TomoSeq data search

Data search

Results for MligTC455_47218

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47218

903

18.82

Mlig455_006667, Mlig455_006715

Neo: -

Age: -

LRRC34

Mlig455_006667 {REF} {Length: 4326} {Pfam: Leucine Rich repeat [PF13516.8, score=102.9]; Leucine rich repeat [PF13855.8, score=23.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.4]; Leucine Rich Repeat [PF00560.35, score=21.6]} {Human: ENSG00000171757, LRRC34, leucine rich repeat containing 34, [RH, Score=286, Expect=2e-91]} {Mouse: ENSMUSG00000027702, Lrrc34, leucine rich repeat containing 34, [RH, Score=335, Expect=2e-111]} {Dmel: FBgn0033369, CG8197, [RH, Score=59.7, Expect=2e-09]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=54.3, Expect=1e-07]} {Smed: dd_Smed_v6_9926_1_1, dd_Smed_v6_9926_1_1, [RH, Score=382, Expect=5e-130]} {RNA1509_24292, RNA1509_9806} {RNA1310_21676.1, RNA1509_24292} {RNA1509_24292, RNA815_6669}

Mlig455_006715 {REF} {Length: 2728} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=106.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=26.1]; Leucine rich repeat [PF13855.8, score=23.8]; Leucine Rich Repeat [PF00560.35, score=23.6]} {Human: ENSG00000171757, LRRC34, leucine rich repeat containing 34, [RH, Score=286, Expect=9e-92]} {Mouse: ENSMUSG00000027702, Lrrc34, leucine rich repeat containing 34, [RH, Score=338, Expect=6e-113]} {Dmel: FBgn0033369, CG8197, [RH, Score=58.2, Expect=6e-09]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_9926_1_1, dd_Smed_v6_9926_1_1, [RH, Score=384, Expect=2e-131]} {RNA1509_32379, RNA1509_9806} {RNA1310_21676.1, RNA1509_32379} {RNA1509_32379, RNA815_6669}

Cumulative graph for MligTC455_47218

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.799	4.514	0.10659	0.68364
RegionR2	1.306	4.514	0.00461	0.06084
RegionR3	0.594	4.514	0.10847	0.57368
RegionR4	-0.053	4.514	0.91141	1.00000
RegionR5	-0.544	4.514	0.15299	0.40849
RegionR6	-0.487	4.514	0.24095	0.82607
RegionR7	0.595	4.514	0.15510	0.72816
RegionR8	0.388	4.514	0.42174	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.569	4.514	0.27031	0.97364
RegenerationR2	-0.294	4.514	0.44490	0.84303
RegenerationR3	0.061	4.514	0.88933	1.00000
RegenerationR4	0.365	4.514	0.43224	0.83187
RegenerationR5	0.469	4.514	0.28496	0.71353
RegenerationR6	0.63	4.514	0.19104	0.52918
RegenerationBL	-0.72	4.514	0.20226	0.54135
RegenerationTP	-0.172	4.514	0.74562	1.00000

Genes with expression patterns similar to MligTC455_47218

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47218	903	18.82	Mlig455_006667, Mlig455_006715	Neo: - Age: -	LRRC34	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_006667 {REF} {Length: 4326} {Pfam: Leucine Rich repeat [PF13516.8, score=102.9]; Leucine rich repeat [PF13855.8, score=23.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.4]; Leucine Rich Repeat [PF00560.35, score=21.6]} {Human: ENSG00000171757, LRRC34, leucine rich repeat containing 34, [RH, Score=286, Expect=2e-91]} {Mouse: ENSMUSG00000027702, Lrrc34, leucine rich repeat containing 34, [RH, Score=335, Expect=2e-111]} {Dmel: FBgn0033369, CG8197, [RH, Score=59.7, Expect=2e-09]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=54.3, Expect=1e-07]} {Smed: dd_Smed_v6_9926_1_1, dd_Smed_v6_9926_1_1, [RH, Score=382, Expect=5e-130]} {RNA1509_24292, RNA1509_9806} {RNA1310_21676.1, RNA1509_24292} {RNA1509_24292, RNA815_6669} Mlig455_006715 {REF} {Length: 2728} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=106.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=26.1]; Leucine rich repeat [PF13855.8, score=23.8]; Leucine Rich Repeat [PF00560.35, score=23.6]} {Human: ENSG00000171757, LRRC34, leucine rich repeat containing 34, [RH, Score=286, Expect=9e-92]} {Mouse: ENSMUSG00000027702, Lrrc34, leucine rich repeat containing 34, [RH, Score=338, Expect=6e-113]} {Dmel: FBgn0033369, CG8197, [RH, Score=58.2, Expect=6e-09]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_9926_1_1, dd_Smed_v6_9926_1_1, [RH, Score=384, Expect=2e-131]} {RNA1509_32379, RNA1509_9806} {RNA1310_21676.1, RNA1509_32379} {RNA1509_32379, RNA815_6669}
2.	MligTC455_20950	627	13.07	Mlig455_050106	Neo: - Age: Down-Up-Down Region-enriched R3: 2.515/0.04514 Region-enriched R4: 2.442/0.02726 Region-enriched R5: 2.428/0.01869	DNAL4	2.422	-	0.729	0.743	0.950	-	-	Mlig455_050106 {REF} {Length: 761} {Pfam: Dynein light chain type 1 [PF01221.20, score=95.1]} {Human: ENSG00000100246, DNAL4, dynein axonemal light chain 4, [RH, Score=160, Expect=4e-52]} {Mouse: ENSMUSG00000022420, Dnal4, dynein, axonemal, light chain 4, [RH, Score=160, Expect=2e-52]} {Dmel: FBgn0033687, CG8407, [RH, Score=147, Expect=2e-47]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=68.2, Expect=2e-16]} {Smed: dd_Smed_v6_2487_0_1, dd_Smed_v6_2487_0_1, [RH, Score=168, Expect=5e-56]} {RNA1509_7856} {RNA1310_39462} {RNA815_24967.1}
3.	MligTC455_50524	2187	45.56	Mlig455_033433	Neo: - Age: -		1.831	-	-	-	0.963	-	0.868	Mlig455_033433 {REF} {Length: 2629} {TRANSSPLICED} {RNA1509_42290} {RNA1310_15125} {RNA815_19799}
4.	MligTC455_20552	4501	93.77	Mlig455_013989	Neo: - Age: logFC(26M/2M)=-0.302	C9orf116	1.806	-	-	0.825	0.981	-	-	Mlig455_013989 {REF} {Length: 629} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4490) [PF14892.8, score=114.3]} {Human: ENSG00000160345, C9orf116, chromosome 9 open reading frame 116, [RH, Score=84.3, Expect=9e-22]} {Mouse: ENSMUSG00000026831, 1700007K13Rik, RIKEN cDNA 1700007K13 gene, [RH, Score=82.0, Expect=1e-20]} {Dmel: FBgn0083943, CG34107, [RH, Score=67.8, Expect=7e-16]} {Smed: dd_Smed_v6_1303_0_1, dd_Smed_v6_1303_0_1, [RH, Score=67.0, Expect=3e-16]} {RNA1509_14245, RNA1509_14678, RNA1509_3378} {RNA1310_56163, RNA1509_14245, RNA1509_14678, RNA1509_3378} {RNA1509_14245, RNA1509_14678, RNA1509_3378, RNA815_28697}
5.	MligTC455_43509	1526	31.78	Mlig455_024779, Mlig455_066104, Mlig455_068669	Neo: - Age: Down-Up-Up	ACSL1	1.806	-	-	0.958	0.848	-	-	Mlig455_024779 {REF} {Length: 2596} {Pfam: AMP-binding enzyme [PF00501.30, score=343.5]; AMP-binding enzyme C-terminal domain [PF13193.8, score=23.4]} {Human: ENSG00000151726, ACSL1, acyl-CoA synthetase long chain family member 1, [Score=534, Expect=0.0]; ENSG00000164398, ACSL6, acyl-CoA synthetase long chain family member 6, [Score=518, Expect=1e-175]; ENSG00000197142, ACSL5, acyl-CoA synthetase long chain family member 5, [Score=514, Expect=2e-174]} {Mouse: ENSMUSG00000018796, Acsl1, acyl-CoA synthetase long-chain family member 1, [Score=515, Expect=9e-175]; ENSMUSG00000024981, Acsl5, acyl-CoA synthetase long-chain family member 5, [Score=513, Expect=6e-174]; ENSMUSG00000020333, Acsl6, acyl-CoA synthetase long-chain family member 6, [Score=509, Expect=3e-172]} {Dmel: FBgn0036821, CG3961, [RH, Score=552, Expect=0.0]} {Celegans: WBGene00013575, acs-5, Fatty Acid CoA Synthetase family, [Score=476, Expect=4e-160]} {Smed: dd_Smed_v6_2009_0_2, dd_Smed_v6_2009_0_2, [Score=427, Expect=5e-141]} {RNA1509_51374} {RNA1310_7356.1} {RNA815_5550.1} Mlig455_066104 {REF} {Length: 2816} {Pfam: AMP-binding enzyme [PF00501.30, score=343.8]; AMP-binding enzyme C-terminal domain [PF13193.8, score=23.5]} {Human: ENSG00000151726, ACSL1, acyl-CoA synthetase long chain family member 1, [Score=531, Expect=1e-180]; ENSG00000197142, ACSL5, acyl-CoA synthetase long chain family member 5, [Score=516, Expect=3e-175]; ENSG00000164398, ACSL6, acyl-CoA synthetase long chain family member 6, [Score=513, Expect=1e-173]} {Mouse: ENSMUSG00000018796, Acsl1, acyl-CoA synthetase long-chain family member 1, [Score=512, Expect=2e-173]; ENSMUSG00000024981, Acsl5, acyl-CoA synthetase long-chain family member 5, [Score=511, Expect=4e-173]; ENSMUSG00000020333, Acsl6, acyl-CoA synthetase long-chain family member 6, [Score=506, Expect=5e-171]} {Dmel: FBgn0036821, CG3961, [RH, Score=551, Expect=0.0]} {Celegans: WBGene00013575, acs-5, Fatty Acid CoA Synthetase family, [Score=476, Expect=6e-160]} {Smed: dd_Smed_v6_2009_0_2, dd_Smed_v6_2009_0_2, [Score=424, Expect=7e-140]} {RNA1509_21029, RNA1509_51374} {RNA1310_7356.1, RNA1509_21029, RNA1509_51374} {RNA1509_21029, RNA1509_51374, RNA815_5550.1} Mlig455_068669 {REF} {Length: 2627} {Pfam: AMP-binding enzyme [PF00501.30, score=343.5]; AMP-binding enzyme C-terminal domain [PF13193.8, score=23.4]} {Human: ENSG00000151726, ACSL1, acyl-CoA synthetase long chain family member 1, [Score=534, Expect=0.0]; ENSG00000164398, ACSL6, acyl-CoA synthetase long chain family member 6, [Score=518, Expect=1e-175]; ENSG00000197142, ACSL5, acyl-CoA synthetase long chain family member 5, [Score=514, Expect=2e-174]} {Mouse: ENSMUSG00000018796, Acsl1, acyl-CoA synthetase long-chain family member 1, [Score=515, Expect=9e-175]; ENSMUSG00000024981, Acsl5, acyl-CoA synthetase long-chain family member 5, [Score=513, Expect=6e-174]; ENSMUSG00000020333, Acsl6, acyl-CoA synthetase long-chain family member 6, [Score=509, Expect=3e-172]} {Dmel: FBgn0036821, CG3961, [RH, Score=552, Expect=0.0]} {Celegans: WBGene00013575, acs-5, Fatty Acid CoA Synthetase family, [Score=476, Expect=4e-160]} {Smed: dd_Smed_v6_2009_0_2, dd_Smed_v6_2009_0_2, [Score=427, Expect=5e-141]} {RNA1509_51374} {RNA1310_7356.1} {RNA815_5550.1}
6.	MligTC455_44049	683	14.24	Mlig455_056686	Neo: - Age: logFC(26M/2M)=0.180 Region-enriched R4: 1.577/0.00572		1.781	-	-	-	0.972	-	0.809	Mlig455_056686 {REF} {Length: 2385} {Pfam: Multi-glycosylated core protein 24 (MGC-24), sialomucin [PF05283.13, score=33.2]} {Dmel: FBgn0045823, vsg, visgun, [Score=47.0, Expect=2e-06]} {Smed: dd_Smed_v6_828_0_1, dd_Smed_v6_828_0_1, [Score=49.7, Expect=8e-09]} {RNA1509_14879, RNA1509_9381} {RNA1310_34958.1, RNA1509_9381} {RNA1509_9381, RNA815_6770.2}
7.	MligTC455_23615	1709	35.6	Mlig455_005653	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.262	C5orf49	0.967	-	-	-	0.967	-	-	Mlig455_005653 {REF} {Length: 827} {Pfam: Domain of unknown function (DUF4541) [PF15074.8, score=117.9]} {Human: ENSG00000215217, C5orf49, chromosome 5 open reading frame 49, [RH, Score=97.4, Expect=4e-26]} {Mouse: ENSMUSG00000021534, 1700001L19Rik, RIKEN cDNA 1700001L19 gene, [RH, Score=103, Expect=3e-28]} {Smed: dd_Smed_v6_6211_0_1, dd_Smed_v6_6211_0_1, [RH, Score=137, Expect=2e-42]} {RNA1509_17241, RNA1509_42216} {RNA1310_45402, RNA1509_17241, RNA1509_42216} {RNA1509_17241, RNA1509_42216, RNA815_23943.1}
8.	MligTC455_17049	6274	130.71	Mlig455_029792, Mlig455_029942	Neo: - Age: logFC(26M/2M)=-0.392	EFCAB2	0.964	-	-	-	0.964	-	-	Mlig455_029792 {REF} {Length: 935} {Pfam: EF-hand domain pair [PF13499.8, score=44.0]; EF-hand domain [PF13405.8, score=39.7]; EF hand [PF00036.34, score=28.8]; EF-hand domain [PF14658.8, score=24.5]} {Human: ENSG00000203666, EFCAB2, EF-hand calcium binding domain 2, [RH, Score=204, Expect=8e-67]} {Mouse: ENSMUSG00000026495, Efcab2, EF-hand calcium binding domain 2, [RH, Score=209, Expect=9e-70]} {Dmel: FBgn0034481, CG11041, [RH, Score=139, Expect=1e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.0, Expect=3e-20]} {Smed: dd_Smed_v6_11976_0_1, dd_Smed_v6_11976_0_1, [RH, Score=192, Expect=1e-63]} {RNA1509_6027, RNA1509_9780} {RNA1310_41624, RNA1509_6027, RNA1509_9780} {RNA1509_6027, RNA1509_9780, RNA815_18008} Mlig455_029942 {REF} {Length: 933} {Pfam: EF-hand domain pair [PF13499.8, score=44.0]; EF-hand domain [PF13405.8, score=39.7]; EF hand [PF00036.34, score=28.8]; EF-hand domain [PF14658.8, score=24.5]} {Human: ENSG00000203666, EFCAB2, EF-hand calcium binding domain 2, [RH, Score=204, Expect=8e-67]} {Mouse: ENSMUSG00000026495, Efcab2, EF-hand calcium binding domain 2, [RH, Score=209, Expect=9e-70]} {Dmel: FBgn0034481, CG11041, [RH, Score=139, Expect=1e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.0, Expect=3e-20]} {Smed: dd_Smed_v6_11976_0_1, dd_Smed_v6_11976_0_1, [RH, Score=192, Expect=1e-63]} {RNA1509_6027} {RNA1310_41624} {RNA815_18008}
9.	MligTC455_26192	601	12.53	Mlig455_024017	Neo: - Age: Up-Down-Down Region-enriched R4: 1.726/0.00705	PEF1	0.952	-	-	-	0.952	-	-	Mlig455_024017 {REF} {Length: 2220} {Pfam: EF-hand domain [PF13405.8, score=57.8]; EF hand [PF00036.34, score=54.8]; EF-hand domain pair [PF13499.8, score=52.9]; EF hand [PF13202.8, score=43.0]; EF-hand domain pair [PF13833.8, score=35.1]} {Human: ENSG00000162517, PEF1, penta-EF-hand domain containing 1, [Score=93.6, Expect=6e-22]} {Mouse: ENSMUSG00000028779, Pef1, penta-EF hand domain containing 1, [Score=94.4, Expect=2e-22]} {Dmel: FBgn0033529, CG17765, [Score=97.8, Expect=1e-24]} {Celegans: WBGene00019770, M04F3.4, [Score=84.0, Expect=8e-20]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=96.7, Expect=1e-24]} {RNA1509_8928} {RNA1310_11493} {RNA815_7652.1}

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