TomoSeq data search

Data search

Results for MligTC455_47775

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47775	23	0.47	Mlig455_034070, Mlig455_034072	Neo: - Age: -	CHRNA9	Mlig455_034070 {REF} {Length: 2542} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=124.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=91.4]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=211, Expect=1e-61]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=207, Expect=2e-60]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=207, Expect=9e-61]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=202, Expect=1e-58]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=5e-58]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=5e-58]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=201, Expect=1e-57]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=215, Expect=2e-63]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=205, Expect=2e-59]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=218, Expect=5e-64]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=195, Expect=6e-56]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=202, Expect=2e-58]} {RNA1310_15334} {RNA815_16260.2} Mlig455_034072 {REF} {Length: 1166} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=120.5]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=130, Expect=2e-34]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=129, Expect=3e-34]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=126, Expect=2e-33]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=134, Expect=4e-38]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=126, Expect=3e-33]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=110, Expect=2e-27]} {Smed: dd_Smed_v6_11839_0_2, dd_Smed_v6_11839_0_2, [Score=114, Expect=6e-29]} {RNA1310_15334} {RNA815_16260.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47775

0.47

Mlig455_034070, Mlig455_034072

Neo: -

Age: -

CHRNA9

Mlig455_034070 {REF} {Length: 2542} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=124.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=91.4]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=211, Expect=1e-61]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=207, Expect=2e-60]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=207, Expect=9e-61]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=202, Expect=1e-58]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=5e-58]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=5e-58]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=201, Expect=1e-57]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=215, Expect=2e-63]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=205, Expect=2e-59]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=218, Expect=5e-64]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=195, Expect=6e-56]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=202, Expect=2e-58]} {RNA1310_15334} {RNA815_16260.2}

Mlig455_034072 {REF} {Length: 1166} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=120.5]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=130, Expect=2e-34]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=129, Expect=3e-34]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=126, Expect=2e-33]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=134, Expect=4e-38]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=126, Expect=3e-33]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=110, Expect=2e-27]} {Smed: dd_Smed_v6_11839_0_2, dd_Smed_v6_11839_0_2, [Score=114, Expect=6e-29]} {RNA1310_15334} {RNA815_16260.2}

Cumulative graph for MligTC455_47775

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.38	0.905	1.00000	1.00000
RegionR2	1.069	0.905	0.99921	1.00000
RegionR3	1.642	0.905	0.89236	1.00000
RegionR4	-2.026	0.905	1.00000	1.00000
RegionR5	-0.917	0.905	0.96476	1.00000
RegionR6	-0.12	0.905	0.99341	1.00000
RegionR7	-2.204	0.905	1.00000	1.00000
RegionR8	2.935	0.905	0.84777	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.272	0.905	1.00000	1.00000
RegenerationR2	-0.23	0.905	0.85938	1.00000
RegenerationR3	-1.434	0.905	0.44132	0.82773
RegenerationR4	-1.115	0.905	1.00000	1.00000
RegenerationR5	-0.483	0.905	0.42508	0.81446
RegenerationR6	-3.207	0.905	0.21115	0.55438
RegenerationBL	-3.112	0.905	1.00000	1.00000
RegenerationTP	-2.958	0.905	0.99997	1.00000

Genes with expression patterns similar to MligTC455_47775

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47775	23	0.47	Mlig455_034070, Mlig455_034072	Neo: - Age: -	CHRNA9	3	1.000	-	1.000	-	1.000	-	Mlig455_034070 {REF} {Length: 2542} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=124.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=91.4]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=211, Expect=1e-61]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=207, Expect=2e-60]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=207, Expect=9e-61]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=202, Expect=1e-58]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=5e-58]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=5e-58]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=201, Expect=1e-57]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=215, Expect=2e-63]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=205, Expect=2e-59]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=218, Expect=5e-64]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=195, Expect=6e-56]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=202, Expect=2e-58]} {RNA1310_15334} {RNA815_16260.2} Mlig455_034072 {REF} {Length: 1166} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=120.5]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=130, Expect=2e-34]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=129, Expect=3e-34]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=126, Expect=2e-33]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=134, Expect=4e-38]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=126, Expect=3e-33]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=110, Expect=2e-27]} {Smed: dd_Smed_v6_11839_0_2, dd_Smed_v6_11839_0_2, [Score=114, Expect=6e-29]} {RNA1310_15334} {RNA815_16260.2}
2.	MligTC455_12582	46	0.96	Mlig455_031680	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.597 Region-enriched R6: 3.142/0.04850	BIRC3	0.991	-	-	0.991	-	-	-	Mlig455_031680 {REF} {Length: 1205} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=59.9]} {Human: ENSG00000023445, BIRC3, baculoviral IAP repeat containing 3, [Score=69.7, Expect=7e-13]; ENSG00000110330, BIRC2, baculoviral IAP repeat containing 2, [Score=67.4, Expect=4e-12]} {Mouse: ENSMUSG00000038840, Birc7, baculoviral IAP repeat-containing 7 (livin), [Score=65.5, Expect=6e-12]; ENSMUSG00000057367, Birc2, baculoviral IAP repeat-containing 2, [Score=62.4, Expect=1e-10]} {Dmel: FBgn0260635, Diap1, Death-associated inhibitor of apoptosis 1, [Score=47.8, Expect=5e-06]} {Smed: dd_Smed_v6_14261_0_1, dd_Smed_v6_14261_0_1, [Score=46.6, Expect=2e-06]} {RNA1509_53592} {RNA1310_29899} {RNA815_29710}
3.	MligTC455_04347	12	0.25	Mlig455_001933	Neo: - Age: -		0.981	-	-	0.981	-	-	-	Mlig455_001933 {REF} {Length: 2640} {Pfam: Glycine rich protein [PF12810.9, score=18.7]} {RNA1509_56885} {RNA1310_39442.1, RNA1509_56885} {RNA1509_56885, RNA815_41132}
4.	MligTC455_36038	63	1.32	Mlig455_015965	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.708		0.978	0.978	-	-	-	-	-	Mlig455_015965 {REF} {Length: 2113} {Pfam: Crescentin protein [PF19220.2, score=18.6]; Filament-like plant protein, long coiled-coil [PF05911.13, score=18.1]} {RNA1310_31643} {RNA815_23345}
5.	MligTC455_36046	34	0.7	Mlig455_015198	Neo: - Age: Up-Down-Down	PLEC	0.954	-	-	0.954	-	-	-	Mlig455_015198 {REF} {Length: 5456} {TRANSSPLICED} {Human: ENSG00000178209, PLEC, plectin, [Score=57.0, Expect=3e-07]} {Mouse: ENSMUSG00000022565, Plec, plectin, [Score=55.8, Expect=4e-07]} {Dmel: FBgn0031842, Tango1, Transport and Golgi organization 1, [Score=54.3, Expect=8e-07]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=80.5, Expect=4e-15]} {RNA1509_52379} {RNA1310_5289} {RNA815_36944}
6.	MligTC455_36685	249	5.19	Mlig455_011304, Mlig455_022484, Mlig455_038580, Mlig455_053177, Mlig455_053195, Mlig455_054147, Mlig455_057048	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_011304 {REF} {Length: 2066} {RNA1310_36097} {RNA815_32539} Mlig455_022484 {REF} {Length: 1980} {RNA1310_36097} {RNA815_32539} Mlig455_038580 {REF} {Length: 1727} {RNA1310_36097} {RNA815_32539} Mlig455_053177 {REF} {Length: 1901} {RNA1310_36097} {RNA815_32539} Mlig455_053195 {REF} {Length: 1903} {RNA1310_36097} {RNA815_32539} Mlig455_054147 {REF} {Length: 709} {RNA1310_36097} {RNA815_32539} Mlig455_057048 {REF} {Length: 2030} {RNA1310_36097} {RNA815_32539}
7.	MligTC455_53991	37	0.77	Mlig455_026046	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_026046 {REF} {Length: 3345} {TRANSSPLICED} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}
8.	MligTC455_09654	12	0.25	Mlig455_059788	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_059788 {REF} {Length: 2561} {NoTransDecoderORF} {RNA1509_53775} {RNA1310_109810} {RNA815_40539}
9.	MligTC455_39973	9	0.19	Mlig455_021907	Neo: - Age: -	ADRA1B	0.95	-	-	0.950	-	-	-	Mlig455_021907 {REF} {Length: 2264} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=120.6]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=38.6]; Olfactory receptor [PF13853.8, score=27.0]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=22.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=19.9]} {Human: ENSG00000170214, ADRA1B, adrenoceptor alpha 1B, [Score=70.1, Expect=3e-12]; ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=68.2, Expect=9e-12]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [Score=72.0, Expect=3e-13]; ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=70.1, Expect=1e-12]; ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=70.1, Expect=1e-12]; ENSMUSG00000050541, Adra1b, adrenergic receptor, alpha 1b, [Score=70.1, Expect=2e-12]} {Dmel: FBgn0038874, ETHR, [Score=101, Expect=4e-23]} {Celegans: WBGene00017176, nmur-3, NMUR (NeuroMedin U Receptor) homolog, [Score=85.1, Expect=9e-18]} {Smed: dd_Smed_v6_10325_0_1, dd_Smed_v6_10325_0_1, [Score=79.0, Expect=9e-16]} {RNA1310_18037.2} {RNA815_41471}