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Results for MligTC455_48020

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48020 125 2.61 Mlig455_009782

Neo: -

Age: logFC(26M/2M)=0.422

 BEST4 Mlig455_009782 {REF} {Length: 3049} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=171.4]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=95.5, Expect=3e-20]; ENSG00000167995, BEST1, bestrophin 1, [Score=94.4, Expect=1e-19]; ENSG00000127325, BEST3, bestrophin 3, [Score=93.6, Expect=3e-19]; ENSG00000039987, BEST2, bestrophin 2, [Score=92.4, Expect=3e-19]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [Score=91.3, Expect=8e-19]; ENSMUSG00000052819, Best2, bestrophin 2, [Score=88.2, Expect=5e-18]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=186, Expect=1e-50]} {Celegans: WBGene00014989, best-23, Bestrophin homolog, [Score=139, Expect=5e-36]} {Smed: dd_Smed_v6_11440_0_1, dd_Smed_v6_11440_0_1, [RH, Score=282, Expect=4e-89]} {RNA1509_40683} {RNA1310_12196.1} {RNA815_2424}

Cumulative graph for MligTC455_48020

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.949 2.178 0.18820 0.82082
RegionR2 1.475 2.178 0.22092 0.58980
RegionR3 0.668 2.178 0.53025 1.00000
RegionR4 0.198 2.178 0.79219 1.00000
RegionR5 0.762 2.178 0.45002 0.81158
RegionR6 1.965 2.178 0.03349 0.34083
RegionR7 0.425 2.178 0.70632 1.00000
RegionR8 0.456 2.178 0.70926 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.394 2.178 0.99985 1.00000
RegenerationR2 -0.314 2.178 0.70581 0.95820
RegenerationR3 0.64 2.178 0.47943 0.84952
RegenerationR4 1.122 2.178 0.24747 0.69561
RegenerationR5 0.555 2.178 0.48637 0.85036
RegenerationR6 -1.525 2.178 0.13288 0.44746
RegenerationBL -0.111 2.178 0.92676 1.00000
RegenerationTP 1.795 2.178 0.08950 0.47121


Genes with expression patterns similar to MligTC455_48020

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48020 125 2.61 Mlig455_009782

Neo: -

Age: logFC(26M/2M)=0.422

 BEST4 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_009782 {REF} {Length: 3049} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=171.4]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=95.5, Expect=3e-20]; ENSG00000167995, BEST1, bestrophin 1, [Score=94.4, Expect=1e-19]; ENSG00000127325, BEST3, bestrophin 3, [Score=93.6, Expect=3e-19]; ENSG00000039987, BEST2, bestrophin 2, [Score=92.4, Expect=3e-19]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [Score=91.3, Expect=8e-19]; ENSMUSG00000052819, Best2, bestrophin 2, [Score=88.2, Expect=5e-18]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=186, Expect=1e-50]} {Celegans: WBGene00014989, best-23, Bestrophin homolog, [Score=139, Expect=5e-36]} {Smed: dd_Smed_v6_11440_0_1, dd_Smed_v6_11440_0_1, [RH, Score=282, Expect=4e-89]} {RNA1509_40683} {RNA1310_12196.1} {RNA815_2424}
2. MligTC455_49936 134 2.79 Mlig455_025477, Mlig455_033596

Neo: -

Age: Down-Up-Down

Region-enriched R3: 2.907/0.03091

 2.413 - - - 0.746 0.954 0.713

Mlig455_025477 {REF} {Length: 934} {RNA1310_65296} {RNA815_34444}

Mlig455_033596 {REF} {Length: 936} {RNA1310_65296} {RNA815_34444}
3. MligTC455_34240 98 2.04 Mlig455_067901

Neo: -

Age: logFC(26M/2M)=-0.482

 1.769 - - 0.950 - 0.819 - Mlig455_067901 {REF} {Length: 2932} {RNA1310_22409} {RNA815_36119}
4. MligTC455_51708 688 14.33 Mlig455_038449

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.006/0.01700

 POLR3K 0.98 - - - - 0.980 - Mlig455_038449 {REF} {Length: 438} {TRANSSPLICED} {Pfam: Transcription factor S-II (TFIIS) [PF01096.20, score=62.0]; RNA polymerases M/15 Kd subunit [PF02150.18, score=27.0]; Nudix N-terminal [PF14803.8, score=18.9]; Transposase zinc-ribbon domain [PF12760.9, score=18.5]} {Human: ENSG00000161980, POLR3K, RNA polymerase III subunit K, [RH, Score=133, Expect=2e-41]} {Mouse: ENSMUSG00000038628, Polr3k, polymerase (RNA) III (DNA directed) polypeptide K, [RH, Score=132, Expect=2e-41]} {Dmel: FBgn0061362, CG33785, [RH, Score=117, Expect=1e-35]} {Celegans: WBGene00022309, rpc-11, DNA-directed RNA polymerase subunit, [RH, Score=122, Expect=9e-38]} {Smed: dd_Smed_v6_5337_0_1, dd_Smed_v6_5337_0_1, [RH, Score=71.6, Expect=1e-17]} {RNA1509_20847, RNA1509_35360} {RNA1310_49768.2, RNA1509_20847, RNA1509_35360} {RNA1509_20847, RNA1509_35360, RNA815_35455.1}
5. MligTC455_23254 56 1.16 Mlig455_020486

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_020486 {REF} {Length: 1473} {TRANSSPLICED} {RNA1310_31763} {RNA815_30486}
6. MligTC455_45041 96 2 Mlig455_015334

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.860/0.02299

 FANCI 0.961 - - - 0.961 - - Mlig455_015334 {REF} {Length: 6061} {TRANSSPLICED} {Pfam: FANCI solenoid 4 [PF14678.8, score=99.8]; FANCI solenoid 2 [PF14676.8, score=87.0]; FANCI helical domain 2 [PF14680.8, score=79.4]; FANCI solenoid 1 [PF14675.8, score=67.6]; FANCI helical domain 1 [PF14679.8, score=26.8]} {Human: ENSG00000140525, FANCI, FA complementation group I, [RH, Score=170, Expect=7e-42]} {Mouse: ENSMUSG00000039187, Fanci, Fanconi anemia, complementation group I, [RH, Score=191, Expect=2e-48]} {Smed: dd_Smed_v6_8024_0_1, dd_Smed_v6_8024_0_1, [Score=60.1, Expect=1e-08]} {RNA1509_14043} {RNA1310_3141} {RNA815_12076}
7. MligTC455_49415 124 2.58 Mlig455_065684

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.124

 ABCA5 0.961 - - - 0.961 - - Mlig455_065684 {REF} {Length: 6415} {Pfam: ABC transporter [PF00005.29, score=169.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=88.6]; ABC-2 family transporter protein [PF12698.9, score=45.0]; RecF/RecN/SMC N terminal domain [PF02463.21, score=37.6]; AAA domain [PF13476.8, score=32.8]; RsgA GTPase [PF03193.18, score=31.9]; AAA ATPase domain [PF13175.8, score=30.7]; P-loop containing region of AAA domain [PF13555.8, score=26.2]; AAA domain [PF13401.8, score=25.0]; 50S ribosome-binding GTPase [PF01926.25, score=24.9]; AAA domain [PF13604.8, score=23.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.7]; AAA ATPase domain [PF13191.8, score=21.7]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=21.3]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=21.0]; Domain of unknown function (DUF4162) [PF13732.8, score=20.9]; AAA domain [PF13671.8, score=20.3]; Double-GTPase 2 [PF19993.1, score=18.9]; Molybdopterin guanine dinucleotide synthesis protein B [PF03205.16, score=18.5]} {Human: ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=227, Expect=3e-59]; ENSG00000144452, ABCA12, ATP binding cassette subfamily A member 12, [Score=225, Expect=2e-58]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=223, Expect=4e-58]; ENSG00000179869, ABCA13, ATP binding cassette subfamily A member 13, [Score=219, Expect=2e-58]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=228, Expect=1e-59]; ENSMUSG00000041797, Abca9, ATP-binding cassette, sub-family A (ABC1), member 9, [Score=224, Expect=2e-58]; ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=223, Expect=3e-58]; ENSMUSG00000050296, Abca12, ATP-binding cassette, sub-family A (ABC1), member 12, [Score=221, Expect=4e-57]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=218, Expect=1e-56]} {Dmel: FBgn0031170, CG1718, [Score=196, Expect=4e-50]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=214, Expect=2e-55]} {Smed: dd_Smed_v6_2300_0_8, dd_Smed_v6_2300_0_8, [Score=221, Expect=5e-58]} {RNA1509_6118} {RNA1310_1067, RNA1509_6118} {RNA1509_6118, RNA815_435}
8. MligTC455_07672 31 0.65 Mlig455_046827

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_046827 {REF} {Length: 804} {NoTransDecoderORF}
9. MligTC455_38164 13 0.27 Mlig455_027447, Mlig455_027450, Mlig455_050652, Mlig455_050712

Neo: -

Age: Up-Down-Down

 PKD2L1, PKDREJ 0.958 - - - - 0.958 -

Mlig455_027447 {REF} {Length: 3023} {Pfam: Polycystin cation channel [PF08016.14, score=77.8]; Lectin C-type domain [PF00059.23, score=31.1]} {Human: ENSG00000107593, PKD2L1, polycystin 2 like 1, transient receptor potential cation channel, [Score=69.3, Expect=3e-11]} {Mouse: ENSMUSG00000037578, Pkd2l1, polycystic kidney disease 2-like 1, [Score=70.5, Expect=8e-12]} {Dmel: FBgn0040333, brv3, brivido-3, [Score=50.1, Expect=9e-06]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=54.3, Expect=5e-07]} {Smed: dd_Smed_v6_9977_0_3, dd_Smed_v6_9977_0_3, [Score=66.2, Expect=4e-11]} {RNA1509_36495} {RNA1310_23140.1} {RNA815_29106}

Mlig455_027450 {REF} {Length: 6767} {Pfam: REJ domain [PF02010.17, score=79.6]} {RNA1509_36495} {RNA1310_14058} {RNA815_29482}

Mlig455_050652 {REF} {Length: 10436} {Pfam: Polycystin cation channel [PF08016.14, score=86.6]; Lectin C-type domain [PF00059.23, score=31.0]; Helix-turn-helix domain [PF13936.8, score=22.0]; Homeodomain-like domain [PF13384.8, score=19.0]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=80.1, Expect=4e-14]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=119, Expect=3e-26]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=78.6, Expect=5e-14]} {Smed: dd_Smed_v6_13975_0_1, dd_Smed_v6_13975_0_1, [Score=170, Expect=3e-42]} {RNA1509_36495} {RNA1310_14058} {RNA815_29482}

Mlig455_050712 {REF} {Length: 3654} {Pfam: REJ domain [PF02010.17, score=74.4]} {RNA1509_58823} {RNA1310_41476} {RNA815_46213}
10. MligTC455_41265 70 1.45 Mlig455_049891

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.562

 ABR 0.958 - - 0.958 - - - Mlig455_049891 {REF} {Length: 5643} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=108.9]; PH domain [PF19057.2, score=25.6]} {Human: ENSG00000159842, ABR, ABR, RhoGEF and GTPase activating protein, [Score=172, Expect=3e-43]; ENSG00000278741, ABR, ABR, RhoGEF and GTPase activating protein, [Score=172, Expect=3e-43]; ENSG00000276016, ABR, ABR, RhoGEF and GTPase activating protein, [Score=170, Expect=6e-43]} {Mouse: ENSMUSG00000017631, Abr, active BCR-related gene, [Score=171, Expect=5e-43]} {Dmel: FBgn0025836, RhoGAP1A, Rho GTPase activating protein at 1A, [Score=190, Expect=7e-49]} {Celegans: WBGene00008006, tag-325, WW domain-containing protein tag-325, [Score=87.8, Expect=3e-17]} {Smed: dd_Smed_v6_4507_0_2, dd_Smed_v6_4507_0_2, [Score=149, Expect=2e-36]} {RNA1509_19212} {RNA1310_6725} {RNA815_6903.1}
11. MligTC455_08794 15 0.31 Mlig455_055241

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_055241 {REF} {Length: 292} {NoTransDecoderORF} {RNA1509_55672} {RNA1310_142492} {RNA815_57567}
12. MligTC455_27101 98 2.04 Mlig455_030183

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.419

 URGCP 0.953 - - - - 0.953 - Mlig455_030183 {REF} {Length: 5914} {Pfam: Mediator complex subunit 25 von Willebrand factor type A [PF11265.10, score=24.4]; Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=24.3]; Dynamin family [PF00350.25, score=21.9]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=20.4]; 50S ribosome-binding GTPase [PF01926.25, score=20.1]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=124, Expect=6e-28]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=402, Expect=4e-115]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=400, Expect=2e-114]} {RNA1509_16396} {RNA1310_766.1} {RNA815_2094.1}
13. MligTC455_19096 120 2.51 Mlig455_034495, Mlig455_066247

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.298

Region-enriched R4: 4.299/0.00004

 0.951 - - - 0.951 - -

Mlig455_034495 {REF} {Length: 2182} {NoTransDecoderORF} {RNA1509_28602} {RNA1310_14384, RNA1509_28602} {RNA1509_28602, RNA815_9416}

Mlig455_066247 {REF} {Length: 3738} {RNA1509_28602} {RNA1310_14384} {RNA815_9416}
14. MligTC455_22143 142 2.96 Mlig455_002061, Mlig455_016676, Mlig455_031406, Mlig455_036965, Mlig455_038899, Mlig455_051843, Mlig455_059637

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_002061 {REF} {Length: 903} {Pfam: DDE superfamily endonuclease [PF13358.8, score=20.1]} {RNA1509_22932} {RNA1310_19377.1} {RNA815_224.1}

Mlig455_016676 {REF} {Length: 422} {RNA1310_19377.2} {RNA815_224.1}

Mlig455_031406 {REF} {Length: 756} {Pfam: DDE superfamily endonuclease [PF13358.8, score=19.4]} {RNA1509_22932} {RNA1310_19377.1} {RNA815_224.1}

Mlig455_036965 {REF} {Length: 711} {Pfam: DDE superfamily endonuclease [PF13358.8, score=19.7]} {RNA1509_45750} {RNA1310_19377.1} {RNA815_224.1}

Mlig455_038899 {REF} {Length: 1056} {Pfam: DDE superfamily endonuclease [PF13358.8, score=19.8]} {RNA1509_22932} {RNA1310_19377.1} {RNA815_224.1}

Mlig455_051843 {REF} {Length: 795} {NoTransDecoderORF} {RNA1509_57429} {RNA1310_73907} {RNA815_44596}

Mlig455_059637 {REF} {Length: 450} {Pfam: DDE superfamily endonuclease [PF13358.8, score=19.9]} {RNA1310_19377.1} {RNA815_224.1}

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