TomoSeq data search

Data search

Results for MligTC455_47789

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47789	726	15.12	Mlig455_019724	Neo: - Age: -		Mlig455_019724 {REF} {Length: 1711} {NoTransDecoderORF} {RNA1509_35134, RNA1509_36975} {RNA1310_14014, RNA1509_35134} {RNA1509_35134, RNA815_10926.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_47789

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.334	4.189	0.74714	1.00000
RegionR2	0.109	4.189	0.78845	1.00000
RegionR3	-0.282	4.189	0.39460	0.92445
RegionR4	0.488	4.189	0.22464	0.51584
RegionR5	-0.263	4.189	0.39982	0.75681
RegionR6	-0.059	4.189	0.86120	1.00000
RegionR7	-0.49	4.189	0.30932	0.94339
RegionR8	0.162	4.189	0.77203	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.381	4.189	0.77747	1.00000
RegenerationR2	-0.475	4.189	0.13544	0.56264
RegenerationR3	-0.175	4.189	0.63678	0.92360
RegenerationR4	-0.547	4.189	0.14962	0.57752
RegenerationR5	0.16	4.189	0.64487	0.92975
RegenerationR6	-0.399	4.189	0.29365	0.64415
RegenerationBL	0.055	4.189	0.90451	1.00000
RegenerationTP	-0.799	4.189	0.14531	0.56773

Genes with expression patterns similar to MligTC455_47789

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47789	726	15.12	Mlig455_019724	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_019724 {REF} {Length: 1711} {NoTransDecoderORF} {RNA1509_35134, RNA1509_36975} {RNA1310_14014, RNA1509_35134} {RNA1509_35134, RNA815_10926.1}
2.	MligTC455_47788	1168	24.33	Mlig455_004934	Neo: - Age: -	PPP1R16B	3.692	0.940	-	0.911	0.954	0.887	-	Mlig455_004934 {REF} {Length: 4092} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=103.4]; Ankyrin repeats (many copies) [PF13637.8, score=94.4]; Ankyrin repeats (many copies) [PF13857.8, score=81.6]; Ankyrin repeat [PF00023.32, score=70.6]; Ankyrin repeat [PF13606.8, score=70.1]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [RH, Score=328, Expect=9e-105]} {Mouse: ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [RH, Score=327, Expect=6e-105]; ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [RH, Score=325, Expect=6e-104]} {Dmel: FBgn0036801, MYPT-75D, [RH, Score=355, Expect=3e-113]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [RH, Score=272, Expect=9e-85]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [RH, Score=363, Expect=3e-119]} {RNA1509_36975, RNA1509_53605} {RNA1310_14014, RNA1509_36975, RNA1509_53605} {RNA1509_36975, RNA1509_53605, RNA815_10926.1}
3.	MligTC455_21053	652	13.59	Mlig455_027344	Neo: - Age: - Region-enriched R5: 1.297/0.00104	KPNA6	0.961	-	-	-	0.961	-	-	Mlig455_027344 {REF} {Length: 3137} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=125.9]; Atypical Arm repeat [PF16186.7, score=51.1]} {Human: ENSG00000025800, KPNA6, karyopherin subunit alpha 6, [Score=407, Expect=7e-137]; ENSG00000196911, KPNA5, karyopherin subunit alpha 5, [Score=397, Expect=6e-133]} {Mouse: ENSMUSG00000003731, Kpna6, karyopherin (importin) alpha 6, [Score=412, Expect=8e-139]} {Dmel: FBgn0024889, Kap-alpha1, karyopherin alpha1, [Score=378, Expect=1e-125]} {Celegans: WBGene00002074, ima-3, Importin subunit alpha-3, [Score=285, Expect=5e-90]} {Smed: dd_Smed_v6_590_0_1, dd_Smed_v6_590_0_1, [Score=283, Expect=2e-89]} {RNA1509_32318} {RNA1310_14767} {RNA815_19038}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_47789

726

15.12

Mlig455_019724

Neo: -

Age: -

1.000

Mlig455_019724 {REF} {Length: 1711} {NoTransDecoderORF} {RNA1509_35134, RNA1509_36975} {RNA1310_14014, RNA1509_35134} {RNA1509_35134, RNA815_10926.1}

MligTC455_47788

1168

24.33

Mlig455_004934

Neo: -

Age: -

PPP1R16B

3.692

0.940

0.911

0.954

0.887

Mlig455_004934 {REF} {Length: 4092} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=103.4]; Ankyrin repeats (many copies) [PF13637.8, score=94.4]; Ankyrin repeats (many copies) [PF13857.8, score=81.6]; Ankyrin repeat [PF00023.32, score=70.6]; Ankyrin repeat [PF13606.8, score=70.1]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [RH, Score=328, Expect=9e-105]} {Mouse: ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [RH, Score=327, Expect=6e-105]; ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [RH, Score=325, Expect=6e-104]} {Dmel: FBgn0036801, MYPT-75D, [RH, Score=355, Expect=3e-113]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [RH, Score=272, Expect=9e-85]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [RH, Score=363, Expect=3e-119]} {RNA1509_36975, RNA1509_53605} {RNA1310_14014, RNA1509_36975, RNA1509_53605} {RNA1509_36975, RNA1509_53605, RNA815_10926.1}

MligTC455_21053

652

13.59

Mlig455_027344

Neo: -

Age: -

Region-enriched R5: 1.297/0.00104

KPNA6

0.961

Mlig455_027344 {REF} {Length: 3137} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=125.9]; Atypical Arm repeat [PF16186.7, score=51.1]} {Human: ENSG00000025800, KPNA6, karyopherin subunit alpha 6, [Score=407, Expect=7e-137]; ENSG00000196911, KPNA5, karyopherin subunit alpha 5, [Score=397, Expect=6e-133]} {Mouse: ENSMUSG00000003731, Kpna6, karyopherin (importin) alpha 6, [Score=412, Expect=8e-139]} {Dmel: FBgn0024889, Kap-alpha1, karyopherin alpha1, [Score=378, Expect=1e-125]} {Celegans: WBGene00002074, ima-3, Importin subunit alpha-3, [Score=285, Expect=5e-90]} {Smed: dd_Smed_v6_590_0_1, dd_Smed_v6_590_0_1, [Score=283, Expect=2e-89]} {RNA1509_32318} {RNA1310_14767} {RNA815_19038}