Data search
Results for MligTC455_47212
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47212 | 182 | 3.79 | Mlig455_044606 | Neo: Irradiation Age: - |
TRPC4AP | Mlig455_044606 {REF} {Length: 5242} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3689) [PF12463.10, score=295.3]} {Human: ENSG00000100991, TRPC4AP, transient receptor potential cation channel subfamily C member 4 associated protein, [RH, Score=321, Expect=4e-96]} {Mouse: ENSMUSG00000038324, Trpc4ap, transient receptor potential cation channel, subfamily C, member 4 associated protein, [RH, Score=326, Expect=3e-98]} {RNA1509_19391} {RNA1310_5344.1, RNA1509_19391} {RNA1509_19391, RNA815_1334} |
Cumulative graph for MligTC455_47212
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.157 | 2.654 | 0.90131 | 1.00000 | |
| RegionR2 | 0.928 | 2.654 | 0.24353 | 0.61977 | |
| RegionR3 | -0.443 | 2.654 | 0.41919 | 0.94359 | |
| RegionR4 | -1.806 | 2.654 | 0.02053 | 0.10408 | |
| RegionR5 | 0.901 | 2.654 | 0.03605 | 0.14784 | |
| RegionR6 | -0.967 | 2.654 | 0.10412 | 0.59243 | |
| RegionR7 | 1.245 | 2.654 | 0.10040 | 0.60538 | |
| RegionR8 | 0.298 | 2.654 | 0.78565 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.347 | 2.654 | 0.46252 | 1.00000 | |
| RegenerationR2 | -0.31 | 2.654 | 0.64784 | 0.93520 | |
| RegenerationR3 | 0.054 | 2.654 | 0.93796 | 1.00000 | |
| RegenerationR4 | 0.35 | 2.654 | 0.63335 | 0.92455 | |
| RegenerationR5 | -0.791 | 2.654 | 0.17264 | 0.60157 | |
| RegenerationR6 | 1.561 | 2.654 | 0.03364 | 0.22953 | |
| RegenerationBL | 0.898 | 2.654 | 0.31904 | 0.68619 | |
| RegenerationTP | -2.155 | 2.654 | 0.11226 | 0.51479 |
Genes with expression patterns similar to MligTC455_47212
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47212 | 182 | 3.79 | Mlig455_044606 | Neo: Irradiation Age: - |
TRPC4AP | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044606 {REF} {Length: 5242} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3689) [PF12463.10, score=295.3]} {Human: ENSG00000100991, TRPC4AP, transient receptor potential cation channel subfamily C member 4 associated protein, [RH, Score=321, Expect=4e-96]} {Mouse: ENSMUSG00000038324, Trpc4ap, transient receptor potential cation channel, subfamily C, member 4 associated protein, [RH, Score=326, Expect=3e-98]} {RNA1509_19391} {RNA1310_5344.1, RNA1509_19391} {RNA1509_19391, RNA815_1334} |
| 2. | MligTC455_27881 | 54 | 1.12 | Mlig455_062466 | Neo: - |
0.954 | - | - | 0.954 | - | - | - | Mlig455_062466 {REF} {Length: 5589} {Pfam: Mab-21 protein [PF03281.16, score=30.3]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1} | |
| 3. | MligTC455_52037 | 158 | 3.3 | Mlig455_004185 | Neo: - Age: - |
PIAS2 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_004185 {REF} {Length: 4387} {TRANSSPLICED} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=65.3]; PINIT domain [PF14324.8, score=42.7]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=21.9]} {Human: ENSG00000078043, PIAS2, protein inhibitor of activated STAT 2, [Score=93.2, Expect=4e-19]} {Mouse: ENSMUSG00000025423, Pias2, protein inhibitor of activated STAT 2, [Score=93.6, Expect=2e-19]} {Dmel: FBgn0003612, Su(var)2-10, Suppressor of variegation 2-10, [Score=105, Expect=3e-23]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=87.4, Expect=1e-17]} {Smed: dd_Smed_v6_10185_0_1, dd_Smed_v6_10185_0_1, [Score=99.8, Expect=2e-21]} {RNA1509_24763, RNA1509_34035, RNA1509_42955} {RNA1310_5130, RNA1509_24763, RNA1509_34035} {RNA1509_24763, RNA1509_34035, RNA815_10497} |
| 4. | MligTC455_15613 | 850 | 17.7 | Mlig455_053952, Mlig455_060629 | Neo: - Age: - |
GOLT1A | 0.95 | - | - | - | - | 0.950 | - | Mlig455_053952 {REF} {Length: 892} {NoTransDecoderORF} {RNA1509_27476} {RNA1310_24296.1} {RNA815_10473} Mlig455_060629 {REF} {Length: 1087} {TRANSSPLICED} {Pfam: Got1/Sft2-like family [PF04178.14, score=58.3]} {Human: ENSG00000174567, GOLT1A, golgi transport 1A, [RH, Score=120, Expect=9e-36]} {Mouse: ENSMUSG00000098306, Gm28040, predicted gene, 28040, [RH, Score=125, Expect=6e-38]; ENSMUSG00000103421, Golt1a, golgi transport 1A, [RH, Score=125, Expect=6e-38]} {Dmel: FBgn0052576, CG32576, [RH, Score=132, Expect=2e-40]} {Celegans: WBGene00018270, F41C3.4, Probable Golgi transport protein 1, [RH, Score=114, Expect=2e-33]} {Smed: dd_Smed_v6_5105_0_1, dd_Smed_v6_5105_0_1, [RH, Score=139, Expect=3e-43]} {RNA1509_24282} {RNA1310_24296.1} {RNA815_10473} |
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