M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_48081

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48081 31 0.64 Mlig455_070436

Neo: Irradiation

Age: -

 Mlig455_070436 {REF} {Length: 3835} {TRANSSPLICED} {RNA1509_13795, RNA1509_55797} {RNA1310_2982, RNA1509_13795, RNA1509_55797} {RNA1509_13795, RNA1509_55797, RNA815_22561}

Cumulative graph for MligTC455_48081

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.617 1.051 1.00000 1.00000
RegionR2 1.4 1.051 1.00000 1.00000
RegionR3 -0.073 1.051 1.00000 1.00000
RegionR4 -1.193 1.051 0.99952 1.00000
RegionR5 -0.561 1.051 0.99948 1.00000
RegionR6 0.072 1.051 1.00000 1.00000
RegionR7 0.464 1.051 0.99948 1.00000
RegionR8 0.508 1.051 0.99985 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.931 1.051 0.99954 1.00000
RegenerationR2 4.957 1.051 0.02997 0.28462
RegenerationR3 4.87 1.051 0.03490 0.33137
RegenerationR4 4.318 1.051 0.03886 0.31793
RegenerationR5 5.837 1.051 0.01807 0.23343
RegenerationR6 4.472 1.051 0.04400 0.26226
RegenerationBL 0.964 1.051 0.99957 1.00000
RegenerationTP 2.715 1.051 0.13545 0.55257


Genes with expression patterns similar to MligTC455_48081

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48081 31 0.64 Mlig455_070436

Neo: Irradiation

Age: -

 2 - - - - 1.000 1.000 Mlig455_070436 {REF} {Length: 3835} {TRANSSPLICED} {RNA1509_13795, RNA1509_55797} {RNA1310_2982, RNA1509_13795, RNA1509_55797} {RNA1509_13795, RNA1509_55797, RNA815_22561}
2. MligTC455_18160 199 4.14 Mlig455_005036, Mlig455_005076, Mlig455_005237

Neo: -

Age: logFC(26M/2M)=0.400

 MARCH7 1.734 - - - - 0.955 0.779

Mlig455_005036 {REF} {Length: 1948} {Pfam: RING-variant domain [PF12906.9, score=51.3]} {Human: ENSG00000136536, MARCH7, membrane associated ring-CH-type finger 7, [Score=52.4, Expect=9e-08]} {Mouse: ENSMUSG00000026977, March7, membrane-associated ring finger (C3HC4) 7, [Score=52.8, Expect=6e-08]} {Dmel: FBgn0031474, CG2991, [Score=47.8, Expect=2e-06]} {Celegans: WBGene00016903, marc-4, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=58.2, Expect=2e-10]} {Smed: dd_Smed_v6_7654_0_1, dd_Smed_v6_7654_0_1, [Score=51.6, Expect=5e-08]} {RNA1509_48933} {RNA1310_49370} {RNA815_36043}

Mlig455_005076 {REF} {Length: 1947} {Pfam: RING-variant domain [PF12906.9, score=49.8]} {Human: ENSG00000136536, MARCH7, membrane associated ring-CH-type finger 7, [Score=50.8, Expect=3e-07]} {Mouse: ENSMUSG00000026977, March7, membrane-associated ring finger (C3HC4) 7, [Score=51.2, Expect=2e-07]} {Dmel: FBgn0031474, CG2991, [Score=46.6, Expect=4e-06]} {Celegans: WBGene00016903, marc-4, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=57.4, Expect=4e-10]} {Smed: dd_Smed_v6_7654_0_1, dd_Smed_v6_7654_0_1, [Score=52.0, Expect=4e-08]} {RNA1509_48933} {RNA1310_49370} {RNA815_36043}

Mlig455_005237 {REF} {Length: 1944} {Pfam: RING-variant domain [PF12906.9, score=50.7]} {Human: ENSG00000136536, MARCH7, membrane associated ring-CH-type finger 7, [Score=51.2, Expect=3e-07]} {Mouse: ENSMUSG00000026977, March7, membrane-associated ring finger (C3HC4) 7, [Score=51.2, Expect=2e-07]} {Dmel: FBgn0031474, CG2991, [Score=47.0, Expect=3e-06]} {Celegans: WBGene00016903, marc-4, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=57.0, Expect=5e-10]} {Smed: dd_Smed_v6_7654_0_1, dd_Smed_v6_7654_0_1, [Score=50.1, Expect=1e-07]} {RNA1509_48933} {RNA1310_49370} {RNA815_36043}
3. MligTC455_38122 107 2.23 Mlig455_039869

Neo: -

Age: Down-Up-Down

 TNN 0.995 - - - - 0.995 - Mlig455_039869 {REF} {Length: 4421} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=106.6]} {Human: ENSG00000120332, TNN, tenascin N, [Score=88.2, Expect=2e-18]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=86.3, Expect=6e-18]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=84.0, Expect=2e-17]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=84.0, Expect=2e-17]} {Dmel: FBgn0051832, CG31832, [Score=86.3, Expect=2e-19]} {RNA1509_55606} {RNA1310_38579} {RNA815_30371}
4. MligTC455_27709 127 2.64 Mlig455_002862

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_002862 {REF} {Length: 3278} {TRANSSPLICED} {RNA1509_44695} {RNA1310_12605, RNA1509_44695} {RNA1509_44695, RNA815_5670}
5. MligTC455_42767 400 8.33 Mlig455_004395

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_004395 {REF} {Length: 1795} {Pfam: Domain of unknown function (DUF4200) [PF13863.8, score=61.8]} {Mouse: ENSMUSG00000045915, Ccdc42, coiled-coil domain containing 42, [Score=60.5, Expect=7e-10]} {Smed: dd_Smed_v6_11371_0_1, dd_Smed_v6_11371_0_1, [Score=172, Expect=1e-50]} {RNA1509_10321} {RNA1310_4632.2} {RNA815_1307.1}
6. MligTC455_42768 409 8.53 Mlig455_037216

Neo: -

Age: logFC(26M/2M)=-0.243

 0.97 - - - - 0.970 - Mlig455_037216 {REF} {Length: 1847} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4200) [PF13863.8, score=77.0]} {Mouse: ENSMUSG00000045915, Ccdc42, coiled-coil domain containing 42, [Score=63.9, Expect=5e-11]} {Smed: dd_Smed_v6_11371_0_1, dd_Smed_v6_11371_0_1, [RH, Score=224, Expect=2e-70]} {RNA1509_10321, RNA1509_16488, RNA1509_46472, RNA1509_54585, RNA1509_55496} {RNA1310_4632.2, RNA1509_10321, RNA1509_16488, RNA1509_46472, RNA1509_54585, RNA1509_55496} {RNA1509_10321, RNA1509_16488, RNA1509_46472, RNA1509_54585, RNA1509_55496, RNA815_1307.1}
7. MligTC455_21755 70 1.47 Mlig455_021213

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_021213 {REF} {Length: 4215} {Pfam: F5/8 type C domain [PF00754.27, score=55.5]} {RNA1509_2515} {RNA1310_33166} {RNA815_14716}
8. MligTC455_12445 32 0.67 Mlig455_044145

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_044145 {REF} {Length: 1958} {RNA1509_44592} {RNA1310_51055} {RNA815_62885}
9. MligTC455_37632 88 1.82 Mlig455_007642

Neo: -

Age: Down-Down-Down

 0.962 - - - - 0.962 - Mlig455_007642 {REF} {Length: 1745} {TRANSSPLICED} {Mouse: ENSMUSG00000043183, Simc1, SUMO-interacting motifs containing 1, [Score=48.5, Expect=2e-06]} {Dmel: FBgn0029697, CG15570, [Score=47.8, Expect=3e-06]} {RNA1310_31748.1} {RNA815_30609}
10. MligTC455_00831 642 13.37 Mlig455_016457, Mlig455_016523

Neo: -

Age: logFC(26M/2M)=0.506

 LGR5 0.959 - - - - 0.959 -

Mlig455_016457 {REF} {Length: 4347} {Pfam: Leucine rich repeat [PF13855.8, score=86.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=45.8]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=40.5]} {Human: ENSG00000139292, LGR5, leucine rich repeat containing G protein-coupled receptor 5, [Score=58.5, Expect=7e-08]; ENSG00000145147, SLIT2, slit guidance ligand 2, [Score=57.0, Expect=2e-07]} {Mouse: ENSMUSG00000020140, Lgr5, leucine rich repeat containing G protein coupled receptor 5, [Score=59.7, Expect=2e-08]} {Dmel: FBgn0267435, chp, chaoptin, [Score=67.0, Expect=8e-11]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=55.8, Expect=2e-07]} {RNA1509_8817} {RNA1310_2409} {RNA815_590.1}

Mlig455_016523 {REF} {Length: 3360} {Pfam: Leucine rich repeat [PF13855.8, score=41.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=39.1]} {RNA1509_8817} {RNA1310_22547} {RNA815_590.1}
11. MligTC455_42746 483 10.06 Mlig455_040721

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.368

 ACSF2 0.959 - - - - 0.959 - Mlig455_040721 {REF} {Length: 3197} {Pfam: AMP-binding enzyme [PF00501.30, score=314.2]; AMP-binding enzyme C-terminal domain [PF13193.8, score=37.2]} {Human: ENSG00000167107, ACSF2, acyl-CoA synthetase family member 2, [Score=147, Expect=1e-37]} {Mouse: ENSMUSG00000076435, Acsf2, acyl-CoA synthetase family member 2, [Score=156, Expect=8e-41]} {Dmel: FBgn0027601, pdgy, pudgy, [Score=269, Expect=8e-83]} {Celegans: WBGene00008669, acs-14, Fatty Acid CoA Synthetase family, [Score=259, Expect=1e-79]} {Smed: dd_Smed_v6_10135_0_1, dd_Smed_v6_10135_0_1, [Score=317, Expect=5e-102]} {RNA1509_22715} {RNA1310_10057.2} {RNA815_14069}
12. MligTC455_36004 270 5.62 Mlig455_026689

Neo: -

Age: Up-Down-Down

 DNAH14 0.958 - - - - 0.958 - Mlig455_026689 {REF} {Length: 15335} {TRANSSPLICED} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=478.8]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=413.2]; P-loop containing dynein motor region D4 [PF12780.9, score=291.1]; Dynein heavy chain C-terminal domain [PF18199.3, score=250.1]; ATP-binding dynein motor region [PF12781.9, score=229.2]; P-loop containing dynein motor region [PF12775.9, score=203.3]; Microtubule-binding stalk of dynein motor [PF12777.9, score=125.1]; Dynein heavy chain AAA lid domain [PF18198.3, score=122.1]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=113.2]; Dynein heavy chain AAA lid domain [PF17852.3, score=84.3]; AAA ATPase domain [PF13191.8, score=52.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=51.6]; AAA domain [PF13401.8, score=48.7]; AAA+ lid domain [PF17857.3, score=46.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=45.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=24.3]; AAA domain [PF13238.8, score=22.5]; NACHT domain [PF05729.14, score=20.6]; AAA domain [PF13671.8, score=20.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=19.6]; Protein of unknown function (DUF815) [PF05673.15, score=17.7]} {Human: ENSG00000185842, DNAH14, dynein axonemal heavy chain 14, [RH, Score=1709, Expect=0.0]} {Mouse: ENSMUSG00000052861, Dnah6, dynein, axonemal, heavy chain 6, [Score=1547, Expect=0.0]} {Dmel: FBgn0283476, Dhc16F, Dynein heavy chain at 16F, [Score=1206, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=617, Expect=6e-177]} {Smed: dd_Smed_v6_10969_0_1, dd_Smed_v6_10969_0_1, [RH, Score=2929, Expect=0.0]} {RNA1509_3937} {RNA1310_38.1} {RNA815_142}
13. MligTC455_23329 313 6.52 Mlig455_067574

Neo: -

Age: Down-Up-Down

 RWDD1 0.957 - - - - 0.957 - Mlig455_067574 {REF} {Length: 2911} {Pfam: RWD domain [PF05773.24, score=75.6]} {Human: ENSG00000111832, RWDD1, RWD domain containing 1, [Score=88.2, Expect=4e-21]} {Mouse: ENSMUSG00000019782, Rwdd1, RWD domain containing 1, [Score=87.4, Expect=6e-21]} {Dmel: FBgn0039163, CG5515, [Score=66.2, Expect=3e-13]} {Celegans: WBGene00013591, gcn-2, Eukaryotic translation initiation factor 2-alpha kinase gcn-2, [Score=45.1, Expect=1e-05]} {Smed: dd_Smed_v6_8892_0_1, dd_Smed_v6_8892_0_1, [Score=46.6, Expect=2e-06]} {RNA1509_11829, RNA1509_44892} {RNA1310_16178.1, RNA1509_44892} {RNA1509_44892, RNA815_18505}
14. MligTC455_44109 93 1.95 Mlig455_032771

Neo: -

Age: -

Region-enriched R4: 5.333/0.01818

 0.956 - - - - 0.956 - Mlig455_032771 {REF} {Length: 529} {TRANSSPLICED} {RNA1310_42676} {RNA815_26592}
15. MligTC455_47146 157 3.28 Mlig455_053968

Neo: -

Age: logFC(26M/2M)=-0.429

Region-enriched R4: 3.868/0.00961

 TTC24 0.956 - - - - 0.956 - Mlig455_053968 {REF} {Length: 4078} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=74.2]; Tetratricopeptide repeat [PF07719.19, score=57.5]; Tetratricopeptide repeat [PF00515.30, score=50.0]; Tetratricopeptide repeat [PF13176.8, score=49.3]; Tetratricopeptide repeat [PF13181.8, score=31.7]} {Human: ENSG00000187862, TTC24, tetratricopeptide repeat domain 24, [RH, Score=103, Expect=3e-22]} {Mouse: ENSMUSG00000051036, Ttc24, tetratricopeptide repeat domain 24, [RH, Score=67.8, Expect=1e-11]} {RNA1509_7768} {RNA1310_13043} {RNA815_789.1}
16. MligTC455_51744 87 1.82 Mlig455_008026

Neo: -

Age: -

 FOXJ3 0.956 - - - - 0.956 - Mlig455_008026 {REF} {Length: 3805} {Pfam: Forkhead domain [PF00250.20, score=126.3]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [RH, Score=165, Expect=3e-46]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [RH, Score=163, Expect=4e-44]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=118, Expect=8e-29]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=115, Expect=4e-29]} {Smed: dd_Smed_v6_12170_0_1, dd_Smed_v6_12170_0_1, [RH, Score=112, Expect=2e-26]} {RNA1509_19637} {RNA1310_12207} {RNA815_17037}
17. MligTC455_41370 20 0.42 Mlig455_056405

Neo: -

Age: Down-Down-Down

 0.955 - - - - 0.955 - Mlig455_056405 {REF} {Length: 1277} {RNA1509_56938} {RNA1310_28841.1} {RNA815_53904}
18. MligTC455_49506 29 0.6 Mlig455_054978

Neo: -

Age: Up-Down-Down

 EGR1 0.955 - - - - 0.955 - Mlig455_054978 {REF} {Length: 2310} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=53.0]; Zinc-finger double domain [PF13465.8, score=45.5]; C2H2-type zinc finger [PF13894.8, score=40.2]; C2H2-type zinc finger [PF13912.8, score=23.5]} {Human: ENSG00000120738, EGR1, early growth response 1, [Score=90.1, Expect=5e-20]; ENSG00000124613, ZNF391, zinc finger protein 391, [Score=89.0, Expect=6e-20]; ENSG00000272602, ZNF595, zinc finger protein 595, [Score=88.6, Expect=2e-19]; ENSG00000131845, ZNF304, zinc finger protein 304, [Score=88.6, Expect=2e-19]; ENSG00000179388, EGR3, early growth response 3, [Score=87.4, Expect=3e-19]; ENSG00000188283, ZNF383, zinc finger protein 383, [Score=87.0, Expect=5e-19]; ENSG00000197608, ZNF841, zinc finger protein 841, [Score=87.0, Expect=6e-19]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=87.0, Expect=6e-19]; ENSG00000235109, ZSCAN31, zinc finger and SCAN domain containing 31, [Score=86.7, Expect=5e-19]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=86.7, Expect=1e-18]; ENSG00000122877, EGR2, early growth response 2, [Score=86.3, Expect=9e-19]; ENSG00000196172, ZNF681, zinc finger protein 681, [Score=86.3, Expect=1e-18]; ENSG00000167384, ZNF180, zinc finger protein 180, [Score=86.3, Expect=1e-18]} {Mouse: ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=92.0, Expect=2e-21]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=91.7, Expect=1e-20]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=91.3, Expect=1e-20]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=91.3, Expect=1e-20]; ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=90.9, Expect=2e-20]; ENSMUSG00000038418, Egr1, early growth response 1, [Score=90.1, Expect=3e-20]; ENSMUSG00000078869, Gm14409, predicted gene 14409, [Score=88.2, Expect=7e-20]; ENSMUSG00000078872, Gm14401, predicted gene 14401, [Score=88.2, Expect=4e-20]} {Dmel: FBgn0013469, klu, klumpfuss, [Score=113, Expect=3e-28]} {Celegans: WBGene00013970, klu-1, KLUmpfuss related, [Score=109, Expect=4e-27]} {Smed: dd_Smed_v6_16277_0_1, dd_Smed_v6_16277_0_1, [Score=112, Expect=4e-29]} {RNA1310_32154} {RNA815_27227}
19. MligTC455_25141 295 6.14 Mlig455_034688

Neo: Irradiation

Age: -

 RHBDF1 0.953 - - - - - 0.953 Mlig455_034688 {REF} {Length: 4284} {Pfam: Rhomboid family [PF01694.24, score=68.6]} {Human: ENSG00000007384, RHBDF1, rhomboid 5 homolog 1, [RH, Score=373, Expect=2e-114]} {Mouse: ENSMUSG00000020282, Rhbdf1, rhomboid 5 homolog 1, [RH, Score=375, Expect=2e-115]} {Dmel: FBgn0041723, rho-5, rhomboid-5, [RH, Score=331, Expect=1e-95]} {Celegans: WBGene00004402, rom-3, RhOMboid (Drosophila) related, [RH, Score=306, Expect=4e-90]} {Smed: dd_Smed_v6_11534_0_2, dd_Smed_v6_11534_0_2, [RH, Score=422, Expect=4e-135]} {RNA1509_11104, RNA1509_30344, RNA1509_41961} {RNA1310_659, RNA1509_11104, RNA1509_30344, RNA1509_41961} {RNA1509_11104, RNA1509_30344, RNA1509_41961, RNA815_7306}
20. MligTC455_35536 441 9.18 Mlig455_035025

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.417

 ACSF2 0.953 - - - - 0.953 - Mlig455_035025 {REF} {Length: 2465} {Pfam: AMP-binding enzyme [PF00501.30, score=347.8]; AMP-binding enzyme C-terminal domain [PF13193.8, score=65.1]} {Human: ENSG00000167107, ACSF2, acyl-CoA synthetase family member 2, [RH, Score=538, Expect=0.0]} {Mouse: ENSMUSG00000076435, Acsf2, acyl-CoA synthetase family member 2, [RH, Score=553, Expect=0.0]} {Dmel: FBgn0031703, CG12512, [RH, Score=469, Expect=3e-158]} {Celegans: WBGene00018488, acs-1, Fatty Acid CoA Synthetase family, [RH, Score=567, Expect=0.0]} {Smed: dd_Smed_v6_10135_0_1, dd_Smed_v6_10135_0_1, [Score=175, Expect=2e-47]} {RNA1509_13785, RNA1509_18209, RNA1509_36737} {RNA1310_8993.1, RNA1509_13785, RNA1509_18209, RNA1509_36737} {RNA1509_13785, RNA1509_18209, RNA1509_36737, RNA815_3019}
21. MligTC455_10249 19 0.41 Mlig455_012726

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_012726 {REF} {Length: 892} {NoTransDecoderORF} {RNA1509_2860} {RNA1310_58348} {RNA815_55323}
22. MligTC455_14765 26 0.54 Mlig455_042350

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_042350 {REF} {Length: 1326} {RNA1509_8414} {RNA1310_791.2} {RNA815_23426}
23. MligTC455_03474 141 2.93 Mlig455_056887

Neo: -

Age: -

Region-enriched R5: 3.267/0.00391

 0.951 - - - - - 0.951 Mlig455_056887 {REF} {Length: 764} {Pfam: Protealysin propeptide [PF16485.7, score=22.9]; Carbohydrate binding domain (family 19) [PF03427.15, score=22.2]; Zinc finger, ZZ type [PF00569.19, score=19.6]} {RNA1509_39801} {RNA1310_107778} {RNA815_62924}
24. MligTC455_28256 415 8.65 Mlig455_061737

Neo: Irradiation

Age: logFC(26M/2M)=-0.538

Region-enriched R5: 2.541/0.00000

 MAP3K19 0.951 - - - - - 0.951 Mlig455_061737 {REF} {Length: 4950} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=182.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.5]; Ankyrin repeats (3 copies) [PF12796.9, score=120.5]; Ankyrin repeats (many copies) [PF13637.8, score=77.9]; Ankyrin repeats (many copies) [PF13857.8, score=53.3]; Ankyrin repeat [PF00023.32, score=47.7]; Ankyrin repeat [PF13606.8, score=46.5]; ABC1 atypical kinase-like domain [PF03109.18, score=32.8]; Ankyrin ubiquitin-binding domain [PF18418.3, score=26.2]; Fungal protein kinase [PF17667.3, score=24.3]; Family of unknown function (DUF6189) [PF19688.1, score=23.3]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=152, Expect=1e-38]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=151, Expect=1e-38]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=145, Expect=3e-36]} {Celegans: WBGene00016038, cst-2, Caenorhabditis STE20-like kinase, [Score=134, Expect=9e-34]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=130, Expect=2e-33]} {RNA1509_12584, RNA1509_22244} {RNA1310_30847, RNA1509_12584} {RNA1509_12584, RNA815_7836.1}
25. MligTC455_53892 31 0.64 Mlig455_064056

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_064056 {REF} {Length: 546} {TRANSSPLICED} {RNA1509_48446} {RNA1310_90226}
26. MligTC455_23588 154 3.21 Mlig455_011811

Neo: -

Age: Down-Up-Down

 CNBD1 0.95 - - - - 0.950 - Mlig455_011811 {REF} {Length: 1638} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=34.1]} {Human: ENSG00000176571, CNBD1, cyclic nucleotide binding domain containing 1, [RH, Score=115, Expect=2e-29]} {Smed: dd_Smed_v6_14225_0_1, dd_Smed_v6_14225_0_1, [Score=186, Expect=2e-53]} {RNA1509_35878} {RNA1310_17903} {RNA815_7217}
27. MligTC455_25026 230 4.79 Mlig455_014676

Neo: -

Age: Up-Down-Down

Region-enriched R4: 3.361/0.00970

 0.95 - - - - 0.950 - Mlig455_014676 {REF} {Length: 2004} {RNA1509_19923} {RNA1310_20222} {RNA815_2554}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA