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Results for MligTC455_47417

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47417 12 0.24 Mlig455_010975, Mlig455_015444, Mlig455_056982, Mlig455_069733

Neo: -

Age: Down-Up-Down

 RTL1

Mlig455_010975 {REF} {Length: 830} {Pfam: Integrase core domain [PF00665.28, score=44.9]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=58.5, Expect=2e-11]} {RNA1509_49419} {RNA1310_1940.1} {RNA815_1595}

Mlig455_015444 {REF} {Length: 5668} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.5]; Integrase zinc binding domain [PF17921.3, score=64.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=63.8]; Integrase core domain [PF00665.28, score=43.9]; Zinc knuckle [PF00098.25, score=21.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.2, Expect=2e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=294, Expect=6e-83]} {RNA1509_33291} {RNA1310_923.1, RNA1509_33291} {RNA1509_33291, RNA815_1595}

Mlig455_056982 {REF} {Length: 650} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.5]; Integrase zinc binding domain [PF17921.3, score=62.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.3]; Integrase core domain [PF00665.28, score=43.8]; Zinc knuckle [PF00098.25, score=21.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=91.7, Expect=6e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.9, Expect=1e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=291, Expect=3e-82]} {RNA1509_49419} {RNA1310_1940.1} {RNA815_1595}

Mlig455_069733 {REF} {Length: 1166} {Pfam: Integrase core domain [PF00665.28, score=45.8]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=58.5, Expect=4e-11]} {RNA1509_49419} {RNA1310_1940.1} {RNA815_1595}

Cumulative graph for MligTC455_47417

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_47417

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47417 12 0.24 Mlig455_010975, Mlig455_015444, Mlig455_056982, Mlig455_069733

Neo: -

Age: Down-Up-Down

 RTL1 1 - - - 1.000 - -

Mlig455_010975 {REF} {Length: 830} {Pfam: Integrase core domain [PF00665.28, score=44.9]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=58.5, Expect=2e-11]} {RNA1509_49419} {RNA1310_1940.1} {RNA815_1595}

Mlig455_015444 {REF} {Length: 5668} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.5]; Integrase zinc binding domain [PF17921.3, score=64.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=63.8]; Integrase core domain [PF00665.28, score=43.9]; Zinc knuckle [PF00098.25, score=21.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.2, Expect=2e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=294, Expect=6e-83]} {RNA1509_33291} {RNA1310_923.1, RNA1509_33291} {RNA1509_33291, RNA815_1595}

Mlig455_056982 {REF} {Length: 650} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.5]; Integrase zinc binding domain [PF17921.3, score=62.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.3]; Integrase core domain [PF00665.28, score=43.8]; Zinc knuckle [PF00098.25, score=21.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=91.7, Expect=6e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.9, Expect=1e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=291, Expect=3e-82]} {RNA1509_49419} {RNA1310_1940.1} {RNA815_1595}

Mlig455_069733 {REF} {Length: 1166} {Pfam: Integrase core domain [PF00665.28, score=45.8]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=58.5, Expect=4e-11]} {RNA1509_49419} {RNA1310_1940.1} {RNA815_1595}
2. MligTC455_36180 154 3.2 Mlig455_012591

Neo: -

Age: logFC(26M/2M)=0.694

 PLB1 0.991 - - - 0.991 - - Mlig455_012591 {REF} {Length: 3301} {Pfam: GDSL-like Lipase/Acylhydrolase [PF00657.24, score=78.5]; GDSL-like Lipase/Acylhydrolase family [PF13472.8, score=41.1]} {Human: ENSG00000163803, PLB1, phospholipase B1, [RH, Score=293, Expect=3e-88]} {Mouse: ENSMUSG00000029134, Plb1, phospholipase B1, [RH, Score=308, Expect=1e-93]} {Dmel: FBgn0036939, CG7365, [Score=235, Expect=5e-73]} {Celegans: WBGene00022256, Y73B6BL.37, [RH, Score=244, Expect=3e-77]} {Smed: dd_Smed_v6_2690_0_1, dd_Smed_v6_2690_0_1, [Score=232, Expect=4e-72]} {RNA1509_30374, RNA1509_7815} {RNA1310_16463, RNA1509_7815} {RNA1509_7815, RNA815_8760}
3. MligTC455_15744 10 0.2 Mlig455_004416, Mlig455_037236, Mlig455_037248

Neo: -

Age: logFC(26M/2M)=5.885

 0.978 - - - 0.978 - -

Mlig455_004416 {REF} {Length: 566} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=30.7]} {RNA1310_74857} {RNA815_44109}

Mlig455_037236 {REF} {Length: 597} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=30.7]} {RNA1310_74857} {RNA815_44109}

Mlig455_037248 {REF} {Length: 572} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=28.8]} {RNA1310_74857} {RNA815_44109}
4. MligTC455_25061 16 0.34 Mlig455_013138

Neo: -

Age: logFC(26M/2M)=-0.554

 RASEF 0.972 - - - 0.972 - - Mlig455_013138 {REF} {Length: 3781} {Pfam: Ras family [PF00071.24, score=110.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=56.0]; EF-hand domain pair [PF13499.8, score=42.2]; EF hand [PF00036.34, score=41.5]; ADP-ribosylation factor family [PF00025.23, score=40.5]; EF-hand domain [PF13405.8, score=39.5]; EF-hand domain pair [PF13833.8, score=33.0]; EF hand [PF13202.8, score=29.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.7]} {Human: ENSG00000165105, RASEF, RAS and EF-hand domain containing, [Score=149, Expect=2e-36]} {Mouse: ENSMUSG00000043003, Rasef, RAS and EF hand domain containing, [Score=142, Expect=3e-35]} {Dmel: FBgn0285937, Rab1, [Score=93.2, Expect=2e-21]} {Celegans: WBGene00007067, 4R79.2, Rab-44, [Score=119, Expect=2e-29]} {Smed: dd_Smed_v6_4284_0_1, dd_Smed_v6_4284_0_1, [Score=171, Expect=4e-44]} {RNA1509_21698} {RNA1310_2939.1} {RNA815_9067}
5. MligTC455_50369 972 20.25 Mlig455_061941

Neo: -

Age: -

Region-enriched R3: 4.136/0.00000
Region-enriched R4: 3.054/0.00529

 0.971 - - - 0.971 - - Mlig455_061941 {REF} {Length: 937} {RNA1509_39644} {RNA1310_71053} {RNA815_32028.2}
6. MligTC455_07359 32 0.66 Mlig455_041279

Neo: -

Age: -

Region-enriched R4: 3.058/0.03644

 0.969 - - - 0.969 - - Mlig455_041279 {REF} {Length: 909} {RNA1509_38784} {RNA1310_36022, RNA1509_38784} {RNA1509_38784, RNA815_21397}
7. MligTC455_53287 6775 141.16 Mlig455_026427, Mlig455_026458, Mlig455_044750

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=2.125

Region-enriched R3: 3.677/0.00000

 0.969 - - - 0.969 - -

Mlig455_026427 {REF} {Length: 1166} {RNA1509_15587} {RNA1310_35864} {RNA815_17135}

Mlig455_026458 {REF} {Length: 978} {RNA1509_1133, RNA1509_15587} {RNA1310_35864, RNA1509_1133, RNA1509_15587} {RNA1509_1133, RNA1509_15587, RNA815_17135}

Mlig455_044750 {REF} {Length: 1007} {RNA1509_1133} {RNA1310_35864} {RNA815_17135}
8. MligTC455_22527 180 3.75 Mlig455_016486

Neo: -

Age: logFC(26M/2M)=3.591

Region-enriched R3: 4.421/0.00282

 0.968 - - - 0.968 - - Mlig455_016486 {REF} {Length: 1533} {TRANSSPLICED} {Pfam: Haemolymph juvenile hormone binding protein (JHBP) [PF06585.13, score=150.8]} {Dmel: FBgn0038395, CG10407, [RH, Score=86.7, Expect=5e-19]} {Smed: dd_Smed_v6_888_0_1, dd_Smed_v6_888_0_1, [Score=90.1, Expect=2e-20]} {RNA1509_13349} {RNA1310_21535.1} {RNA815_6279.1}
9. MligTC455_16627 108 2.24 Mlig455_059126

Neo: -

Age: Up-Down-Up

Region-enriched R3: 4.426/0.00046

 0.966 - - - 0.966 - - Mlig455_059126 {REF} {Length: 1776} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=41.0]; Male sterility protein [PF07993.14, score=36.0]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=32.2]; RmlD substrate binding domain [PF04321.19, score=23.2]; GDP-mannose 4,6 dehydratase [PF16363.7, score=20.2]} {Smed: dd_Smed_v6_12075_0_1, dd_Smed_v6_12075_0_1, [Score=55.5, Expect=1e-08]} {RNA1509_43778, RNA1509_44711} {RNA1310_30985, RNA1509_43778} {RNA1509_43778, RNA815_13916}
10. MligTC455_41072 794 16.55 Mlig455_050940

Neo: -

Age: logFC(26M/2M)=1.072

Region-specific R3: 4.616

Region-enriched R3: 4.925/0.00000

 0.96 - - - 0.960 - - Mlig455_050940 {REF} {Length: 769} {RNA1509_10741, RNA1509_26937} {RNA1310_44283.1, RNA1509_10741, RNA1509_26937} {RNA1509_10741, RNA1509_26937, RNA815_21735}
11. MligTC455_19025 86 1.79 Mlig455_037631

Neo: Int S/G2/M

Age: Up-Down-Down

 0.958 - - - 0.958 - - Mlig455_037631 {REF} {Length: 2219} {RNA1509_32306} {RNA1310_31823.1} {RNA815_14423}
12. MligTC455_06672 4 0.09 Mlig455_064788

Neo: -

Age: -

 0.957 - - - 0.957 - - Mlig455_064788 {REF} {Length: 608} {NoTransDecoderORF} {RNA1509_5902} {RNA1310_60443} {RNA815_3484.1}
13. MligTC455_46106 17 0.35 Mlig455_005750

Neo: -

Age: -

 NEUROD1 0.957 - - - 0.957 - - Mlig455_005750 {REF} {Length: 2658} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=57.3]} {Human: ENSG00000162992, NEUROD1, neuronal differentiation 1, [Score=63.9, Expect=1e-10]; ENSG00000123307, NEUROD4, neuronal differentiation 4, [Score=63.2, Expect=2e-10]; ENSG00000181965, NEUROG1, neurogenin 1, [Score=62.8, Expect=1e-10]; ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [Score=62.8, Expect=3e-11]; ENSG00000168267, PTF1A, pancreas associated transcription factor 1a, [Score=61.6, Expect=5e-10]; ENSG00000171532, NEUROD2, neuronal differentiation 2, [Score=61.2, Expect=9e-10]; ENSG00000260428, SCX, scleraxis bHLH transcription factor, [Score=60.8, Expect=3e-10]; ENSG00000125878, TCF15, transcription factor 15, [Score=60.8, Expect=3e-10]} {Mouse: ENSMUSG00000048015, Neurod4, neurogenic differentiation 4, [Score=65.1, Expect=3e-11]; ENSMUSG00000068079, Tcf15, transcription factor 15, [Score=64.7, Expect=1e-11]; ENSMUSG00000034701, Neurod1, neurogenic differentiation 1, [Score=63.9, Expect=8e-11]; ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [Score=63.5, Expect=1e-11]; ENSMUSG00000048904, Neurog1, neurogenin 1, [Score=62.8, Expect=8e-11]} {Dmel: FBgn0037475, Fer1, 48 related 1, [Score=70.9, Expect=1e-13]} {Celegans: WBGene00001954, hlh-10, Helix Loop Helix, [RH, Score=57.0, Expect=2e-09]} {Smed: dd_Smed_v6_6869_0_1, dd_Smed_v6_6869_0_1, [RH, Score=68.2, Expect=2e-13]} {RNA1310_27559} {RNA815_55155}
14. MligTC455_06788 28 0.59 Mlig455_003273, Mlig455_014182, Mlig455_037567, Mlig455_046981

Neo: -

Age: Down-Up-Down

Region-enriched R5: 5.138/0.00867

 0.956 - - - 0.956 - -

Mlig455_003273 {REF} {Length: 619} {RNA1509_23064} {RNA1310_9108} {RNA815_5569}

Mlig455_014182 {REF} {Length: 848} {RNA1509_23064} {RNA1310_9108} {RNA815_5569}

Mlig455_037567 {REF} {Length: 733} {RNA1509_23064} {RNA1310_9108} {RNA815_5569}

Mlig455_046981 {REF} {Length: 755} {RNA1509_23064} {RNA1310_9108} {RNA815_5569}
15. MligTC455_19585 83 1.72 Mlig455_041765

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.499

 PCDH11X 0.956 - - - 0.956 - - Mlig455_041765 {REF} {Length: 5069} {Pfam: Cadherin domain [PF00028.19, score=307.9]; Cadherin-like [PF08266.14, score=46.0]; Cadherin-like [PF16184.7, score=24.6]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=294, Expect=4e-84]; ENSG00000184226, PCDH9, protocadherin 9, [Score=293, Expect=4e-84]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=290, Expect=9e-83]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [RH, Score=301, Expect=7e-86]} {Dmel: FBgn0001075, ft, fat, [Score=242, Expect=9e-66]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=206, Expect=4e-54]} {Smed: dd_Smed_v6_15181_0_1, dd_Smed_v6_15181_0_1, [RH, Score=275, Expect=2e-78]} {RNA1509_46943} {RNA1310_9721, RNA1509_46943} {RNA1509_46943, RNA815_23754}
16. MligTC455_12900 29 0.6 Mlig455_027668

Neo: -

Age: -

 0.954 - - - 0.954 - - Mlig455_027668 {REF} {Length: 1792} {NoTransDecoderORF} {RNA1509_41695} {RNA1310_58090} {RNA815_19385}

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