Data search
Results for MligTC455_47915
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47915 | 368 | 7.66 | Mlig455_056680 | Neo: Int S/G2/M Age: - |
Mlig455_056680 {REF} {Length: 1523} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=21.6]} {RNA1509_15563} {RNA1310_14236.1} {RNA815_14083} |
Cumulative graph for MligTC455_47915
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.45 | 3.457 | 0.20674 | 0.84607 | |
| RegionR2 | 1.019 | 3.457 | 0.25288 | 0.63232 | |
| RegionR3 | 0.091 | 3.457 | 0.81696 | 1.00000 | |
| RegionR4 | 1.959 | 3.457 | 0.01005 | 0.06128 | |
| RegionR5 | 1.307 | 3.457 | 0.07084 | 0.24030 | |
| RegionR6 | 0.546 | 3.457 | 0.55533 | 1.00000 | |
| RegionR7 | -0.062 | 3.457 | 0.87671 | 1.00000 | |
| RegionR8 | 0.589 | 3.457 | 0.63747 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.873 | 3.457 | 0.99992 | 1.00000 | |
| RegenerationR2 | -0.248 | 3.457 | 0.56256 | 0.90020 | |
| RegenerationR3 | 0.9 | 3.457 | 0.10594 | 0.51511 | |
| RegenerationR4 | 0.225 | 3.457 | 0.66191 | 0.93878 | |
| RegenerationR5 | 0.029 | 3.457 | 0.94977 | 1.00000 | |
| RegenerationR6 | 0.967 | 3.457 | 0.07484 | 0.34202 | |
| RegenerationBL | 0.959 | 3.457 | 0.14562 | 0.45547 | |
| RegenerationTP | 1.395 | 3.457 | 0.06185 | 0.40261 |
Genes with expression patterns similar to MligTC455_47915
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47915 | 368 | 7.66 | Mlig455_056680 | Neo: Int S/G2/M Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056680 {REF} {Length: 1523} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=21.6]} {RNA1509_15563} {RNA1310_14236.1} {RNA815_14083} | |
| 2. | MligTC455_32815 | 200 | 4.17 | Mlig455_024296 | Neo: - Age: Down-Up-Up |
1.763 | - | - | - | 0.808 | - | 0.955 | Mlig455_024296 {REF} {Length: 7900} {TRANSSPLICED} {RNA1509_27479} {RNA1310_7639, RNA1509_27479} {RNA1509_27479, RNA815_28985} | |
| 3. | MligTC455_38871 | 267 | 5.56 | Mlig455_044804 | Neo: - Age: - |
LEMD3 | 1.739 | - | 0.785 | 0.954 | - | - | - | Mlig455_044804 {REF} {Length: 5081} {Pfam: LEM domain [PF03020.17, score=34.4]} {Human: ENSG00000174106, LEMD3, LEM domain containing 3, [RH, Score=74.7, Expect=4e-13]} {Mouse: ENSMUSG00000048661, Lemd3, LEM domain containing 3, [RH, Score=76.3, Expect=7e-14]} {Dmel: FBgn0034962, MAN1, [RH, Score=60.8, Expect=3e-09]} {Smed: dd_Smed_v6_3626_0_1, dd_Smed_v6_3626_0_1, [RH, Score=77.4, Expect=1e-14]} {RNA1509_37408, RNA1509_55130} {RNA1310_3531, RNA1509_37408, RNA1509_55130} {RNA1509_37408, RNA1509_55130, RNA815_1027.1} |
| 4. | MligTC455_36509 | 1001 | 20.86 | Mlig455_049479 | Neo: Int S/G2/M Age: - |
SNRPC | 1.691 | - | - | - | 0.953 | 0.738 | - | Mlig455_049479 {REF} {Length: 827} {TRANSSPLICED} {Pfam: U1 zinc finger [PF06220.14, score=67.7]} {Human: ENSG00000124562, SNRPC, small nuclear ribonucleoprotein polypeptide C, [RH, Score=109, Expect=4e-30]} {Mouse: ENSMUSG00000024217, Snrpc, U1 small nuclear ribonucleoprotein C, [RH, Score=108, Expect=4e-30]} {Dmel: FBgn0261792, snRNP-U1-C, small ribonucleoprotein particle U1 subunit C, [RH, Score=112, Expect=1e-31]} {Celegans: WBGene00017238, F08B4.7, U1 small nuclear ribonucleoprotein C, [RH, Score=102, Expect=4e-28]} {Smed: dd_Smed_v6_3772_0_2, dd_Smed_v6_3772_0_2, [RH, Score=113, Expect=2e-32]} {RNA1509_20825, RNA1509_39188} {RNA1310_43912, RNA1509_20825, RNA1509_39188} {RNA1509_20825, RNA1509_39188, RNA815_57716} |
| 5. | MligTC455_33193 | 320 | 6.66 | Mlig455_000022 | Neo: - |
FIP1L1 | 0.972 | - | - | - | - | - | 0.972 | Mlig455_000022 {REF} {Length: 3253} {TRANSSPLICED} {Pfam: Fip1 motif [PF05182.15, score=71.5]} {Human: ENSG00000145216, FIP1L1, factor interacting with PAPOLA and CPSF1, [RH, Score=92.8, Expect=3e-19]} {Mouse: ENSMUSG00000029227, Fip1l1, FIP1 like 1 (S. cerevisiae), [RH, Score=94.4, Expect=8e-20]} {Dmel: FBgn0037255, Fip1, Factor interacting with poly(A) polymerase 1, [RH, Score=91.7, Expect=7e-19]} {Celegans: WBGene00017988, fipp-1, Factor Interacting with Poly(A) Polymerase, [RH, Score=82.4, Expect=2e-16]} {Smed: dd_Smed_v6_2560_0_1, dd_Smed_v6_2560_0_1, [RH, Score=113, Expect=2e-26]} {RNA1509_14985, RNA1509_37390} {RNA1310_12515, RNA1509_37390} {RNA1509_37390, RNA815_33587} |
| 6. | MligTC455_41176 | 2631 | 54.81 | Mlig455_049453 | Neo: - Age: Down-Down-Up |
SNAP29 | 0.97 | - | - | - | - | 0.970 | - | Mlig455_049453 {REF} {Length: 1315} {TRANSSPLICED} {Human: ENSG00000099940, SNAP29, synaptosome associated protein 29, [RH, Score=100, Expect=1e-24]} {Mouse: ENSMUSG00000022765, Snap29, synaptosomal-associated protein 29, [RH, Score=90.9, Expect=3e-21]} {Celegans: WBGene00019305, snap-29, Soluble NSF attachment protein 29, [RH, Score=85.9, Expect=2e-19]} {Smed: dd_Smed_v6_1819_0_1, dd_Smed_v6_1819_0_1, [Score=125, Expect=5e-35]} {RNA1509_16510, RNA1509_2730} {RNA1310_25746, RNA1509_16510, RNA1509_2730} {RNA1509_16510, RNA1509_2730, RNA815_5.1} |
| 7. | MligTC455_38493 | 548 | 11.42 | Mlig455_012266 | Neo: - Age: - |
SHANK3 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_012266 {REF} {Length: 7018} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=72.9]; Ankyrin repeats (3 copies) [PF12796.9, score=67.3]; Ankyrin repeats (many copies) [PF13857.8, score=60.3]; PDZ domain [PF17820.3, score=45.6]; Ankyrin repeat [PF00023.32, score=44.3]; PDZ domain [PF00595.26, score=42.4]; Ankyrin repeat [PF13606.8, score=40.4]; PDZ domain [PF13180.8, score=22.8]} {Human: ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=352, Expect=2e-98]; ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=352, Expect=2e-98]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=349, Expect=1e-97]} {Dmel: FBgn0040752, Prosap, [RH, Score=380, Expect=1e-107]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=89.4, Expect=1e-17]} {Smed: dd_Smed_v6_7862_0_1, dd_Smed_v6_7862_0_1, [RH, Score=398, Expect=2e-118]} {RNA1509_43591, RNA1509_43983} {RNA1310_4641.1, RNA1509_43591} {RNA1509_43591, RNA815_176.1} |
| 8. | MligTC455_41175 | 2525 | 52.61 | Mlig455_015746 | Neo: - Age: - |
SNAP29 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_015746 {REF} {Length: 1310} {TRANSSPLICED} {Human: ENSG00000099940, SNAP29, synaptosome associated protein 29, [RH, Score=100, Expect=1e-24]} {Mouse: ENSMUSG00000022765, Snap29, synaptosomal-associated protein 29, [RH, Score=90.9, Expect=3e-21]} {Celegans: WBGene00019305, snap-29, Soluble NSF attachment protein 29, [RH, Score=85.9, Expect=2e-19]} {Smed: dd_Smed_v6_1819_0_1, dd_Smed_v6_1819_0_1, [Score=125, Expect=5e-35]} {RNA1509_2730} {RNA1310_25746} {RNA815_5.1} |
| 9. | MligTC455_10902 | 543 | 11.31 | Mlig455_026575, Mlig455_026665, Mlig455_071099 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_026575 {REF} {Length: 3334} {RNA1509_47112} {RNA1310_88371} {RNA815_2841.2} Mlig455_026665 {REF} {Length: 3919} {Smed: dd_Smed_v6_8375_0_1, dd_Smed_v6_8375_0_1, [RH, Score=52.0, Expect=5e-07]} {RNA1509_1272} {RNA1310_88371} {RNA815_2841.2} Mlig455_071099 {REF} {Length: 2894} {RNA1509_42472, RNA1509_47112} {RNA1310_88371, RNA1509_42472} {RNA1509_42472, RNA815_2841.2} |
|
| 10. | MligTC455_47328 | 471 | 9.82 | Mlig455_025846, Mlig455_025907 | Neo: - Age: logFC(26M/2M)=0.517 |
DSTYK | 0.957 | - | - | - | - | - | 0.957 | Mlig455_025846 {REF} {Length: 3841} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=89.9]; Protein kinase domain [PF00069.27, score=81.5]; Dynamin family [PF00350.25, score=72.6]; 50S ribosome-binding GTPase [PF01926.25, score=31.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.9]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=164, Expect=9e-41]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=180, Expect=3e-46]} {Dmel: FBgn0000826, png, pan gu, [Score=70.5, Expect=1e-12]} {Celegans: WBGene00000812, csk-1, Tyrosine-protein kinase csk-1, [Score=72.0, Expect=1e-12]} {Smed: dd_Smed_v6_1371_0_1, dd_Smed_v6_1371_0_1, [Score=359, Expect=2e-109]} {RNA1509_5996} {RNA1310_2101.1} {RNA815_1774} Mlig455_025907 {REF} {Length: 3323} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=89.9]; Protein kinase domain [PF00069.27, score=81.5]; Dynamin family [PF00350.25, score=72.6]; 50S ribosome-binding GTPase [PF01926.25, score=31.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.9]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=164, Expect=9e-41]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=180, Expect=3e-46]} {Dmel: FBgn0000826, png, pan gu, [Score=70.1, Expect=1e-12]} {Celegans: WBGene00000812, csk-1, Tyrosine-protein kinase csk-1, [Score=72.0, Expect=1e-12]} {Smed: dd_Smed_v6_1371_0_1, dd_Smed_v6_1371_0_1, [Score=361, Expect=7e-110]} {RNA1509_5996} {RNA1310_2101.1} {RNA815_1774} |
| 11. | MligTC455_48376 | 429 | 8.94 | Mlig455_025352 | Neo: - Age: - Region-enriched R4: 2.225/0.00536 |
TSNAX | 0.956 | - | - | - | 0.956 | - | - | Mlig455_025352 {REF} {Length: 962} {TRANSSPLICED} {Pfam: Translin family [PF01997.18, score=139.8]} {Human: ENSG00000116918, TSNAX, translin associated factor X, [Score=145, Expect=1e-41]} {Mouse: ENSMUSG00000056820, Tsnax, translin-associated factor X, [Score=143, Expect=4e-41]} {Dmel: FBgn0038327, Trax, Translin associated factor X, [Score=120, Expect=3e-32]} {RNA1509_23172} {RNA1310_26986} {RNA815_18080} |
| 12. | MligTC455_29063 | 2689 | 56.03 | Mlig455_012009 | Neo: - Age: Down-Up-Down Regeneration-upregulated TP: 1.586 Regeneration-enriched TP: 1.586 |
LMAN2L | 0.955 | - | - | - | - | 0.955 | - | Mlig455_012009 {REF} {Length: 1404} {TRANSSPLICED} {Pfam: Legume-like lectin family [PF03388.15, score=256.8]; Bacterial lectin [PF18483.3, score=30.4]} {Human: ENSG00000114988, LMAN2L, lectin, mannose binding 2 like, [Score=238, Expect=5e-77]; ENSG00000169223, LMAN2, lectin, mannose binding 2, [Score=232, Expect=1e-74]} {Mouse: ENSMUSG00000001143, Lman2l, lectin, mannose-binding 2-like, [Score=236, Expect=3e-76]; ENSMUSG00000021484, Lman2, lectin, mannose-binding 2, [Score=228, Expect=5e-73]} {Dmel: FBgn0039160, CG5510, [Score=273, Expect=5e-91]} {Celegans: WBGene00002071, ile-2, Intracellular LEctin, [Score=265, Expect=7e-88]} {Smed: dd_Smed_v6_2066_0_1, dd_Smed_v6_2066_0_1, [Score=299, Expect=9e-102]} {RNA1509_34339, RNA1509_38944} {RNA1310_16522.1, RNA1509_38944} {RNA1509_38944, RNA815_1240.1} |
| 13. | MligTC455_17310 | 207 | 4.32 | Mlig455_045444, Mlig455_045454 | Neo: - Age: Down-Up-Down |
0.954 | - | - | - | - | - | 0.954 | Mlig455_045444 {REF} {Length: 2430} {TRANSSPLICED} {Smed: dd_Smed_v6_17523_0_1, dd_Smed_v6_17523_0_1, [Score=64.3, Expect=8e-13]} {RNA1310_22935} {RNA815_10307} Mlig455_045454 {REF} {Length: 2414} {TRANSSPLICED} {Smed: dd_Smed_v6_17523_0_1, dd_Smed_v6_17523_0_1, [Score=64.3, Expect=8e-13]} {RNA1310_22935} {RNA815_10307} |
|
| 14. | MligTC455_44826 | 649 | 13.51 | Mlig455_030807 | Neo: - |
RANBP9 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_030807 {REF} {Length: 1417} {Pfam: CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=104.3]; SPRY domain [PF00622.30, score=74.8]} {Human: ENSG00000010017, RANBP9, RAN binding protein 9, [RH, Score=309, Expect=3e-97]; ENSG00000141084, RANBP10, RAN binding protein 10, [RH, Score=297, Expect=7e-94]} {Mouse: ENSMUSG00000038546, Ranbp9, RAN binding protein 9, [RH, Score=309, Expect=1e-97]; ENSMUSG00000037415, Ranbp10, RAN binding protein 10, [RH, Score=296, Expect=2e-93]} {Dmel: FBgn0262114, RanBPM, Ran-binding protein M, [RH, Score=258, Expect=7e-76]} {Celegans: WBGene00013202, Y54E5A.7, [RH, Score=172, Expect=4e-47]} {Smed: dd_Smed_v6_8225_0_1, dd_Smed_v6_8225_0_1, [RH, Score=113, Expect=7e-27]} {RNA1509_8634} {RNA1310_7699.1} {RNA815_16561} |
| 15. | MligTC455_21851 | 665 | 13.85 | Mlig455_031575 | Neo: - Age: Down-Down-Up |
ALAD | 0.952 | - | - | - | 0.952 | - | - | Mlig455_031575 {REF} {Length: 1226} {TRANSSPLICED} {Pfam: Delta-aminolevulinic acid dehydratase [PF00490.23, score=389.9]} {Human: ENSG00000148218, ALAD, aminolevulinate dehydratase, [RH, Score=377, Expect=7e-131]} {Mouse: ENSMUSG00000028393, Alad, aminolevulinate, delta-, dehydratase, [RH, Score=369, Expect=7e-128]} {Dmel: FBgn0036271, Pbgs, Porphobilinogen synthase, [RH, Score=330, Expect=1e-112]} {Smed: dd_Smed_v6_6364_0_1, dd_Smed_v6_6364_0_1, [RH, Score=365, Expect=1e-126]} {RNA1509_20362} {RNA1310_26908} {RNA815_12467} |
| 16. | MligTC455_27016 | 266 | 5.53 | Mlig455_001514 | Neo: - Age: logFC(26M/2M)=0.472 |
ETV7 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_001514 {REF} {Length: 2693} {Pfam: Ets-domain [PF00178.24, score=65.8]} {Human: ENSG00000010030, ETV7, ETS variant 7, [Score=69.7, Expect=7e-13]; ENSG00000124664, SPDEF, SAM pointed domain containing ETS transcription factor, [Score=68.6, Expect=2e-12]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=67.8, Expect=3e-12]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=64.3, Expect=5e-11]} {Celegans: WBGene00016029, elf-1, See eff, [Score=69.3, Expect=8e-13]} {Smed: dd_Smed_v6_6015_0_1, dd_Smed_v6_6015_0_1, [Score=73.6, Expect=2e-14]} {RNA1509_54322} {RNA1310_11502} {RNA815_8770.1} |
| 17. | MligTC455_49638 | 799 | 16.64 | Mlig455_013473 | Neo: - Age: Down-Up-Down |
0.951 | - | - | - | - | - | 0.951 | Mlig455_013473 {REF} {Length: 1363} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19889, RNA1509_27962, RNA1509_48033} {RNA1310_36116, RNA1509_19889, RNA1509_27962, RNA1509_48033} {RNA1509_19889, RNA1509_27962, RNA1509_48033, RNA815_19281} | |
| 18. | MligTC455_14976 | 68 | 1.42 | Mlig455_043313 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_043313 {REF} {Length: 294} {NoTransDecoderORF} {RNA1310_68170} |
Berezikov Lab - 2020-2021 © ERIBA