Data search
Results for MligTC455_47722
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47722 | 550 | 11.45 | Mlig455_017395, Mlig455_017473 | Neo: - Age: logFC(26M/2M)=0.675 |
Mlig455_017395 {REF} {Length: 1157} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46153} {RNA1310_8118} {RNA815_26380} Mlig455_017473 {REF} {Length: 1153} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46153, RNA1509_51268} {RNA1310_8118, RNA1509_51268} {RNA1509_51268, RNA815_26380} |
Cumulative graph for MligTC455_47722
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.892 | 3.936 | 0.56349 | 1.00000 | |
| RegionR2 | -0.247 | 3.936 | 0.73168 | 1.00000 | |
| RegionR3 | -0.241 | 3.936 | 0.68869 | 1.00000 | |
| RegionR4 | 0.468 | 3.936 | 0.43456 | 0.76343 | |
| RegionR5 | 1.213 | 3.936 | 0.01115 | 0.06237 | |
| RegionR6 | 0.93 | 3.936 | 0.07544 | 0.51031 | |
| RegionR7 | 0.975 | 3.936 | 0.10993 | 0.62876 | |
| RegionR8 | -2.208 | 3.936 | 0.06710 | 0.49902 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.497 | 3.936 | 0.19490 | 0.93332 | |
| RegenerationR2 | 0.174 | 3.936 | 0.75589 | 0.97490 | |
| RegenerationR3 | -0.394 | 3.936 | 0.51741 | 0.86539 | |
| RegenerationR4 | -0.809 | 3.936 | 0.17009 | 0.60668 | |
| RegenerationR5 | -0.385 | 3.936 | 0.47111 | 0.84232 | |
| RegenerationR6 | -1.006 | 3.936 | 0.08000 | 0.35318 | |
| RegenerationBL | 1.21 | 3.936 | 0.07488 | 0.31992 | |
| RegenerationTP | -0.598 | 3.936 | 0.58314 | 0.95185 |
Genes with expression patterns similar to MligTC455_47722
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47722 | 550 | 11.45 | Mlig455_017395, Mlig455_017473 | Neo: - Age: logFC(26M/2M)=0.675 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017395 {REF} {Length: 1157} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46153} {RNA1310_8118} {RNA815_26380} Mlig455_017473 {REF} {Length: 1153} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46153, RNA1509_51268} {RNA1310_8118, RNA1509_51268} {RNA1509_51268, RNA815_26380} |
|
| 2. | MligTC455_46488 | 778 | 16.2 | Mlig455_067216 | Neo: - Age: logFC(26M/2M)=0.275 |
NSF | 0.96 | - | - | - | - | 0.960 | - | Mlig455_067216 {REF} {Length: 3216} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=173.9]; AAA+ lid domain [PF17862.3, score=40.3]; AAA ATPase domain [PF13191.8, score=36.7]; AAA domain [PF13401.8, score=36.2]; TIP49 P-loop domain [PF06068.15, score=31.5]; AAA domain [PF13238.8, score=30.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=29.2]; NACHT domain [PF05729.14, score=28.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=28.3]; AAA domain [PF13671.8, score=27.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=27.6]; Magnesium chelatase, subunit ChlI [PF01078.23, score=24.3]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=24.1]; AAA domain [PF13173.8, score=22.8]; RNA helicase [PF00910.24, score=22.5]; IstB-like ATP binding protein [PF01695.19, score=22.5]; Cell division protein 48 (CDC48), domain 2 [PF02933.19, score=22.2]; Cell division protein 48 (CDC48), N-terminal domain [PF02359.20, score=21.9]; ATPase domain predominantly from Archaea [PF01637.20, score=21.1]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=19.6]; AAA domain [PF13086.8, score=19.0]} {Human: ENSG00000276262, NSF, N-ethylmaleimide sensitive factor, vesicle fusing ATPase, [RH, Score=723, Expect=0.0]; ENSG00000073969, NSF, N-ethylmaleimide sensitive factor, vesicle fusing ATPase, [RH, Score=723, Expect=0.0]; ENSG00000278174, NSF, N-ethylmaleimide sensitive factor, vesicle fusing ATPase, [RH, Score=723, Expect=0.0]} {Mouse: ENSMUSG00000034187, Nsf, N-ethylmaleimide sensitive fusion protein, [RH, Score=724, Expect=0.0]} {Dmel: FBgn0266464, Nsf2, N-ethylmaleimide-sensitive factor 2, [Score=752, Expect=0.0]} {Celegans: WBGene00003818, nsf-1, Vesicle-fusing ATPase, [RH, Score=658, Expect=0.0]} {Smed: dd_Smed_v6_3364_0_1, dd_Smed_v6_3364_0_1, [Score=583, Expect=0.0]} {RNA1509_25873, RNA1509_31594, RNA1509_34048, RNA1509_58840} {RNA1310_9210, RNA1509_25873, RNA1509_31594, RNA1509_34048, RNA1509_58840} {RNA1509_25873, RNA1509_31594, RNA1509_34048, RNA1509_58840, RNA815_3152} |
| 3. | MligTC455_34123 | 200 | 4.18 | Mlig455_064846 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_064846 {REF} {Length: 3316} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=29.6]} {RNA1509_20621, RNA1509_52026} {RNA1310_4019, RNA1509_52026} {RNA1509_52026, RNA815_15497} | |
| 4. | MligTC455_19292 | 1034 | 21.54 | Mlig455_001762 | Neo: - Age: logFC(26M/2M)=0.672 Region-enriched R4: 1.453/0.00093 |
SH3KBP1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_001762 {REF} {Length: 4036} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=95.7]; SH3 domain [PF00018.30, score=78.8]; Variant SH3 domain [PF07653.19, score=66.5]} {Human: ENSG00000147010, SH3KBP1, SH3 domain containing kinase binding protein 1, [RH, Score=92.4, Expect=1e-19]} {Mouse: ENSMUSG00000040990, Sh3kbp1, SH3-domain kinase binding protein 1, [RH, Score=93.6, Expect=3e-20]} {Dmel: FBgn0027598, cindr, CIN85 and CD2AP related, [Score=67.4, Expect=8e-12]} {Celegans: WBGene00003374, mlk-1, Mitogen-activated protein kinase kinase kinase mlk-1, [Score=58.2, Expect=7e-09]} {Smed: dd_Smed_v6_1522_0_1, dd_Smed_v6_1522_0_1, [Score=123, Expect=6e-31]} {RNA1509_50050} {RNA1310_6080.1, RNA1509_50050} {RNA1509_50050, RNA815_5457} |
Berezikov Lab - 2020-2021 © ERIBA