TomoSeq data search

Data search

Results for MligTC455_47963

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47963	168	3.50	Mlig455_003750	Neo: - Age: -	ACADVL	Mlig455_003750 {REF} {Length: 2302} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=83.7]; Adaptive response protein AidB N-terminal domain [PF18158.3, score=52.7]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=42.1]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=30.6]} {Human: ENSG00000072778, ACADVL, acyl-CoA dehydrogenase very long chain, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000029545, Acads, acyl-Coenzyme A dehydrogenase, short chain, [Score=73.6, Expect=2e-13]} {Dmel: FBgn0038742, Arc42, [Score=73.2, Expect=1e-13]} {Celegans: WBGene00012860, acdh-11, Acyl-CoA dehydrogenase family member 11, [RH, Score=419, Expect=5e-140]} {Smed: dd_Smed_v6_4922_0_2, dd_Smed_v6_4922_0_2, [RH, Score=401, Expect=1e-133]} {RNA1509_14968} {RNA1310_10142.1} {RNA815_17966}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47963

168

3.50

Mlig455_003750

Neo: -

Age: -

ACADVL

Mlig455_003750 {REF} {Length: 2302} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=83.7]; Adaptive response protein AidB N-terminal domain [PF18158.3, score=52.7]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=42.1]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=30.6]} {Human: ENSG00000072778, ACADVL, acyl-CoA dehydrogenase very long chain, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000029545, Acads, acyl-Coenzyme A dehydrogenase, short chain, [Score=73.6, Expect=2e-13]} {Dmel: FBgn0038742, Arc42, [Score=73.2, Expect=1e-13]} {Celegans: WBGene00012860, acdh-11, Acyl-CoA dehydrogenase family member 11, [RH, Score=419, Expect=5e-140]} {Smed: dd_Smed_v6_4922_0_2, dd_Smed_v6_4922_0_2, [RH, Score=401, Expect=1e-133]} {RNA1509_14968} {RNA1310_10142.1} {RNA815_17966}

Cumulative graph for MligTC455_47963

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.729	2.598	1.00000	1.00000
RegionR2	-0.624	2.598	0.92483	1.00000
RegionR3	-0.684	2.598	0.90882	1.00000
RegionR4	1.839	2.598	0.32676	0.64460
RegionR5	1.371	2.598	0.34927	0.69859
RegionR6	0.252	2.598	0.73446	1.00000
RegionR7	1.001	2.598	0.57624	1.00000
RegionR8	-2.426	2.598	0.99990	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.652	2.598	0.99987	1.00000
RegenerationR2	1.593	2.598	0.32571	0.76381
RegenerationR3	1.645	2.598	0.42849	0.82029
RegenerationR4	0.996	2.598	0.55616	0.89508
RegenerationR5	0.711	2.598	0.76358	0.97650
RegenerationR6	0.602	2.598	0.75854	0.95612
RegenerationBL	2.478	2.598	0.28592	0.64764
RegenerationTP	2.001	2.598	0.45701	0.87243

Genes with expression patterns similar to MligTC455_47963

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47963	168	3.5	Mlig455_003750	Neo: - Age: -	ACADVL	4	1.000	-	1.000	-	1.000	1.000	Mlig455_003750 {REF} {Length: 2302} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=83.7]; Adaptive response protein AidB N-terminal domain [PF18158.3, score=52.7]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=42.1]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=30.6]} {Human: ENSG00000072778, ACADVL, acyl-CoA dehydrogenase very long chain, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000029545, Acads, acyl-Coenzyme A dehydrogenase, short chain, [Score=73.6, Expect=2e-13]} {Dmel: FBgn0038742, Arc42, [Score=73.2, Expect=1e-13]} {Celegans: WBGene00012860, acdh-11, Acyl-CoA dehydrogenase family member 11, [RH, Score=419, Expect=5e-140]} {Smed: dd_Smed_v6_4922_0_2, dd_Smed_v6_4922_0_2, [RH, Score=401, Expect=1e-133]} {RNA1509_14968} {RNA1310_10142.1} {RNA815_17966}
2.	MligTC455_35041	388	8.08	Mlig455_068533	Neo: Int S/G2/M Age: logFC(26M/2M)=1.497 Region-enriched R5: 1.244/0.03269	USP36	0.953	-	-	-	-	0.953	-	Mlig455_068533 {REF} {Length: 3918} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=171.2]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=42.1]} {Human: ENSG00000055483, USP36, ubiquitin specific peptidase 36, [Score=189, Expect=2e-49]; ENSG00000106346, USP42, ubiquitin specific peptidase 42, [Score=186, Expect=3e-48]} {Mouse: ENSMUSG00000033909, Usp36, ubiquitin specific peptidase 36, [Score=190, Expect=7e-50]; ENSMUSG00000051306, Usp42, ubiquitin specific peptidase 42, [Score=187, Expect=1e-48]} {Dmel: FBgn0260936, scny, scrawny, [Score=149, Expect=7e-37]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=139, Expect=6e-34]} {Smed: dd_Smed_v6_7150_0_4, dd_Smed_v6_7150_0_4, [Score=142, Expect=1e-35]} {RNA1509_46076} {RNA1310_7510} {RNA815_2440}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_47963

168

3.5

Mlig455_003750

Neo: -

Age: -

ACADVL

1.000

MligTC455_35041

388

8.08

Mlig455_068533

Neo: Int S/G2/M

Age: logFC(26M/2M)=1.497

Region-enriched R5: 1.244/0.03269

USP36

0.953

Mlig455_068533 {REF} {Length: 3918} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=171.2]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=42.1]} {Human: ENSG00000055483, USP36, ubiquitin specific peptidase 36, [Score=189, Expect=2e-49]; ENSG00000106346, USP42, ubiquitin specific peptidase 42, [Score=186, Expect=3e-48]} {Mouse: ENSMUSG00000033909, Usp36, ubiquitin specific peptidase 36, [Score=190, Expect=7e-50]; ENSMUSG00000051306, Usp42, ubiquitin specific peptidase 42, [Score=187, Expect=1e-48]} {Dmel: FBgn0260936, scny, scrawny, [Score=149, Expect=7e-37]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=139, Expect=6e-34]} {Smed: dd_Smed_v6_7150_0_4, dd_Smed_v6_7150_0_4, [Score=142, Expect=1e-35]} {RNA1509_46076} {RNA1310_7510} {RNA815_2440}