Data search
Results for MligTC455_47505
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47505 | 550 | 11.45 | Mlig455_018902 | Neo: - Age: - |
CCM2 | Mlig455_018902 {REF} {Length: 3270} {TRANSSPLICED} {Pfam: Cerebral cavernous malformation protein, harmonin-homology [PF16545.7, score=42.4]} {Human: ENSG00000136280, CCM2, CCM2 scaffold protein, [RH, Score=121, Expect=2e-29]} {Mouse: ENSMUSG00000000378, Ccm2, cerebral cavernous malformation 2, [RH, Score=125, Expect=4e-31]} {Smed: dd_Smed_v6_9706_0_1, dd_Smed_v6_9706_0_1, [RH, Score=97.1, Expect=8e-22]} {RNA1509_21291, RNA1509_53128, RNA1509_53195} {RNA1310_6986, RNA1509_21291, RNA1509_53128, RNA1509_53195} {RNA1509_21291, RNA1509_53128, RNA1509_53195, RNA815_16876} |
Cumulative graph for MligTC455_47505
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.048 | 3.866 | 0.96670 | 1.00000 | |
| RegionR2 | 0.119 | 3.866 | 0.82329 | 1.00000 | |
| RegionR3 | -0.356 | 3.866 | 0.40553 | 0.93253 | |
| RegionR4 | 0.221 | 3.866 | 0.66247 | 0.96154 | |
| RegionR5 | -0.059 | 3.866 | 0.87928 | 1.00000 | |
| RegionR6 | -0.341 | 3.866 | 0.44328 | 1.00000 | |
| RegionR7 | 0.99 | 3.866 | 0.03531 | 0.35780 | |
| RegionR8 | -0.621 | 3.866 | 0.39089 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.257 | 3.866 | 0.87022 | 1.00000 | |
| RegenerationR2 | 0.36 | 3.866 | 0.39988 | 0.81434 | |
| RegenerationR3 | -0.003 | 3.866 | 0.99467 | 1.00000 | |
| RegenerationR4 | -0.277 | 3.866 | 0.57603 | 0.90419 | |
| RegenerationR5 | 0.103 | 3.866 | 0.82448 | 0.99566 | |
| RegenerationR6 | 0.002 | 3.866 | 0.99750 | 1.00000 | |
| RegenerationBL | -0.415 | 3.866 | 0.50478 | 0.86859 | |
| RegenerationTP | -1.451 | 3.866 | 0.04671 | 0.35711 |
Genes with expression patterns similar to MligTC455_47505
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47505 | 550 | 11.45 | Mlig455_018902 | Neo: - Age: - |
CCM2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018902 {REF} {Length: 3270} {TRANSSPLICED} {Pfam: Cerebral cavernous malformation protein, harmonin-homology [PF16545.7, score=42.4]} {Human: ENSG00000136280, CCM2, CCM2 scaffold protein, [RH, Score=121, Expect=2e-29]} {Mouse: ENSMUSG00000000378, Ccm2, cerebral cavernous malformation 2, [RH, Score=125, Expect=4e-31]} {Smed: dd_Smed_v6_9706_0_1, dd_Smed_v6_9706_0_1, [RH, Score=97.1, Expect=8e-22]} {RNA1509_21291, RNA1509_53128, RNA1509_53195} {RNA1310_6986, RNA1509_21291, RNA1509_53128, RNA1509_53195} {RNA1509_21291, RNA1509_53128, RNA1509_53195, RNA815_16876} |
| 2. | MligTC455_41198 | 845 | 17.6 | Mlig455_057580 | Neo: - Age: Down-Up-Up |
0.952 | - | - | - | 0.952 | - | - | Mlig455_057580 {REF} {Length: 2073} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4773) [PF15998.7, score=53.1]} {Smed: dd_Smed_v6_9141_0_1, dd_Smed_v6_9141_0_1, [Score=72.4, Expect=1e-14]} {RNA1509_24224, RNA1509_26450, RNA1509_38022, RNA1509_38817, RNA1509_49375} {RNA1310_25646, RNA1509_24224, RNA1509_26450, RNA1509_38022, RNA1509_38817, RNA1509_49375} {RNA1509_24224, RNA1509_26450, RNA1509_38022, RNA1509_38817, RNA1509_49375, RNA815_12740} | |
| 3. | MligTC455_52409 | 790 | 16.46 | Mlig455_031784 | Neo: - Age: Up-Down-Down Regeneration-upregulated R6: 1.928 Regeneration-enriched R6: 1.928 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_031784 {REF} {Length: 5819} {TRANSSPLICED} {Dmel: FBgn0053196, dpy, dumpy, [Score=58.9, Expect=5e-08]} {RNA1509_1380, RNA1509_21392, RNA1509_45445} {RNA1310_585.1, RNA1509_1380, RNA1509_21392, RNA1509_45445} {RNA1509_1380, RNA1509_21392, RNA1509_45445, RNA815_122.1} |
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