Data search
Results for MligTC455_47583
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47583 | 253 | 5.27 | Mlig455_050169 | Neo: Int S/G2/M Age: - Region-specific R5: 2.576 Region-enriched R5: 1.978/0.00001 |
Mlig455_050169 {REF} {Length: 2525} {TRANSSPLICED} {RNA1509_15871} {RNA1310_18672, RNA1509_15871} {RNA1509_15871, RNA815_18285} |
Cumulative graph for MligTC455_47583
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.165 | 3.001 | 0.42297 | 1.00000 | |
| RegionR2 | 0.393 | 3.001 | 0.60678 | 0.95556 | |
| RegionR3 | -0.063 | 3.001 | 0.90356 | 1.00000 | |
| RegionR4 | -0.29 | 3.001 | 0.71911 | 1.00000 | |
| RegionR5 | 1.978 | 3.001 | 0.00000 | 0.00001 | Specific for R5: 2.576 |
| RegionR6 | -1.4 | 3.001 | 0.02054 | 0.25886 | |
| RegionR7 | -1.37 | 3.001 | 0.12549 | 0.66733 | |
| RegionR8 | -0.413 | 3.001 | 0.65505 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.254 | 3.001 | 0.91561 | 1.00000 | |
| RegenerationR2 | -0.194 | 3.001 | 0.74910 | 0.97298 | |
| RegenerationR3 | 0.576 | 3.001 | 0.37588 | 0.78759 | |
| RegenerationR4 | -0.049 | 3.001 | 0.94055 | 1.00000 | |
| RegenerationR5 | -0.343 | 3.001 | 0.51836 | 0.86864 | |
| RegenerationR6 | 0.429 | 3.001 | 0.65817 | 0.90229 | |
| RegenerationBL | 1.572 | 3.001 | 0.13458 | 0.43707 | |
| RegenerationTP | 1.165 | 3.001 | 0.22622 | 0.67121 |
Genes with expression patterns similar to MligTC455_47583
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47583 | 253 | 5.27 | Mlig455_050169 | Neo: Int S/G2/M Age: - Region-specific R5: 2.576 Region-enriched R5: 1.978/0.00001 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_050169 {REF} {Length: 2525} {TRANSSPLICED} {RNA1509_15871} {RNA1310_18672, RNA1509_15871} {RNA1509_15871, RNA815_18285} | |
| 2. | MligTC455_47584 | 258 | 5.37 | Mlig455_067003 | Neo: - Age: Down-Up-Up Region-specific R5: 2.569 Region-enriched R5: 1.919/0.00001 |
C19orf12 | 5.926 | 1.000 | 0.999 | 0.991 | 0.949 | 0.989 | 0.998 | Mlig455_067003 {REF} {Length: 2631} {TRANSSPLICED} {Human: ENSG00000131943, C19orf12, chromosome 19 open reading frame 12, [Score=52.8, Expect=1e-07]} {Mouse: ENSMUSG00000054676, 1600014C10Rik, RIKEN cDNA 1600014C10 gene, [Score=62.4, Expect=3e-11]} {Dmel: FBgn0023530, CG3740, [Score=54.3, Expect=2e-08]} {RNA1509_15871, RNA1509_29815} {RNA1310_18672, RNA1509_29815} {RNA1509_29815, RNA815_18285} |
| 3. | MligTC455_33274 | 118 | 2.46 | Mlig455_056195 | Neo: - Age: Down-Up-Down Region-enriched R5: 3.500/0.00000 |
0.969 | - | - | - | - | - | 0.969 | Mlig455_056195 {REF} {Length: 766} {RNA1509_5283} {RNA1310_38465.1} {RNA815_18077} | |
| 4. | MligTC455_36745 | 334 | 6.96 | Mlig455_057150 | Neo: Irradiation Age: Up-Down-Down |
SUN1 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_057150 {REF} {Length: 6463} {TRANSSPLICED} {Pfam: Sad1 / UNC-like C-terminal [PF07738.15, score=97.0]} {Human: ENSG00000164828, SUN1, Sad1 and UNC84 domain containing 1, [RH, Score=162, Expect=8e-41]; ENSG00000100242, SUN2, Sad1 and UNC84 domain containing 2, [RH, Score=158, Expect=3e-39]} {Mouse: ENSMUSG00000042524, Sun2, Sad1 and UNC84 domain containing 2, [RH, Score=157, Expect=3e-39]} {Dmel: FBgn0265003, koi, klaroid, [RH, Score=174, Expect=3e-44]} {Celegans: WBGene00006816, unc-84, Nuclear migration and anchoring protein unc-84, [RH, Score=106, Expect=3e-23]} {Smed: dd_Smed_v6_10787_0_1, dd_Smed_v6_10787_0_1, [RH, Score=151, Expect=2e-37]} {RNA1509_42951, RNA1509_8446} {RNA1310_1369.1, RNA1509_42951} {RNA1509_42951, RNA815_825} |
| 5. | MligTC455_34291 | 254 | 5.29 | Mlig455_028897 | Neo: Irradiation Age: logFC(26M/2M)=0.396 Region-enriched R5: 1.944/0.00597 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_028897 {REF} {Length: 3012} {TRANSSPLICED} {Pfam: YjeF-related protein N-terminus [PF03853.17, score=41.4]} {RNA1509_26437, RNA1509_34546, RNA1509_40238} {RNA1310_13030, RNA1509_26437, RNA1509_34546, RNA1509_40238} {RNA1509_26437, RNA1509_34546, RNA1509_40238, RNA815_6218} | |
| 6. | MligTC455_19217 | 228 | 4.74 | Mlig455_038961 | Neo: - Age: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_038961 {REF} {Length: 1986} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_42696} {RNA815_49860} | |
| 7. | MligTC455_32494 | 35 | 0.73 | Mlig455_022654 | Neo: - Age: Up-Down-Down Regeneration-upregulated R5: 5.979 Regeneration-enriched R5: 5.979 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_022654 {REF} {Length: 1748} {TRANSSPLICED} {Pfam: Beta-lactamase [PF00144.26, score=174.2]} {Celegans: WBGene00010877, lact-4, Beta-LACTamase domain containing, [RH, Score=214, Expect=5e-65]} {Smed: dd_Smed_v6_8380_0_1, dd_Smed_v6_8380_0_1, [RH, Score=167, Expect=4e-47]} {RNA1509_16305} {RNA1310_17936.2} {RNA815_7035} | |
| 8. | MligTC455_22863 | 207 | 4.31 | Mlig455_016956 | Neo: - Age: - Region-enriched R5: 1.631/0.00395 |
TOPORS | 0.955 | - | - | - | - | - | 0.955 | Mlig455_016956 {REF} {Length: 3896} {Pfam: Ring finger domain [PF13639.8, score=33.8]; RING-H2 zinc finger domain [PF12678.9, score=27.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.2]; RING-type zinc-finger [PF13445.8, score=23.0]; Zinc-ribbon, C4HC2 type [PF17120.7, score=21.8]} {Human: ENSG00000197579, TOPORS, TOP1 binding arginine/serine rich protein, [Score=50.1, Expect=4e-06]} {Mouse: ENSMUSG00000036822, Topors, topoisomerase I binding, arginine/serine-rich, [Score=49.7, Expect=4e-06]} {Dmel: FBgn0037344, CG2926, [Score=65.5, Expect=3e-11]} {Smed: dd_Smed_v6_8691_0_1, dd_Smed_v6_8691_0_1, [Score=47.0, Expect=1e-06]} {RNA1509_14851} {RNA1310_7090.1} {RNA815_11461} |
| 9. | MligTC455_16933 | 502 | 10.45 | Mlig455_022729 | Neo: Irradiation Age: - Region-enriched R5: 1.943/0.00000 |
KIF23 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_022729 {REF} {Length: 3615} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=298.5]; Arf6-interacting domain of mitotic kinesin-like protein 1 [PF16540.7, score=92.9]; Microtubule binding [PF16796.7, score=60.9]} {Human: ENSG00000137807, KIF23, kinesin family member 23, [RH, Score=428, Expect=1e-136]} {Mouse: ENSMUSG00000032254, Kif23, kinesin family member 23, [RH, Score=384, Expect=5e-119]} {Dmel: FBgn0011692, pav, pavarotti, [RH, Score=434, Expect=6e-139]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [RH, Score=377, Expect=8e-119]} {Smed: dd_Smed_v6_9585_0_1, dd_Smed_v6_9585_0_1, [RH, Score=276, Expect=9e-82]} {RNA1509_39292} {RNA1310_6447.1, RNA1509_39292} {RNA1509_39292, RNA815_8976} |
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