Data search
Results for MligTC455_48130
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48130 | 774 | 16.13 | Mlig455_045807 | Neo: - Age: - |
PARP2 | Mlig455_045807 {REF} {Length: 3208} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase, regulatory domain [PF02877.16, score=141.5]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=86.3]; WGR domain [PF05406.17, score=85.4]; WWE domain [PF02825.22, score=78.1]} {Human: ENSG00000129484, PARP2, poly(ADP-ribose) polymerase 2, [Score=381, Expect=2e-121]} {Mouse: ENSMUSG00000036023, Parp2, poly (ADP-ribose) polymerase family, member 2, [Score=398, Expect=2e-128]} {Dmel: FBgn0010247, Parp, Poly-(ADP-ribose) polymerase, [Score=228, Expect=3e-62]} {Celegans: WBGene00004049, parp-1, Poly(ADP-ribose) polymerase pme-1, [Score=214, Expect=1e-57]} {Smed: dd_Smed_v6_6154_0_8, dd_Smed_v6_6154_0_8, [Score=371, Expect=6e-116]} {RNA1509_8942} {RNA1310_3564} {RNA815_16295} |
Cumulative graph for MligTC455_48130
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.358 | 4.301 | 0.76490 | 1.00000 | |
| RegionR2 | 0.966 | 4.301 | 0.16057 | 0.50124 | |
| RegionR3 | 0.327 | 4.301 | 0.55242 | 1.00000 | |
| RegionR4 | -0.334 | 4.301 | 0.58773 | 0.90311 | |
| RegionR5 | 0.069 | 4.301 | 0.89473 | 1.00000 | |
| RegionR6 | -0.42 | 4.301 | 0.47209 | 1.00000 | |
| RegionR7 | -0.283 | 4.301 | 0.67083 | 1.00000 | |
| RegionR8 | 0.033 | 4.301 | 0.96539 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.816 | 4.301 | 0.60864 | 1.00000 | |
| RegenerationR2 | -0.085 | 4.301 | 0.89657 | 1.00000 | |
| RegenerationR3 | 0.88 | 4.301 | 0.22878 | 0.66374 | |
| RegenerationR4 | 0.493 | 4.301 | 0.47964 | 0.85850 | |
| RegenerationR5 | 0.288 | 4.301 | 0.67257 | 0.94198 | |
| RegenerationR6 | 1.35 | 4.301 | 0.06065 | 0.30967 | |
| RegenerationBL | 1.034 | 4.301 | 0.14987 | 0.46250 | |
| RegenerationTP | 0.835 | 4.301 | 0.28736 | 0.73329 |
Genes with expression patterns similar to MligTC455_48130
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48130 | 774 | 16.13 | Mlig455_045807 | Neo: - Age: - |
PARP2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_045807 {REF} {Length: 3208} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase, regulatory domain [PF02877.16, score=141.5]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=86.3]; WGR domain [PF05406.17, score=85.4]; WWE domain [PF02825.22, score=78.1]} {Human: ENSG00000129484, PARP2, poly(ADP-ribose) polymerase 2, [Score=381, Expect=2e-121]} {Mouse: ENSMUSG00000036023, Parp2, poly (ADP-ribose) polymerase family, member 2, [Score=398, Expect=2e-128]} {Dmel: FBgn0010247, Parp, Poly-(ADP-ribose) polymerase, [Score=228, Expect=3e-62]} {Celegans: WBGene00004049, parp-1, Poly(ADP-ribose) polymerase pme-1, [Score=214, Expect=1e-57]} {Smed: dd_Smed_v6_6154_0_8, dd_Smed_v6_6154_0_8, [Score=371, Expect=6e-116]} {RNA1509_8942} {RNA1310_3564} {RNA815_16295} |
| 2. | MligTC455_48271 | 156 | 3.25 | Mlig455_035844 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R5: 1.747/0.01518 |
0.965 | - | - | - | 0.965 | - | - | Mlig455_035844 {REF} {Length: 1268} {TRANSSPLICED} {RNA1509_6691} {RNA1310_27408.2} {RNA815_50567} | |
| 3. | MligTC455_40608 | 60 | 1.24 | Mlig455_019670 | Neo: Int S/G2/M Age: Down-Up-Up |
0.954 | - | - | - | - | - | 0.954 | Mlig455_019670 {REF} {Length: 843} {TRANSSPLICED} {RNA1509_36909} {RNA1310_34598} {RNA815_16148} | |
| 4. | MligTC455_50910 | 1223 | 25.48 | Mlig455_039519 | Neo: - Age: logFC(26M/2M)=-0.270 Region-enriched R4: 1.934/0.00000 |
PPP1R3A | 0.954 | - | - | - | 0.954 | - | - | Mlig455_039519 {REF} {Length: 2457} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=95.8]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=48.8]} {Human: ENSG00000154415, PPP1R3A, protein phosphatase 1 regulatory subunit 3A, [Score=104, Expect=2e-23]} {Mouse: ENSMUSG00000042717, Ppp1r3a, protein phosphatase 1, regulatory subunit 3A, [RH, Score=105, Expect=4e-24]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=132, Expect=2e-33]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=85.9, Expect=2e-18]} {Smed: dd_Smed_v6_4959_0_1, dd_Smed_v6_4959_0_1, [Score=156, Expect=3e-45]} {RNA1509_10448, RNA1509_20565, RNA1509_28737, RNA1509_33243, RNA1509_4030} {RNA1310_10714, RNA1509_10448, RNA1509_20565, RNA1509_28737, RNA1509_33243, RNA1509_4030} {RNA1509_10448, RNA1509_20565, RNA1509_28737, RNA1509_33243, RNA1509_4030, RNA815_3667.1} |
Berezikov Lab - 2020-2021 © ERIBA