Data search


search
Exact
Search

Results for MligTC455_47425

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47425 984 20.50 Mlig455_001049

Neo: -

Age: -

Mlig455_001049 {REF} {Length: 1574} {TRANSSPLICED} {RNA1509_10022} {RNA1310_19868.1, RNA1509_10022} {RNA1509_10022, RNA815_8411}

Cumulative graph for MligTC455_47425

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.034 4.555 0.96951 1.00000
RegionR2 0.031 4.555 0.93545 1.00000
RegionR3 0.334 4.555 0.28747 0.82990
RegionR4 0.595 4.555 0.12285 0.35205
RegionR5 -0.089 4.555 0.77519 1.00000
RegionR6 0.146 4.555 0.65687 1.00000
RegionR7 -0.491 4.555 0.28919 0.92262
RegionR8 -0.49 4.555 0.40061 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.489 4.555 0.65489 1.00000
RegenerationR2 0.333 4.555 0.29782 0.73983
RegenerationR3 -0.028 4.555 0.93530 1.00000
RegenerationR4 -0.017 4.555 0.96302 1.00000
RegenerationR5 0.241 4.555 0.48012 0.84669
RegenerationR6 -0.697 4.555 0.06962 0.33050
RegenerationBL -0.103 4.555 0.82843 1.00000
RegenerationTP 0.138 4.555 0.78723 1.00000


Genes with expression patterns similar to MligTC455_47425

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47425 984 20.5 Mlig455_001049

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_001049 {REF} {Length: 1574} {TRANSSPLICED} {RNA1509_10022} {RNA1310_19868.1, RNA1509_10022} {RNA1509_10022, RNA815_8411}
2. MligTC455_37020 1054 21.96 Mlig455_043497

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.666

Region-enriched R5: 1.199/0.01021

CYP2J2 0.97 - - - - 0.970 - Mlig455_043497 {REF} {Length: 2183} {Pfam: Cytochrome P450 [PF00067.24, score=322.9]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=244, Expect=4e-74]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=236, Expect=4e-71]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=236, Expect=5e-71]; ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=236, Expect=7e-71]; ENSG00000186104, CYP2R1, cytochrome P450 family 2 subfamily R member 1, [Score=232, Expect=1e-69]} {Mouse: ENSMUSG00000052974, Cyp2f2, cytochrome P450, family 2, subfamily f, polypeptide 2, [RH, Score=251, Expect=2e-77]; ENSMUSG00000096852, Cyp2d12, cytochrome P450, family 2, subfamily d, polypeptide 12, [RH, Score=245, Expect=9e-75]; ENSMUSG00000030670, Cyp2r1, cytochrome P450, family 2, subfamily r, polypeptide 1, [RH, Score=242, Expect=1e-73]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [RH, Score=254, Expect=5e-78]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=225, Expect=2e-67]} {Smed: dd_Smed_v6_2351_0_1, dd_Smed_v6_2351_0_1, [RH, Score=280, Expect=2e-88]} {RNA1509_48428} {RNA1310_15448, RNA1509_48428} {RNA1509_48428, RNA815_13331}
3. MligTC455_44912 1037 21.61 Mlig455_049352

Neo: -

Age: -

CEP128 0.956 - - 0.956 - - - Mlig455_049352 {REF} {Length: 4305} {TRANSSPLICED} {Human: ENSG00000100629, CEP128, centrosomal protein 128, [RH, Score=61.2, Expect=9e-09]} {Mouse: ENSMUSG00000061533, Cep128, centrosomal protein 128, [RH, Score=77.0, Expect=8e-14]} {Smed: dd_Smed_v6_13724_0_1, dd_Smed_v6_13724_0_1, [Score=79.3, Expect=6e-15]} {RNA1509_5352} {RNA1310_1859.1} {RNA815_7467.1}
4. MligTC455_39569 194 4.05 Mlig455_006055, Mlig455_028715

Neo: Int S/G2/M

Age: -

ZAN 0.954 - - - 0.954 - -

Mlig455_006055 {REF} {Length: 1262} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=61.5]} {RNA1310_85984}

Mlig455_028715 {REF} {Length: 4529} {Pfam: SH2 domain [PF00017.26, score=22.0]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=60.1, Expect=2e-08]} {RNA1509_15981} {RNA1310_15741} {RNA815_13643}
5. MligTC455_34933 692 14.41 Mlig455_052749

Neo: -

Age: -

0.953 - - 0.953 - - - Mlig455_052749 {REF} {Length: 5737} {TRANSSPLICED} {RNA1509_5485} {RNA1310_1007.1, RNA1509_5485} {RNA1509_5485, RNA815_1873.1}
6. MligTC455_15405 771 16.05 Mlig455_015125

Neo: -

Age: -

CTBP2 0.951 - - 0.951 - - - Mlig455_015125 {REF} {Length: 3617} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=185.9]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=91.0]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=22.7]} {Human: ENSG00000175029, CTBP2, C-terminal binding protein 2, [RH, Score=507, Expect=5e-170]; ENSG00000159692, CTBP1, C-terminal binding protein 1, [RH, Score=498, Expect=5e-174]} {Mouse: ENSMUSG00000030970, Ctbp2, C-terminal binding protein 2, [RH, Score=507, Expect=6e-170]; ENSMUSG00000037373, Ctbp1, C-terminal binding protein 1, [RH, Score=502, Expect=2e-175]} {Dmel: FBgn0020496, CtBP, C-terminal Binding Protein, [RH, Score=547, Expect=0.0]} {Celegans: WBGene00006424, ctbp-1, C-terminal-binding protein 1, [RH, Score=391, Expect=9e-130]} {Smed: dd_Smed_v6_1063_0_1, dd_Smed_v6_1063_0_1, [RH, Score=536, Expect=0.0]} {RNA1509_41815} {RNA1310_15804.1, RNA1509_41815} {RNA1509_41815, RNA815_10755}
7. MligTC455_15404 774 16.13 Mlig455_015252

Neo: Irradiation

Age: -

WBP2NL 0.95 - - 0.950 - - - Mlig455_015252 {REF} {Length: 1820} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [Score=50.1, Expect=5e-07]} {RNA1509_35087, RNA1509_43246, RNA1509_49119} {RNA1310_35993, RNA1509_35087, RNA1509_43246, RNA1509_49119} {RNA1509_35087, RNA1509_43246, RNA1509_49119, RNA815_16196.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA