TomoSeq data search

Data search

Results for MligTC455_47337

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47337	86	1.78	Mlig455_012708	Neo: - Age: Up-Down-Up	DDX28	Mlig455_012708 {REF} {Length: 5413} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=71.1]; Helicase conserved C-terminal domain [PF00271.33, score=67.8]} {Human: ENSG00000182810, DDX28, DEAD-box helicase 28, [Score=139, Expect=4e-35]} {Mouse: ENSMUSG00000045538, Ddx28, DEAD (Asp-Glu-Ala-Asp) box polypeptide 28, [Score=156, Expect=5e-41]} {Dmel: FBgn0086130, Dbp21E2, DEAD box protein 21E2, [RH, Score=175, Expect=4e-48]} {Celegans: WBGene00002083, inf-1, Eukaryotic initiation factor 4A, [Score=123, Expect=1e-30]} {Smed: dd_Smed_v6_5591_0_1, dd_Smed_v6_5591_0_1, [RH, Score=223, Expect=9e-67]} {RNA1509_23861} {RNA1310_14777} {RNA815_21195}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47337

1.78

Mlig455_012708

Neo: -

Age: Up-Down-Up

DDX28

Mlig455_012708 {REF} {Length: 5413} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=71.1]; Helicase conserved C-terminal domain [PF00271.33, score=67.8]} {Human: ENSG00000182810, DDX28, DEAD-box helicase 28, [Score=139, Expect=4e-35]} {Mouse: ENSMUSG00000045538, Ddx28, DEAD (Asp-Glu-Ala-Asp) box polypeptide 28, [Score=156, Expect=5e-41]} {Dmel: FBgn0086130, Dbp21E2, DEAD box protein 21E2, [RH, Score=175, Expect=4e-48]} {Celegans: WBGene00002083, inf-1, Eukaryotic initiation factor 4A, [Score=123, Expect=1e-30]} {Smed: dd_Smed_v6_5591_0_1, dd_Smed_v6_5591_0_1, [RH, Score=223, Expect=9e-67]} {RNA1509_23861} {RNA1310_14777} {RNA815_21195}

Cumulative graph for MligTC455_47337

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	3.398	1.882	0.06763	0.58562
RegionR2	0.8	1.882	0.47710	0.86192
RegionR3	-0.512	1.882	0.94133	1.00000
RegionR4	1.236	1.882	0.28028	0.58777
RegionR5	0.504	1.882	0.50591	0.86884
RegionR6	0.01	1.882	0.80646	1.00000
RegionR7	-0.463	1.882	0.93818	1.00000
RegionR8	-4.973	1.882	0.12256	0.64295

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.559	1.882	0.44992	1.00000
RegenerationR2	1.697	1.882	0.02577	0.26495
RegenerationR3	0.845	1.882	0.40323	0.80484
RegenerationR4	0.047	1.882	0.94474	1.00000
RegenerationR5	0.443	1.882	0.51456	0.86681
RegenerationR6	1.632	1.882	0.07981	0.35283
RegenerationBL	3.655	1.882	0.04134	0.23135
RegenerationTP	-1.159	1.882	0.99956	1.00000

Genes with expression patterns similar to MligTC455_47337

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47337	86	1.78	Mlig455_012708	Neo: - Age: Up-Down-Up	DDX28	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_012708 {REF} {Length: 5413} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=71.1]; Helicase conserved C-terminal domain [PF00271.33, score=67.8]} {Human: ENSG00000182810, DDX28, DEAD-box helicase 28, [Score=139, Expect=4e-35]} {Mouse: ENSMUSG00000045538, Ddx28, DEAD (Asp-Glu-Ala-Asp) box polypeptide 28, [Score=156, Expect=5e-41]} {Dmel: FBgn0086130, Dbp21E2, DEAD box protein 21E2, [RH, Score=175, Expect=4e-48]} {Celegans: WBGene00002083, inf-1, Eukaryotic initiation factor 4A, [Score=123, Expect=1e-30]} {Smed: dd_Smed_v6_5591_0_1, dd_Smed_v6_5591_0_1, [RH, Score=223, Expect=9e-67]} {RNA1509_23861} {RNA1310_14777} {RNA815_21195}
2.	MligTC455_26784	19	0.39	Mlig455_008274	Neo: - Age: -		0.989	-	-	-	-	0.989	-	Mlig455_008274 {REF} {Length: 3895} {RNA1509_44400} {RNA1310_1509} {RNA815_21277}
3.	MligTC455_12476	88	1.84	Mlig455_044230	Neo: - Age: -		0.968	-	-	-	0.968	-	-	Mlig455_044230 {REF} {Length: 650} {NoTransDecoderORF} {RNA1509_52497} {RNA1310_61471} {RNA815_39165}
4.	MligTC455_25958	324	6.76	Mlig455_044638	Neo: Irradiation Age: logFC(26M/2M)=0.309 Region-enriched R5: 3.253/0.00000 Region-enriched R6: 1.852/0.04168	DLL1	0.957	-	-	-	0.957	-	-	Mlig455_044638 {REF} {Length: 5040} {Pfam: EGF-like domain [PF00008.29, score=84.4]; Delta serrate ligand [PF01414.21, score=66.3]; EGF-like domain [PF07974.15, score=59.7]; Human growth factor-like EGF [PF12661.9, score=50.7]; N terminus of Notch ligand [PF07657.15, score=35.2]; Laminin EGF domain [PF00053.26, score=20.9]} {Human: ENSG00000275555, DLL1, delta like canonical Notch ligand 1, [RH, Score=277, Expect=9e-82]; ENSG00000198719, DLL1, delta like canonical Notch ligand 1, [RH, Score=277, Expect=9e-82]} {Mouse: ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=271, Expect=6e-80]} {Dmel: FBgn0000463, Dl, dorsal, [RH, Score=264, Expect=2e-76]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=139, Expect=2e-33]} {Smed: dd_Smed_v6_13823_0_1, dd_Smed_v6_13823_0_1, [RH, Score=309, Expect=7e-92]} {RNA1509_17528} {RNA1310_7288, RNA1509_17528} {RNA1509_17528, RNA815_3267}