Data search
Results for MligTC455_47423
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47423 | 378 | 7.87 | Mlig455_066691 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.683/0.04024 |
CPSF4 | Mlig455_066691 {REF} {Length: 1551} {TRANSSPLICED} {Pfam: Zinc finger domain [PF18345.3, score=62.5]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=57.3]; Torus domain [PF16131.7, score=34.2]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=29.9]; CCCH-type zinc finger [PF18044.3, score=29.7]; Zinc-finger containing family [PF15663.7, score=29.2]; Zinc knuckle [PF00098.25, score=20.7]} {Human: ENSG00000160917, CPSF4, cleavage and polyadenylation specific factor 4, [RH, Score=271, Expect=1e-88]} {Mouse: ENSMUSG00000029625, Cpsf4, cleavage and polyadenylation specific factor 4, [RH, Score=271, Expect=1e-88]} {Dmel: FBgn0015621, Clp, Clipper, [RH, Score=249, Expect=7e-80]} {Celegans: WBGene00044329, cpsf-4, Cleavage and Polyadenylation Specificity Factor, [RH, Score=235, Expect=2e-74]} {Smed: dd_Smed_v6_4069_0_1, dd_Smed_v6_4069_0_1, [RH, Score=259, Expect=4e-84]} {RNA1509_31717, RNA1509_35795} {RNA1310_19692.1, RNA1509_31717, RNA1509_35795} {RNA1509_31717, RNA1509_35795, RNA815_8519} |
Cumulative graph for MligTC455_47423
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.151 | 3.492 | 0.87055 | 1.00000 | |
| RegionR2 | 1.259 | 3.492 | 0.12959 | 0.44667 | |
| RegionR3 | 1.086 | 3.492 | 0.13410 | 0.62710 | |
| RegionR4 | 1.154 | 3.492 | 0.12358 | 0.35329 | |
| RegionR5 | 1.683 | 3.492 | 0.00609 | 0.04024 | |
| RegionR6 | 0.542 | 3.492 | 0.46167 | 1.00000 | |
| RegionR7 | 0.656 | 3.492 | 0.45291 | 1.00000 | |
| RegionR8 | -6.228 | 3.492 | 0.01628 | 0.24894 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.402 | 3.492 | 0.32079 | 1.00000 | |
| RegenerationR2 | 0.22 | 3.492 | 0.67359 | 0.94657 | |
| RegenerationR3 | 0.227 | 3.492 | 0.69699 | 0.94677 | |
| RegenerationR4 | 0.826 | 3.492 | 0.14873 | 0.57601 | |
| RegenerationR5 | 0.328 | 3.492 | 0.51646 | 0.86754 | |
| RegenerationR6 | 1.683 | 3.492 | 0.00484 | 0.08410 | |
| RegenerationBL | 3.335 | 3.492 | 0.00158 | 0.03102 | |
| RegenerationTP | 3.901 | 3.492 | 0.00784 | 0.14888 |
Genes with expression patterns similar to MligTC455_47423
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47423 | 378 | 7.87 | Mlig455_066691 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.683/0.04024 |
CPSF4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_066691 {REF} {Length: 1551} {TRANSSPLICED} {Pfam: Zinc finger domain [PF18345.3, score=62.5]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=57.3]; Torus domain [PF16131.7, score=34.2]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=29.9]; CCCH-type zinc finger [PF18044.3, score=29.7]; Zinc-finger containing family [PF15663.7, score=29.2]; Zinc knuckle [PF00098.25, score=20.7]} {Human: ENSG00000160917, CPSF4, cleavage and polyadenylation specific factor 4, [RH, Score=271, Expect=1e-88]} {Mouse: ENSMUSG00000029625, Cpsf4, cleavage and polyadenylation specific factor 4, [RH, Score=271, Expect=1e-88]} {Dmel: FBgn0015621, Clp, Clipper, [RH, Score=249, Expect=7e-80]} {Celegans: WBGene00044329, cpsf-4, Cleavage and Polyadenylation Specificity Factor, [RH, Score=235, Expect=2e-74]} {Smed: dd_Smed_v6_4069_0_1, dd_Smed_v6_4069_0_1, [RH, Score=259, Expect=4e-84]} {RNA1509_31717, RNA1509_35795} {RNA1310_19692.1, RNA1509_31717, RNA1509_35795} {RNA1509_31717, RNA1509_35795, RNA815_8519} |
| 2. | MligTC455_25576 | 466 | 9.71 | Mlig455_024668 | Neo: - Age: Down-Up-Up |
ADCK1 | 1.684 | 0.719 | - | - | 0.965 | - | - | Mlig455_024668 {REF} {Length: 1971} {TRANSSPLICED} {Pfam: ABC1 atypical kinase-like domain [PF03109.18, score=252.7]; Protein kinase domain [PF00069.27, score=18.3]} {Human: ENSG00000063761, ADCK1, aarF domain containing kinase 1, [RH, Score=425, Expect=4e-144]} {Mouse: ENSMUSG00000021044, Adck1, aarF domain containing kinase 1, [RH, Score=419, Expect=5e-142]} {Dmel: FBgn0035039, Adck, aarF domain containing kinase, [RH, Score=387, Expect=8e-130]} {Celegans: WBGene00008410, D2023.6, [RH, Score=367, Expect=8e-122]} {Smed: dd_Smed_v6_14585_0_1, dd_Smed_v6_14585_0_1, [RH, Score=354, Expect=1e-116]} {RNA1509_42731} {RNA1310_8701, RNA1509_42731} {RNA1509_42731, RNA815_13502} |
| 3. | MligTC455_25577 | 442 | 9.2 | Mlig455_044046 | Neo: - Age: - |
EDC4 | 1.67 | 0.714 | - | - | 0.956 | - | - | Mlig455_044046 {REF} {Length: 7057} {TRANSSPLICED} {Pfam: WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=243.1]; TMEM192 family [PF14802.8, score=42.2]} {Human: ENSG00000038358, EDC4, enhancer of mRNA decapping 4, [RH, Score=190, Expect=5e-48]} {Mouse: ENSMUSG00000036270, Edc4, enhancer of mRNA decapping 4, [RH, Score=186, Expect=4e-47]} {Dmel: FBgn0283682, Ge-1, [RH, Score=159, Expect=6e-39]} {Smed: dd_Smed_v6_2416_0_1, dd_Smed_v6_2416_0_1, [RH, Score=226, Expect=4e-60]} {RNA1509_47327, RNA1509_5030} {RNA1310_1379.1, RNA1509_47327} {RNA1509_47327, RNA815_8608} |
| 4. | MligTC455_47338 | 217 | 4.52 | Mlig455_012709 | Neo: - Age: - |
PPIL4 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_012709 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=128.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=54.6]} {Human: ENSG00000131013, PPIL4, peptidylprolyl isomerase like 4, [RH, Score=437, Expect=2e-148]} {Mouse: ENSMUSG00000015757, Ppil4, peptidylprolyl isomerase (cyclophilin)-like 4, [RH, Score=436, Expect=4e-148]} {Dmel: FBgn0027617, CG5808, [RH, Score=445, Expect=1e-149]} {Celegans: WBGene00000890, sig-7, Peptidyl-prolyl cis-trans isomerase sig-7, [RH, Score=430, Expect=7e-147]} {Smed: dd_Smed_v6_5960_0_1, dd_Smed_v6_5960_0_1, [RH, Score=475, Expect=6e-164]} {RNA1509_24280} {RNA1310_15714} {RNA815_14242} |
| 5. | MligTC455_45187 | 834 | 17.38 | Mlig455_001897 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.983/0.00039 |
0.955 | - | 0.955 | - | - | - | - | Mlig455_001897 {REF} {Length: 1457} {TRANSSPLICED} {Pfam: Transcription factor Iwr1 [PF08574.12, score=26.3]} {RNA1509_8703} {RNA1310_22160} {RNA815_9328} | |
| 6. | MligTC455_38426 | 258 | 5.37 | Mlig455_010852, Mlig455_010883 | Neo: - Age: Up-Down-Down |
0.954 | - | - | - | 0.954 | - | - | Mlig455_010852 {REF} {Length: 2558} {tRNA: His(GTG), score=60.8} {RNA1509_34614} {RNA1310_44996, RNA1509_34614} {RNA1509_34614, RNA815_60524} Mlig455_010883 {REF} {Length: 183} {NoTransDecoderORF} {tRNA: His(GTG), score=60.8} {RNA1509_11551} |
|
| 7. | MligTC455_38425 | 255 | 5.31 | Mlig455_010880 | Neo: - Age: - |
THADA | 0.95 | - | - | - | 0.950 | - | - | Mlig455_010880 {REF} {Length: 6504} {TRANSSPLICED} {Pfam: Putative death-receptor fusion protein (DUF2428) [PF10350.11, score=184.7]} {Human: ENSG00000115970, THADA, THADA, armadillo repeat containing, [Score=230, Expect=6e-60]} {Mouse: ENSMUSG00000024251, Thada, thyroid adenoma associated, [Score=221, Expect=2e-57]} {Dmel: FBgn0031077, THADA, [RH, Score=152, Expect=1e-36]} {Celegans: WBGene00022361, Y92H12A.5, [RH, Score=137, Expect=5e-32]} {Smed: dd_Smed_v6_12325_0_1, dd_Smed_v6_12325_0_1, [Score=184, Expect=1e-46]} {RNA1509_25979, RNA1509_55847} {RNA1310_2458.1, RNA1509_25979, RNA1509_55847} {RNA1509_25979, RNA1509_55847, RNA815_9736} |
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