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Results for MligTC455_48106

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48106 436 9.08 Mlig455_034698

Neo: -

Age: -

 STXBP1 Mlig455_034698 {REF} {Length: 4083} {Pfam: Sec1 family [PF00995.25, score=402.2]} {Human: ENSG00000136854, STXBP1, syntaxin binding protein 1, [RH, Score=711, Expect=0.0]} {Mouse: ENSMUSG00000026797, Stxbp1, syntaxin binding protein 1, [RH, Score=711, Expect=0.0]} {Dmel: FBgn0004574, Rop, Ras opposite, [RH, Score=685, Expect=0.0]} {Celegans: WBGene00006757, unc-18, Putative acetylcholine regulator unc-18, [RH, Score=628, Expect=0.0]} {Smed: dd_Smed_v6_7111_0_1, dd_Smed_v6_7111_0_1, [RH, Score=809, Expect=0.0]} {RNA1509_4729} {RNA1310_11788.1, RNA1509_4729} {RNA1509_4729, RNA815_1201}

Cumulative graph for MligTC455_48106

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.157 3.596 0.22718 0.87118
RegionR2 1.252 3.596 0.01411 0.12464
RegionR3 -0.172 3.596 0.64417 1.00000
RegionR4 -1.055 3.596 0.04701 0.18495
RegionR5 -0.763 3.596 0.02428 0.11137
RegionR6 -0.439 3.596 0.26002 0.84770
RegionR7 0.516 3.596 0.30818 0.94228
RegionR8 -0.497 3.596 0.49033 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.32 3.596 0.15415 0.89645
RegenerationR2 -0.305 3.596 0.48346 0.86452
RegenerationR3 0.152 3.596 0.75835 0.96707
RegenerationR4 0.284 3.596 0.58682 0.90754
RegenerationR5 0.283 3.596 0.52437 0.87177
RegenerationR6 0.347 3.596 0.50474 0.80966
RegenerationBL -0.791 3.596 0.36906 0.73730
RegenerationTP -0.132 3.596 0.85336 1.00000


Genes with expression patterns similar to MligTC455_48106

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48106 436 9.08 Mlig455_034698

Neo: -

Age: -

 STXBP1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_034698 {REF} {Length: 4083} {Pfam: Sec1 family [PF00995.25, score=402.2]} {Human: ENSG00000136854, STXBP1, syntaxin binding protein 1, [RH, Score=711, Expect=0.0]} {Mouse: ENSMUSG00000026797, Stxbp1, syntaxin binding protein 1, [RH, Score=711, Expect=0.0]} {Dmel: FBgn0004574, Rop, Ras opposite, [RH, Score=685, Expect=0.0]} {Celegans: WBGene00006757, unc-18, Putative acetylcholine regulator unc-18, [RH, Score=628, Expect=0.0]} {Smed: dd_Smed_v6_7111_0_1, dd_Smed_v6_7111_0_1, [RH, Score=809, Expect=0.0]} {RNA1509_4729} {RNA1310_11788.1, RNA1509_4729} {RNA1509_4729, RNA815_1201}
2. MligTC455_04529 474 9.87 Mlig455_019609

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.277

 YIPF1 1.701 - - 0.744 - - 0.957 Mlig455_019609 {REF} {Length: 1587} {TRANSSPLICED} {Pfam: Yip1 domain [PF04893.19, score=48.9]} {Human: ENSG00000058799, YIPF1, Yip1 domain family member 1, [RH, Score=206, Expect=3e-64]} {Mouse: ENSMUSG00000057375, Yipf1, Yip1 domain family, member 1, [RH, Score=205, Expect=5e-64]} {Dmel: FBgn0030435, CG4645, [RH, Score=170, Expect=5e-50]} {Celegans: WBGene00021294, Y25C1A.7, [RH, Score=199, Expect=8e-61]} {Smed: dd_Smed_v6_3454_0_1, dd_Smed_v6_3454_0_1, [RH, Score=229, Expect=4e-74]} {RNA1509_28233, RNA1509_48947} {RNA1310_20421.1, RNA1509_28233} {RNA1509_28233, RNA815_8027.1}
3. MligTC455_42404 1993 41.52 Mlig455_043988, Mlig455_050697

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 1.455/0.00555

 USP2 0.965 - - - - - 0.965

Mlig455_043988 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=245.9]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=56.3]} {Human: ENSG00000036672, USP2, ubiquitin specific peptidase 2, [RH, Score=288, Expect=4e-90]} {Mouse: ENSMUSG00000032010, Usp2, ubiquitin specific peptidase 2, [RH, Score=288, Expect=3e-90]} {Dmel: FBgn0031187, Usp2, Ubiquitin specific protease 2, [RH, Score=294, Expect=6e-90]} {Celegans: WBGene00013506, usp-3, Ubiquitinyl hydrolase 1, [RH, Score=167, Expect=6e-46]} {Smed: dd_Smed_v6_7150_0_1, dd_Smed_v6_7150_0_1, [RH, Score=330, Expect=5e-107]} {RNA1509_5139} {RNA1310_18344} {RNA815_13152}

Mlig455_050697 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=245.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=56.8]} {Human: ENSG00000036672, USP2, ubiquitin specific peptidase 2, [RH, Score=286, Expect=1e-89]} {Mouse: ENSMUSG00000032010, Usp2, ubiquitin specific peptidase 2, [RH, Score=288, Expect=4e-90]} {Dmel: FBgn0031187, Usp2, Ubiquitin specific protease 2, [RH, Score=292, Expect=4e-89]} {Celegans: WBGene00013506, usp-3, Ubiquitinyl hydrolase 1, [RH, Score=165, Expect=8e-45]} {Smed: dd_Smed_v6_7150_0_1, dd_Smed_v6_7150_0_1, [RH, Score=334, Expect=2e-108]} {RNA1509_5139} {RNA1310_18344} {RNA815_13152}
4. MligTC455_23257 429 8.94 Mlig455_048632

Neo: -

Age: logFC(26M/2M)=-0.515

Region-enriched R4: 3.681/0.00001
Region-enriched R5: 1.663/0.00659

 0.963 - - - - - 0.963 Mlig455_048632 {REF} {Length: 6170} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=24.7]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=20.5]} {RNA1509_8517} {RNA1310_2320.1} {RNA815_744}
5. MligTC455_30828 727 15.14 Mlig455_056575

Neo: -

Age: -

 RAB8A 0.96 - - - - - 0.960 Mlig455_056575 {REF} {Length: 2746} {Pfam: Ras family [PF00071.24, score=213.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.9]; ADP-ribosylation factor family [PF00025.23, score=60.2]; Gtr1/RagA G protein conserved region [PF04670.14, score=28.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=25.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [RH, Score=303, Expect=2e-105]; ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [RH, Score=300, Expect=5e-104]} {Mouse: ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [RH, Score=302, Expect=2e-105]; ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [RH, Score=300, Expect=2e-104]} {Dmel: FBgn0262518, Rab8, [RH, Score=281, Expect=5e-97]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [RH, Score=271, Expect=2e-93]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [RH, Score=281, Expect=4e-97]} {RNA1509_3060, RNA1509_34586, RNA1509_46762} {RNA1310_14174, RNA1509_34586, RNA1509_46762} {RNA1509_34586, RNA1509_46762, RNA815_3345.1}
6. MligTC455_47225 366 7.63 Mlig455_055544

Neo: -

Age: -

 RAB9A 0.952 - - - - - 0.952 Mlig455_055544 {REF} {Length: 4152} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=172.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=111.6]; ADP-ribosylation factor family [PF00025.23, score=38.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.4]; RsgA GTPase [PF03193.18, score=21.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.9]} {Human: ENSG00000123595, RAB9A, RAB9A, member RAS oncogene family, [RH, Score=192, Expect=7e-62]; ENSG00000123570, RAB9B, RAB9B, member RAS oncogene family, [RH, Score=192, Expect=9e-62]} {Mouse: ENSMUSG00000079316, Rab9, RAB9, member RAS oncogene family, [RH, Score=194, Expect=1e-62]; ENSMUSG00000043463, Rab9b, RAB9B, member RAS oncogene family, [RH, Score=191, Expect=2e-61]} {Dmel: FBgn0032782, Rab9, [RH, Score=191, Expect=1e-60]} {Celegans: WBGene00004271, rab-7, RAB family, [Score=153, Expect=1e-46]} {Smed: dd_Smed_v6_6588_0_1, dd_Smed_v6_6588_0_1, [RH, Score=158, Expect=3e-48]} {RNA1509_32195, RNA1509_39673, RNA1509_41228} {RNA1310_41092, RNA1509_32195, RNA1509_41228} {RNA1509_32195, RNA1509_41228, RNA815_29088}
7. MligTC455_45430 887 18.47 Mlig455_057178

Neo: Int S/G2/M

Age: -

 CAND1 0.95 - - - - 0.950 - Mlig455_057178 {REF} {Length: 5732} {Pfam: TATA-binding protein interacting (TIP20) [PF08623.12, score=154.6]; Adaptin N terminal region [PF01602.22, score=39.3]; HEAT repeats [PF13646.8, score=38.4]; HEAT repeat [PF02985.24, score=26.5]; UME (NUC010) domain [PF08064.15, score=25.0]} {Human: ENSG00000111530, CAND1, cullin associated and neddylation dissociated 1, [RH, Score=904, Expect=0.0]} {Mouse: ENSMUSG00000020114, Cand1, cullin associated and neddylation disassociated 1, [RH, Score=901, Expect=0.0]} {Dmel: FBgn0027568, Cand1, Cullin-associated and neddylation-dissociated 1, [RH, Score=803, Expect=0.0]} {Celegans: WBGene00013606, cand-1, Cullin-associated NEDD8-dissociated protein 1, [RH, Score=471, Expect=3e-144]} {Smed: dd_Smed_v6_6507_0_1, dd_Smed_v6_6507_0_1, [RH, Score=638, Expect=0.0]} {RNA1509_24327, RNA1509_4867, RNA1509_57069} {RNA1310_1644.1, RNA1509_24327, RNA1509_57069} {RNA1509_24327, RNA1509_57069, RNA815_456}

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