Data search
Results for MligTC455_47317
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47317 | 313 | 6.53 | Mlig455_053249 | Neo: - Age: - |
Mlig455_053249 {REF} {Length: 432} {NoTransDecoderORF} |
Cumulative graph for MligTC455_47317
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.804 | 3.146 | 0.08280 | 0.62747 | |
| RegionR2 | -0.046 | 3.146 | 0.88736 | 1.00000 | |
| RegionR3 | 1.482 | 3.146 | 0.22145 | 0.76368 | |
| RegionR4 | 1.706 | 3.146 | 0.15361 | 0.40590 | |
| RegionR5 | 1.841 | 3.146 | 0.10218 | 0.30951 | |
| RegionR6 | 1.653 | 3.146 | 0.16950 | 0.72641 | |
| RegionR7 | 0.562 | 3.146 | 0.67478 | 1.00000 | |
| RegionR8 | -0.393 | 3.146 | 0.94895 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.444 | 3.146 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.784 | 3.146 | 0.05402 | 0.38302 | |
| RegenerationR3 | 1.336 | 3.146 | 0.17234 | 0.60771 | |
| RegenerationR4 | 1.511 | 3.146 | 0.13094 | 0.54693 | |
| RegenerationR5 | 1.869 | 3.146 | 0.04288 | 0.33929 | |
| RegenerationR6 | 1.482 | 3.146 | 0.11594 | 0.41930 | |
| RegenerationBL | 2.057 | 3.146 | 0.03357 | 0.20545 | |
| RegenerationTP | 2.098 | 3.146 | 0.07045 | 0.42575 |
Genes with expression patterns similar to MligTC455_47317
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47317 | 313 | 6.53 | Mlig455_053249 | Neo: - Age: - |
4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_053249 {REF} {Length: 432} {NoTransDecoderORF} | |
| 2. | MligTC455_37091 | 749 | 15.59 | Mlig455_048237 | Neo: - Age: - |
RNF34 | 1.833 | - | - | - | 0.869 | 0.964 | - | Mlig455_048237 {REF} {Length: 2742} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=37.7]; FYVE-type zinc finger [PF02318.18, score=19.2]} {Human: ENSG00000170633, RNF34, ring finger protein 34, [RH, Score=138, Expect=5e-38]; ENSG00000092871, RFFL, ring finger and FYVE like domain containing E3 ubiquitin protein ligase, [RH, Score=137, Expect=1e-35]; ENSG00000267618, RAD51L3-RFFL, RAD51L3-RFFL readthrough, [RH, Score=135, Expect=4e-36]} {Mouse: ENSMUSG00000029474, Rnf34, ring finger protein 34, [RH, Score=143, Expect=7e-38]; ENSMUSG00000020696, Rffl, ring finger and FYVE like domain containing protein, [RH, Score=141, Expect=2e-37]} {Dmel: FBgn0033783, CG17019, [RH, Score=134, Expect=2e-33]} {Celegans: WBGene00017342, F10D7.5, [RH, Score=62.0, Expect=3e-10]} {Smed: dd_Smed_v6_6206_0_1, dd_Smed_v6_6206_0_1, [Score=111, Expect=5e-27]} {RNA1509_16106} {RNA1310_5737.1, RNA1509_16106} {RNA1509_16106, RNA815_6542} |
| 3. | MligTC455_47020 | 573 | 11.94 | Mlig455_042870 | Neo: Irradiation Age: - Region-enriched R5: 1.835/0.00027 |
0.961 | - | - | - | - | 0.961 | - | Mlig455_042870 {REF} {Length: 2227} {TRANSSPLICED} {RNA1509_36308} {RNA1310_9308.1} {RNA815_15211.1} | |
| 4. | MligTC455_36948 | 315 | 6.56 | Mlig455_059931 | Neo: - Age: Up-Down-Down |
SLC49A3 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_059931 {REF} {Length: 2637} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=73.7]} {Human: ENSG00000169026, SLC49A3, solute carrier family 49 member 3, [RH, Score=263, Expect=5e-81]} {Mouse: ENSMUSG00000029490, Mfsd7a, major facilitator superfamily domain containing 7A, [RH, Score=249, Expect=3e-76]} {Dmel: FBgn0033196, CG1358, [Score=145, Expect=4e-38]} {Celegans: WBGene00015181, B0416.5, [RH, Score=234, Expect=6e-71]} {Smed: dd_Smed_v6_5238_0_1, dd_Smed_v6_5238_0_1, [RH, Score=283, Expect=2e-90]} {RNA1509_27866} {RNA1310_16250.1} {RNA815_4804} |
| 5. | MligTC455_34372 | 996 | 20.76 | Mlig455_050845 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_050845 {REF} {Length: 1663} {Smed: dd_Smed_v6_1890_0_1, dd_Smed_v6_1890_0_1, [RH, Score=128, Expect=1e-38]} {RNA1509_12511, RNA1509_24353, RNA1509_27386, RNA1509_52159} {RNA1310_45856.1, RNA1509_24353, RNA1509_27386, RNA1509_52159} {RNA1509_24353, RNA1509_27386, RNA1509_52159, RNA815_24927} | |
| 6. | MligTC455_47021 | 609 | 12.68 | Mlig455_042879 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.571 Region-enriched R5: 1.845/0.00023 |
NUP35 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_042879 {REF} {Length: 3231} {Pfam: Nup53/35/40-type RNA recognition motif [PF05172.15, score=62.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=39.2]} {Human: ENSG00000163002, NUP35, nucleoporin 35, [RH, Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026999, Nup35, nucleoporin 35, [RH, Score=115, Expect=1e-28]; ENSMUSG00000091900, Gm4353, predicted gene 4353, [RH, Score=115, Expect=1e-28]} {Dmel: FBgn0030943, CG6540, [RH, Score=76.3, Expect=5e-15]} {Celegans: WBGene00003805, npp-19, Nucleoporin NUP53, [RH, Score=62.4, Expect=2e-10]} {Smed: dd_Smed_v6_10329_0_1, dd_Smed_v6_10329_0_1, [RH, Score=75.9, Expect=4e-15]} {RNA1509_29514} {RNA1310_9308.1} {RNA815_19261} |
| 7. | MligTC455_44633 | 516 | 10.76 | Mlig455_064856 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.335/0.00031 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_064856 {REF} {Length: 750} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36868} {RNA1310_36940, RNA1509_36868} {RNA1509_36868, RNA815_23368} |
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