TomoSeq data search

Data search

Results for MligTC455_47521

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47521	275	5.72	Mlig455_033377	Neo: - Age: logFC(26M/2M)=-0.355	LRRC74A	Mlig455_033377 {REF} {Length: 2516} {Pfam: Leucine Rich repeat [PF13516.8, score=52.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=32.5]; AAA domain [PF13401.8, score=24.8]; AAA ATPase domain [PF13191.8, score=23.7]; Leucine Rich Repeat [PF00560.35, score=19.8]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=104, Expect=2e-23]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=103, Expect=3e-23]} {Celegans: WBGene00016045, spas-1, Probable spastin homolog spas-1, [Score=48.9, Expect=7e-06]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=92.0, Expect=1e-19]} {RNA1509_52258} {RNA1310_26121} {RNA815_10842}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47521

275

5.72

Mlig455_033377

Neo: -

Age: logFC(26M/2M)=-0.355

LRRC74A

Mlig455_033377 {REF} {Length: 2516} {Pfam: Leucine Rich repeat [PF13516.8, score=52.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=32.5]; AAA domain [PF13401.8, score=24.8]; AAA ATPase domain [PF13191.8, score=23.7]; Leucine Rich Repeat [PF00560.35, score=19.8]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=104, Expect=2e-23]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=103, Expect=3e-23]} {Celegans: WBGene00016045, spas-1, Probable spastin homolog spas-1, [Score=48.9, Expect=7e-06]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=92.0, Expect=1e-19]} {RNA1509_52258} {RNA1310_26121} {RNA815_10842}

Cumulative graph for MligTC455_47521

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.499	2.932	0.71465	1.00000
RegionR2	0.605	2.932	0.40079	0.79520
RegionR3	0.286	2.932	0.64022	1.00000
RegionR4	-0.533	2.932	0.46737	0.79551
RegionR5	-1.209	2.932	0.05127	0.19100
RegionR6	0.077	2.932	0.89691	1.00000
RegionR7	1.082	2.932	0.09015	0.57490
RegionR8	-0.807	2.932	0.40142	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.419	2.932	0.17120	0.91495
RegenerationR2	-0.926	2.932	0.18812	0.63142
RegenerationR3	-0.814	2.932	0.27669	0.71026
RegenerationR4	-0.491	2.932	0.52473	0.88165
RegenerationR5	-0.194	2.932	0.79319	0.98696
RegenerationR6	-1.304	2.932	0.10461	0.40068
RegenerationBL	-1.072	2.932	0.24915	0.60512
RegenerationTP	0.231	2.932	0.78998	1.00000

Genes with expression patterns similar to MligTC455_47521

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47521	275	5.72	Mlig455_033377	Neo: - Age: logFC(26M/2M)=-0.355	LRRC74A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_033377 {REF} {Length: 2516} {Pfam: Leucine Rich repeat [PF13516.8, score=52.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=32.5]; AAA domain [PF13401.8, score=24.8]; AAA ATPase domain [PF13191.8, score=23.7]; Leucine Rich Repeat [PF00560.35, score=19.8]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=104, Expect=2e-23]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=103, Expect=3e-23]} {Celegans: WBGene00016045, spas-1, Probable spastin homolog spas-1, [Score=48.9, Expect=7e-06]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=92.0, Expect=1e-19]} {RNA1509_52258} {RNA1310_26121} {RNA815_10842}
2.	MligTC455_39801	629	13.11	Mlig455_018741	Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R5: 2.266/0.00116	NDUFAF3	0.954	-	-	-	0.954	-	-	Mlig455_018741 {REF} {Length: 1159} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF498/DUF598) [PF04430.16, score=76.3]} {Human: ENSG00000178057, NDUFAF3, NADH:ubiquinone oxidoreductase complex assembly factor 3, [RH, Score=76.3, Expect=5e-16]} {Mouse: ENSMUSG00000070283, Ndufaf3, NADH:ubiquinone oxidoreductase complex assembly factor 3, [RH, Score=73.2, Expect=5e-15]} {Dmel: FBgn0034919, CG5569, [RH, Score=105, Expect=4e-27]} {Celegans: WBGene00011123, nuaf-3, NADH:Ubiquinone oxidoreductase Assembly Factor, [RH, Score=105, Expect=2e-26]} {Smed: dd_Smed_v6_4891_0_1, dd_Smed_v6_4891_0_1, [RH, Score=110, Expect=3e-28]} {RNA1509_13305, RNA1509_20779, RNA1509_23714} {RNA1310_30623, RNA1509_13305, RNA1509_20779, RNA1509_23714} {RNA1509_13305, RNA1509_20779, RNA1509_23714, RNA815_13719}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_47521

275

5.72

Mlig455_033377

Neo: -

Age: logFC(26M/2M)=-0.355

LRRC74A

1.000

MligTC455_39801

629

13.11

Mlig455_018741

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R5: 2.266/0.00116

NDUFAF3

0.954

Mlig455_018741 {REF} {Length: 1159} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF498/DUF598) [PF04430.16, score=76.3]} {Human: ENSG00000178057, NDUFAF3, NADH:ubiquinone oxidoreductase complex assembly factor 3, [RH, Score=76.3, Expect=5e-16]} {Mouse: ENSMUSG00000070283, Ndufaf3, NADH:ubiquinone oxidoreductase complex assembly factor 3, [RH, Score=73.2, Expect=5e-15]} {Dmel: FBgn0034919, CG5569, [RH, Score=105, Expect=4e-27]} {Celegans: WBGene00011123, nuaf-3, NADH:Ubiquinone oxidoreductase Assembly Factor, [RH, Score=105, Expect=2e-26]} {Smed: dd_Smed_v6_4891_0_1, dd_Smed_v6_4891_0_1, [RH, Score=110, Expect=3e-28]} {RNA1509_13305, RNA1509_20779, RNA1509_23714} {RNA1310_30623, RNA1509_13305, RNA1509_20779, RNA1509_23714} {RNA1509_13305, RNA1509_20779, RNA1509_23714, RNA815_13719}