Data search
Results for MligTC455_47377
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47377 | 43 | 0.90 | Mlig455_055502 | Neo: Int S/G2/M Age: logFC(26M/2M)=1.278 |
WDR82 | Mlig455_055502 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=78.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=47.6]} {Human: ENSG00000164091, WDR82, WD repeat domain 82, [RH, Score=447, Expect=3e-158]} {Mouse: ENSMUSG00000020257, Wdr82, WD repeat domain containing 82, [RH, Score=447, Expect=2e-158]} {Dmel: FBgn0032030, Wdr82, WD repeat domain 82, [RH, Score=444, Expect=2e-157]} {Celegans: WBGene00016374, swd-2.2, Set1 WD40 repeat protein homolog, [RH, Score=276, Expect=2e-91]} {Smed: dd_Smed_v6_4830_0_1, dd_Smed_v6_4830_0_1, [RH, Score=360, Expect=2e-124]} {RNA1509_15991} {RNA1310_21239.1} {RNA815_12038.1} |
Cumulative graph for MligTC455_47377
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.237 | 1.496 | 0.46169 | 1.00000 | |
| RegionR2 | 1.555 | 1.496 | 0.29101 | 0.67950 | |
| RegionR3 | 1.095 | 1.496 | 0.33202 | 0.86981 | |
| RegionR4 | 0.754 | 1.496 | 0.56818 | 0.88670 | |
| RegionR5 | 0.799 | 1.496 | 0.46627 | 0.82842 | |
| RegionR6 | -0.041 | 1.496 | 0.88975 | 1.00000 | |
| RegionR7 | -0.04 | 1.496 | 0.89121 | 1.00000 | |
| RegionR8 | 0.117 | 1.496 | 0.86534 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.959 | 1.496 | 0.99984 | 1.00000 | |
| RegenerationR2 | -1.808 | 1.496 | 0.12856 | 0.55307 | |
| RegenerationR3 | -1.166 | 1.496 | 0.27176 | 0.70581 | |
| RegenerationR4 | 0.158 | 1.496 | 0.88808 | 1.00000 | |
| RegenerationR5 | -0.17 | 1.496 | 0.86907 | 1.00000 | |
| RegenerationR6 | 0.886 | 1.496 | 0.45527 | 0.77449 | |
| RegenerationBL | -2.239 | 1.496 | 0.40342 | 0.77265 | |
| RegenerationTP | -2.823 | 1.496 | 0.27845 | 0.72600 |
Genes with expression patterns similar to MligTC455_47377
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47377 | 43 | 0.9 | Mlig455_055502 | Neo: Int S/G2/M Age: logFC(26M/2M)=1.278 |
WDR82 | 4 | 1.000 | 1.000 | - | - | 1.000 | 1.000 | Mlig455_055502 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=78.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=47.6]} {Human: ENSG00000164091, WDR82, WD repeat domain 82, [RH, Score=447, Expect=3e-158]} {Mouse: ENSMUSG00000020257, Wdr82, WD repeat domain containing 82, [RH, Score=447, Expect=2e-158]} {Dmel: FBgn0032030, Wdr82, WD repeat domain 82, [RH, Score=444, Expect=2e-157]} {Celegans: WBGene00016374, swd-2.2, Set1 WD40 repeat protein homolog, [RH, Score=276, Expect=2e-91]} {Smed: dd_Smed_v6_4830_0_1, dd_Smed_v6_4830_0_1, [RH, Score=360, Expect=2e-124]} {RNA1509_15991} {RNA1310_21239.1} {RNA815_12038.1} |
| 2. | MligTC455_28766 | 46 | 0.95 | Mlig455_041904 | Neo: - Age: - Region-enriched R6: 3.641/0.01524 |
PTRHD1 | 0.979 | - | - | - | - | - | 0.979 | Mlig455_041904 {REF} {Length: 2121} {TRANSSPLICED} {Pfam: Peptidyl-tRNA hydrolase PTH2 [PF01981.18, score=84.9]} {Human: ENSG00000184924, PTRHD1, peptidyl-tRNA hydrolase domain containing 1, [RH, Score=103, Expect=3e-29]} {Mouse: ENSMUSG00000096199, Ptrhd1, peptidyl-tRNA hydrolase domain containing 1, [RH, Score=107, Expect=6e-31]} {Dmel: FBgn0038446, CG14903, [RH, Score=140, Expect=2e-44]} {Celegans: WBGene00050885, Y94H6A.12, [RH, Score=122, Expect=5e-37]} {Smed: dd_Smed_v6_6409_0_1, dd_Smed_v6_6409_0_1, [RH, Score=127, Expect=4e-39]} {RNA1509_51707} {RNA1310_42234} {RNA815_30800} |
| 3. | MligTC455_12671 | 38 | 0.79 | Mlig455_038144, Mlig455_039808 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_038144 {REF} {Length: 650} {RNA1310_68328} {RNA815_32749} Mlig455_039808 {REF} {Length: 815} {RNA1310_68328} {RNA815_32749} |
|
| 4. | MligTC455_09248 | 13 | 0.27 | Mlig455_000925 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_000925 {REF} {Length: 1406} {RNA1509_56557} {RNA1310_11302} {RNA815_40759} | |
| 5. | MligTC455_08844 | 13 | 0.28 | Mlig455_001398 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_001398 {REF} {Length: 798} {NoTransDecoderORF} {RNA1509_1271} {RNA1310_135792} {RNA815_7914.1} | |
| 6. | MligTC455_12348 | 13 | 0.27 | Mlig455_070964 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_070964 {REF} {Length: 760} {RNA1310_49858.1} | |
| 7. | MligTC455_53948 | 92 | 1.92 | Mlig455_055351 | Neo: - Age: - Region-enriched R2: 4.539/0.03166 |
0.959 | - | - | - | - | 0.959 | - | Mlig455_055351 {REF} {Length: 898} {RNA1509_25473} {RNA1310_87504} | |
| 8. | MligTC455_52665 | 33 | 0.68 | Mlig455_040206 | Neo: - Age: Down-Up-Down |
0.954 | - | - | - | - | 0.954 | - | Mlig455_040206 {REF} {Length: 2666} {Pfam: Family of unknown function (DUF5731) [PF19002.2, score=141.4]} {RNA1509_54737} {RNA1310_23581.1, RNA1509_54737} {RNA1509_54737, RNA815_50984} |
Berezikov Lab - 2020-2021 © ERIBA