240}
5.	MligTC455_51226	355	7.4	Mlig455_019150	Neo: - Age: logFC(26M/2M)=-0.268	MFSD6	1.737	-	-	-	0.958	-	0.779	Mlig455_019150 {REF} {Length: 2771} {TRANSSPLICED} {Pfam: MFS_1 like family [PF12832.9, score=201.2]; Major Facilitator Superfamily [PF07690.18, score=71.9]; Nucleoside H+ symporter [PF03825.18, score=42.7]; LacY proton/sugar symporter [PF01306.21, score=33.7]} {Human: ENSG00000151690, MFSD6, major facilitator superfamily domain containing 6, [Score=48.5, Expect=4e-06]} {Dmel: FBgn0036191, Sugb, Sugar baby, [RH, Score=139, Expect=9e-35]} {Smed: dd_Smed_v6_14524_0_1, dd_Smed_v6_14524_0_1, [RH, Score=154, Expect=2e-40]} {RNA1509_11813, RNA1509_32646, RNA1509_49180} {RNA1310_11864, RNA1509_11813, RNA1509_32646, RNA1509_49180} {RNA1509_11813, RNA1509_32646, RNA1509_49180, RNA815_4659}
6.	MligTC455_31754	184	3.83	Mlig455_009000	Neo: - Age: Up-Down-Up	ATP6V1E1	1.707	-	-	0.741	0.966	-	-	Mlig455_009000 {REF} {Length: 2323} {TRANSSPLICED} {Pfam: ATP synthase (E/31 kDa) subunit [PF01991.20, score=147.7]} {Human: ENSG00000131100, ATP6V1E1, ATPase H+ transporting V1 subunit E1, [Score=199, Expect=1e-64]} {Mouse: ENSMUSG00000019210, Atp6v1e1, ATPase, H+ transporting, lysosomal V1 subunit E1, [Score=197, Expect=5e-64]} {Dmel: FBgn0283535, Vha26, Vacuolar H[+]-ATPase 26kD subunit, [Score=202, Expect=8e-66]} {Celegans: WBGene00006917, vha-8, Vacuolar H ATPase, [Score=203, Expect=2e-66]} {Smed: dd_Smed_v6_1369_0_1, dd_Smed_v6_1369_0_1, [Score=176, Expect=7e-56]} {RNA1509_51032, RNA1509_51700} {RNA1310_40144, RNA1509_51032, RNA1509_51700} {RNA1509_51032, RNA1509_51700, RNA815_17454}
7.	MligTC455_37343	240	4.99	Mlig455_024086	Neo: - Age: Up-Down-Up Region-enriched R8: 2.659/0.04266		1.687	0.734	-	-	0.953	-	-	Mlig455_024086 {REF} {Length: 4209} {RNA1509_36528, RNA1509_59718} {RNA1310_12514, RNA1509_36528, RNA1509_59718} {RNA1509_36528, RNA1509_59718, RNA815_21020}
8.	MligTC455_25654	389	8.11	Mlig455_000129, Mlig455_027212, Mlig455_028212, Mlig455_028213, Mlig455_028214, Mlig455_039873, Mlig455_064984	Neo: - Age: - Region-enriched R4: 2.312/0.04499		1.67	-	-	-	0.954	-	0.716	Mlig455_000129 {REF} {Length: 1124} {Celegans: WBGene00007723, C25F9.2, [Score=62.0, Expect=8e-11]} {RNA1310_7131} {RNA815_8935} Mlig455_027212 {REF} {Length: 2742} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=139.5]} {Celegans: WBGene00007723, C25F9.2, [Score=313, Expect=4e-91]} {RNA1310_7131} {RNA815_8935} Mlig455_028212 {REF} {Length: 638} {NoTransDecoderORF} {RNA1509_31372} {RNA1310_7131} {RNA815_8935} Mlig455_028213 {REF} {Length: 1119} {Celegans: WBGene00007723, C25F9.2, [Score=78.2, Expect=1e-16]} {RNA1310_7131} {RNA815_8935} Mlig455_028214 {REF} {Length: 1116} {Celegans: WBGene00007723, C25F9.2, [Score=78.2, Expect=1e-16]} {RNA1310_7131} {RNA815_8935} Mlig455_039873 {REF} {Length: 3987} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=89.9]} {Celegans: WBGene00007723, C25F9.2, [Score=291, Expect=4e-82]} {RNA1310_7131} {RNA815_8935} Mlig455_064984 {REF} {Length: 2969} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=136.0]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=373, Expect=3e-111]} {RNA1310_7131} {RNA815_8935}
9.	MligTC455_49019	224	4.66	Mlig455_056901	Neo: - Age: Up-Down-Down		0.974	-	-	-	0.974	-	-	Mlig455_056901 {REF} {Length: 1656} {RNA1509_49330, RNA1509_50020} {RNA1310_42965, RNA1509_49330} {RNA1509_49330, RNA815_21375.1}
10.	MligTC455_48152	214	4.45	Mlig455_044148, Mlig455_044160	Neo: - Age: -	RPIA	0.969	-	-	-	0.969	-	-	Mlig455_044148 {REF} {Length: 1713} {TRANSSPLICED} {Pfam: Ribose 5-phosphate isomerase A (phosphoriboisomerase A) [PF06026.16, score=197.8]} {Human: ENSG00000153574, RPIA, ribose 5-phosphate isomerase A, [RH, Score=253, Expect=1e-83]} {Mouse: ENSMUSG00000053604, Rpia, ribose 5-phosphate isomerase A, [RH, Score=254, Expect=3e-84]} {Dmel: FBgn0050410, Rpi, Ribose-5-phosphate isomerase, [RH, Score=203, Expect=3e-65]} {Celegans: WBGene00015101, rpia-1, Probable-ribose 5-phosphate isomerase, [RH, Score=175, Expect=3e-54]} {Smed: dd_Smed_v6_12956_0_2, dd_Smed_v6_12956_0_2, [Score=247, Expect=1e-82]} {RNA1509_26023} {RNA1310_18063.1, RNA1509_26023} {RNA1509_26023, RNA815_6995.1} Mlig455_044160 {REF} {Length: 1605} {TRANSSPLICED} {Pfam: Ribose 5-phosphate isomerase A (phosphoriboisomerase A) [PF06026.16, score=159.5]} {Human: ENSG00000153574, RPIA, ribose 5-phosphate isomerase A, [Score=226, Expect=4e-73]} {Mouse: ENSMUSG00000053604, Rpia, ribose 5-phosphate isomerase A, [Score=228, Expect=3e-74]} {Dmel: FBgn0050410, Rpi, Ribose-5-phosphate isomerase, [Score=175, Expect=1e-54]} {Celegans: WBGene00015101, rpia-1, Probable-ribose 5-phosphate isomerase, [Score=148, Expect=7e-44]} {Smed: dd_Smed_v6_12956_0_2, dd_Smed_v6_12956_0_2, [Score=215, Expect=3e-70]} {RNA1509_26023} {RNA1310_18506.1} {RNA815_6995.1}
11.	MligTC455_43007	337	7.02	Mlig455_033852	Neo: - Age: - Region-enriched R7: 2.523/0.04188	IGFALS	0.967	-	-	-	0.967	-	-	Mlig455_033852 {REF} {Length: 3087} {Pfam: Leucine rich repeat [PF13855.8, score=256.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=115.7]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=96.4]; Leucine-rich repeat [PF14580.8, score=48.1]; Leucine Rich Repeat [PF00560.35, score=36.7]} {Human: ENSG00000099769, IGFALS, insulin like growth factor binding protein acid labile subunit, [Score=164, Expect=4e-42]} {Mouse: ENSMUSG00000046070, Igfals, insulin-like growth factor binding protein, acid labile subunit, [Score=159, Expect=2e-40]} {Dmel: FBgn0034476, Toll-7, [RH, Score=137, Expect=1e-32]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=122, Expect=2e-28]} {Smed: dd_Smed_v6_6669_0_1, dd_Smed_v6_6669_0_1, [RH, Score=120, Expect=6e-28]} {RNA1509_44542, RNA1509_8804} {RNA1310_5185, RNA1509_44542, RNA1509_8804} {RNA1509_44542, RNA1509_8804, RNA815_1543.1}
12.	MligTC455_33975	378	7.87	Mlig455_051791	Neo: - Age: -	CTNND2	0.966	-	-	-	0.966	-	-	Mlig455_051791 {REF} {Length: 5163} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=70.2]; HEAT repeats [PF13646.8, score=24.2]} {Human: ENSG00000169862, CTNND2, catenin delta 2, [Score=295, Expect=2e-85]; ENSG00000144283, PKP4, plakophilin 4, [Score=284, Expect=4e-80]} {Mouse: ENSMUSG00000022240, Ctnnd2, catenin (cadherin associated protein), delta 2, [Score=294, Expect=1e-83]; ENSMUSG00000026991, Pkp4, plakophilin 4, [Score=285, Expect=2e-80]; ENSMUSG00000098615, Arvcf, armadillo repeat deleted in velocardiofacial syndrome, [Score=282, Expect=1e-80]; ENSMUSG00000000325, Arvcf, armadillo repeat gene deleted in velocardiofacial syndrome, [Score=282, Expect=7e-81]} {Dmel: FBgn0260799, p120ctn, Adherens junction protein p120, [Score=327, Expect=2e-98]} {Celegans: WBGene00002175, jac-1, Juxtamembrane domain-associated catenin, [Score=245, Expect=7e-68]} {Smed: dd_Smed_v6_6256_0_1, dd_Smed_v6_6256_0_1, [RH, Score=238, Expect=4e-66]} {RNA1509_30700, RNA1509_6533} {RNA1310_5357, RNA1509_30700, RNA1509_6533} {RNA1509_30700, RNA1509_6533, RNA815_401.1}
13.	MligTC455_49248	321	6.69	Mlig455_018133	Neo: - Age: -	CASKIN1	0.962	-	-	-	0.962	-	-	Mlig455_018133 {REF} {Length: 1756} {TRANSSPLICED} {Pfam: Ankyrin repeat [PF00023.32, score=48.4]; Ankyrin repeats (3 copies) [PF12796.9, score=42.6]; Ankyrin repeats (many copies) [PF13857.8, score=37.3]; Ankyrin repeat [PF13606.8, score=36.1]; Ankyrin repeats (many copies) [PF13637.8, score=31.9]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=52.0, Expect=2e-06]; ENSG00000144031, ANKRD53, ankyrin repeat domain 53, [Score=50.4, Expect=4e-06]; ENSG00000151150, ANK3, ankyrin 3, [Score=49.7, Expect=1e-05]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=52.4, Expect=8e-07]; ENSMUSG00000106824, Gm7697, predicted gene 7697, [Score=51.2, Expect=1e-06]; ENSMUSG00000107280, Gm9495, predicted gene 9495, [Score=51.2, Expect=1e-06]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=50.4, Expect=4e-06]} {Dmel: FBgn0052343, Atac3, Ada2a-containing complex component 3, [Score=59.3, Expect=4e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=52.8, Expect=4e-07]} {Smed: dd_Smed_v6_8140_0_1, dd_Smed_v6_8140_0_1, [RH, Score=57.0, Expect=4e-09]} {RNA1509_38678} {RNA1310_26942} {RNA815_20724}
14.	MligTC455_30374	175	3.65	Mlig455_011748, Mlig455_070004	Neo: - Age: Down-Up-Down		0.959	-	-	-	0.959	-	-	Mlig455_011748 {REF} {Length: 2428} {Pfam: CUB domain [PF00431.22, score=21.7]} {RNA1509_26683} {RNA1310_43894} {RNA815_47918} Mlig455_070004 {REF} {Length: 4760} {Pfam: DEK C terminal domain [PF08766.13, score=21.4]} {RNA1509_23859} {RNA1310_25192} {RNA815_24957.1}
15.	MligTC455_08781	795	16.57	Mlig455_004020, Mlig455_004051, Mlig455_004104	Neo: - Age: Up-Down-Down Region-enriched R2: 1.753/0.01741 Region-enriched R5: 1.075/0.03323	UBR5	0.951	-	-	-	0.951	-	-	Mlig455_004020 {REF} {Length: 900} {NoTransDecoderORF} {RNA1509_29921} {RNA1310_12070} {RNA815_9938} Mlig455_004051 {REF} {Length: 10870} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=204.4]; Poly-adenylate binding protein, unique domain [PF00658.20, score=70.9]} {Human: ENSG00000104517, UBR5, ubiquitin protein ligase E3 component n-recognin 5, [RH, Score=568, Expect=3e-164]} {Mouse: ENSMUSG00000037487, Ubr5, ubiquitin protein ligase E3 component n-recognin 5, [RH, Score=568, Expect=5e-164]} {Dmel: FBgn0002431, hyd, hyperplastic discs, [RH, Score=576, Expect=1e-166]} {Celegans: WBGene00009460, ubr-5, UBR E3 ubiquitin ligase homolog, [RH, Score=250, Expect=3e-66]} {Smed: dd_Smed_v6_7658_0_1, dd_Smed_v6_7658_0_1, [RH, Score=474, Expect=1e-134]} {RNA1509_29921, RNA1509_4055} {RNA1310_350, RNA1509_29921, RNA1509_4055} {RNA1509_29921, RNA1509_4055, RNA815_1156} Mlig455_004104 {REF} {Length: 10283} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=204.2]; E3 ubiquitin ligase EDD [PF11547.10, score=98.2]; Poly-adenylate binding protein, unique domain [PF00658.20, score=70.7]} {Human: ENSG00000104517, UBR5, ubiquitin protein ligase E3 component n-recognin 5, [RH, Score=751, Expect=0.0]} {Mouse: ENSMUSG00000037487, Ubr5, ubiquitin protein ligase E3 component n-recognin 5, [RH, Score=754, Expect=0.0]} {Dmel: FBgn0002431, hyd, hyperplastic discs, [RH, Score=575, Expect=3e-165]} {Celegans: WBGene00009460, ubr-5, UBR E3 ubiquitin ligase homolog, [RH, Score=249, Expect=1e-65]} {Smed: dd_Smed_v6_7658_0_1, dd_Smed_v6_7658_0_1, [RH, Score=473, Expect=1e-133]} {RNA1509_4055, RNA1509_41572, RNA1509_9074} {RNA1310_350, RNA1509_41572, RNA1509_9074} {RNA1509_41572, RNA1509_9074, RNA815_1156}
16.	MligTC455_39812	95	1.98	Mlig455_045935	Neo: - Age: -	SLC17A8	0.951	-	-	-	0.951	-	-	Mlig455_045935 {REF} {Length: 3220} {Pfam: Major Facilitator Superfamily [PF07690.18, score=170.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=20.5]} {Human: ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [RH, Score=540, Expect=0.0]; ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [RH, Score=540, Expect=0.0]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [RH, Score=529, Expect=0.0]} {Mouse: ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [RH, Score=543, Expect=0.0]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [RH, Score=541, Expect=0.0]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [RH, Score=528, Expect=0.0]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [RH, Score=492, Expect=1e-166]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [RH, Score=476, Expect=2e-161]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_38152} {RNA1310_33327} {RNA815_25224}
17.	MligTC455_53267	296	6.17	Mlig455_012795	Neo: Irradiation Age: -	CDC5L	0.951	-	-	-	0.951	-	-	Mlig455_012795 {REF} {Length: 2369} {Pfam: pre-mRNA splicing factor component [PF11831.10, score=68.2]; WSC domain [PF01822.21, score=57.6]} {Human: ENSG00000096401, CDC5L, cell division cycle 5 like, [Score=219, Expect=3e-63]} {Mouse: ENSMUSG00000023932, Cdc5l, cell division cycle 5-like (S. pombe), [Score=216, Expect=2e-62]; ENSMUSG00000112252, Gm32802, predicted gene, 32802, [Score=216, Expect=2e-62]; ENSMUSG00000112216, Gm32717, predicted gene, 32717, [Score=216, Expect=2e-62]} {Dmel: FBgn0265574, Cdc5, Cell division cycle 5, [Score=199, Expect=2e-56]} {Celegans: WBGene00008386, cdc-5L, Cell Division Cycle related, [Score=108, Expect=3e-25]} {Smed: dd_Smed_v6_4163_0_1, dd_Smed_v6_4163_0_1, [Score=164, Expect=5e-44]} {RNA1509_47678} {RNA1310_5017} {RNA815_19593}
18.	MligTC455_31589	281	5.85	Mlig455_061267, Mlig455_062654	Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 2.632/0.00015		0.95	-	-	-	0.950	-	-	Mlig455_061267 {REF} {Length: 2572} {TRANSSPLICED} {RNA1509_28161} {RNA1310_8643} {RNA815_2213} Mlig455_062654 {REF} {Length: 2995} {TRANSSPLICED} {RNA1509_28161} {RNA1310_8643} {RNA815_2213}
19.	MligTC455_49936	134	2.79	Mlig455_025477, Mlig455_033596	Neo: - Age: Down-Up-Down Region-enriched R3: 2.907/0.03091		0.95	-	-	-	0.950	-	-	Mlig455_025477 {REF} {Length: 934} {RNA1310_65296} {RNA815_34444} Mlig455_033596 {REF} {Length: 936} {RNA1310_65296} {RNA815_34444}

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