TomoSeq data search

Data search

Results for MligTC455_47615

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47615	543	11.31	Mlig455_002336, Mlig455_029124, Mlig455_062438	Neo: - Age: -		Mlig455_002336 {REF} {Length: 403} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52545} {RNA1310_69989} {RNA815_23469.3} Mlig455_029124 {REF} {Length: 403} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52545} {RNA1310_69989, RNA1509_52545} {RNA1509_52545, RNA815_23469.3} Mlig455_062438 {REF} {Length: 407} {NoTransDecoderORF} {RNA1509_52545} {RNA1310_69989} {RNA815_23469.3}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_47615

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.737	3.859	0.07776	0.61273
RegionR2	1.036	3.859	0.32709	0.71915
RegionR3	0.769	3.859	0.42054	0.94391
RegionR4	0.302	3.859	0.73239	1.00000
RegionR5	0.417	3.859	0.64510	0.99718
RegionR6	0.714	3.859	0.46176	1.00000
RegionR7	1.988	3.859	0.01146	0.18693
RegionR8	1.512	3.859	0.11799	0.63322

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.761	3.859	0.99992	1.00000
RegenerationR2	0.11	3.859	0.86904	1.00000
RegenerationR3	0.495	3.859	0.51193	0.86242
RegenerationR4	0.211	3.859	0.79495	0.98494
RegenerationR5	0.617	3.859	0.39298	0.79419
RegenerationR6	0.097	3.859	0.89228	1.00000
RegenerationBL	-3.632	3.859	0.00179	0.03360
RegenerationTP	-0.799	3.859	0.33564	0.77989

Genes with expression patterns similar to MligTC455_47615

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47615	543	11.31	Mlig455_002336, Mlig455_029124, Mlig455_062438	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002336 {REF} {Length: 403} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52545} {RNA1310_69989} {RNA815_23469.3} Mlig455_029124 {REF} {Length: 403} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52545} {RNA1310_69989, RNA1509_52545} {RNA1509_52545, RNA815_23469.3} Mlig455_062438 {REF} {Length: 407} {NoTransDecoderORF} {RNA1509_52545} {RNA1310_69989} {RNA815_23469.3}
2.	MligTC455_39772	149	3.1	Mlig455_021243	Neo: - Age: - Region-enriched R7: 3.021/0.00442	GEM	0.956	0.956	-	-	-	-	-	Mlig455_021243 {REF} {Length: 3783} {Pfam: Ras family [PF00071.24, score=77.9]; RsgA GTPase [PF03193.18, score=24.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=21.0]} {Human: ENSG00000164949, GEM, GTP binding protein overexpressed in skeletal muscle, [Score=97.4, Expect=8e-22]} {Mouse: ENSMUSG00000028214, Gem, GTP binding protein (gene overexpressed in skeletal muscle), [Score=97.4, Expect=5e-22]} {Dmel: FBgn0264753, Rgk1, Rad, Gem/Kir family member 1, [RH, Score=150, Expect=9e-38]} {Celegans: WBGene00013124, Y52B11A.4, [RH, Score=80.9, Expect=5e-16]} {Smed: dd_Smed_v6_11010_0_1, dd_Smed_v6_11010_0_1, [Score=163, Expect=9e-45]} {RNA1310_32533.1} {RNA815_17720}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_47615

543

11.31

Mlig455_002336, Mlig455_029124, Mlig455_062438

Neo: -

Age: -

1.000

Mlig455_002336 {REF} {Length: 403} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52545} {RNA1310_69989} {RNA815_23469.3}

Mlig455_029124 {REF} {Length: 403} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52545} {RNA1310_69989, RNA1509_52545} {RNA1509_52545, RNA815_23469.3}

Mlig455_062438 {REF} {Length: 407} {NoTransDecoderORF} {RNA1509_52545} {RNA1310_69989} {RNA815_23469.3}

MligTC455_39772

149

3.1

Mlig455_021243

Neo: -

Age: -

Region-enriched R7: 3.021/0.00442

GEM

0.956

Mlig455_021243 {REF} {Length: 3783} {Pfam: Ras family [PF00071.24, score=77.9]; RsgA GTPase [PF03193.18, score=24.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=21.0]} {Human: ENSG00000164949, GEM, GTP binding protein overexpressed in skeletal muscle, [Score=97.4, Expect=8e-22]} {Mouse: ENSMUSG00000028214, Gem, GTP binding protein (gene overexpressed in skeletal muscle), [Score=97.4, Expect=5e-22]} {Dmel: FBgn0264753, Rgk1, Rad, Gem/Kir family member 1, [RH, Score=150, Expect=9e-38]} {Celegans: WBGene00013124, Y52B11A.4, [RH, Score=80.9, Expect=5e-16]} {Smed: dd_Smed_v6_11010_0_1, dd_Smed_v6_11010_0_1, [Score=163, Expect=9e-45]} {RNA1310_32533.1} {RNA815_17720}