TomoSeq data search

Data search

Results for MligTC455_48204

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48204

113

2.35

Mlig455_020974

Neo: -

Age: logFC(26M/2M)=0.716

SNX4

Mlig455_020974 {REF} {Length: 2586} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=50.6]} {Human: ENSG00000114520, SNX4, sorting nexin 4, [RH, Score=175, Expect=2e-49]} {Mouse: ENSMUSG00000022808, Snx4, sorting nexin 4, [RH, Score=181, Expect=6e-52]} {Dmel: FBgn0038065, Snx3, Sorting nexin 3, [Score=48.5, Expect=2e-06]} {Celegans: WBGene00006503, snx-3, Sorting NeXin, [Score=47.0, Expect=3e-06]} {Smed: dd_Smed_v6_5267_0_1, dd_Smed_v6_5267_0_1, [Score=50.1, Expect=1e-06]} {RNA1509_52971} {RNA1310_17017} {RNA815_6645}

Cumulative graph for MligTC455_48204

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.327	2.065	0.87289	1.00000
RegionR2	-0.147	2.065	0.89936	1.00000
RegionR3	0.839	2.065	0.24115	0.78261
RegionR4	-1.195	2.065	0.25498	0.55575
RegionR5	0.307	2.065	0.64826	1.00000
RegionR6	-0.033	2.065	0.97360	1.00000
RegionR7	0.031	2.065	0.96428	1.00000
RegionR8	0.525	2.065	0.68372	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.72	2.065	0.34429	1.00000
RegenerationR2	1.34	2.065	0.17896	0.62084
RegenerationR3	0.663	2.065	0.46901	0.84316
RegenerationR4	1.608	2.065	0.12971	0.54494
RegenerationR5	1.015	2.065	0.21745	0.65211
RegenerationR6	0.629	2.065	0.53491	0.83004
RegenerationBL	0.856	2.065	0.54163	0.90001
RegenerationTP	-0.219	2.065	0.88803	1.00000

Genes with expression patterns similar to MligTC455_48204

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48204	113	2.35	Mlig455_020974	Neo: - Age: logFC(26M/2M)=0.716	SNX4	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_020974 {REF} {Length: 2586} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=50.6]} {Human: ENSG00000114520, SNX4, sorting nexin 4, [RH, Score=175, Expect=2e-49]} {Mouse: ENSMUSG00000022808, Snx4, sorting nexin 4, [RH, Score=181, Expect=6e-52]} {Dmel: FBgn0038065, Snx3, Sorting nexin 3, [Score=48.5, Expect=2e-06]} {Celegans: WBGene00006503, snx-3, Sorting NeXin, [Score=47.0, Expect=3e-06]} {Smed: dd_Smed_v6_5267_0_1, dd_Smed_v6_5267_0_1, [Score=50.1, Expect=1e-06]} {RNA1509_52971} {RNA1310_17017} {RNA815_6645}
2.	MligTC455_52811	39	0.81	Mlig455_031331	Neo: Int S/G2/M Age: - Region-enriched R5: 3.422/0.02134		1.727	-	-	-	0.776	-	0.951	Mlig455_031331 {REF} {Length: 492} {NoTransDecoderORF} {RNA1509_47533} {RNA1310_79837.2} {RNA815_48370}
3.	MligTC455_48137	440	9.16	Mlig455_030458	Neo: Int S/G2/M Age: logFC(26M/2M)=0.612	NTPCR	0.97	-	-	-	-	-	0.970	Mlig455_030458 {REF} {Length: 782} {TRANSSPLICED} {Pfam: NTPase [PF03266.17, score=131.8]; AAA domain [PF13401.8, score=29.3]; AAA domain [PF13604.8, score=28.4]; AAA ATPase domain [PF13191.8, score=25.7]; AAA domain [PF13238.8, score=23.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.1]; AAA domain [PF13521.8, score=21.1]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.7]; NACHT domain [PF05729.14, score=18.9]} {Human: ENSG00000135778, NTPCR, nucleoside-triphosphatase, cancer-related, [RH, Score=119, Expect=3e-33]} {Mouse: ENSMUSG00000031851, Ntpcr, nucleoside-triphosphatase, cancer-related, [RH, Score=108, Expect=3e-29]} {Dmel: FBgn0037046, CG10581, [RH, Score=94.0, Expect=1e-23]} {RNA1509_29841} {RNA1310_37079.2} {RNA815_20458.1}
4.	MligTC455_51579	550	11.47	Mlig455_042559	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.292	DIS3L	0.966	-	-	-	-	-	0.966	Mlig455_042559 {REF} {Length: 3524} {TRANSSPLICED} {Pfam: RNB domain [PF00773.21, score=268.4]; Dis3-like cold-shock domain 2 (CSD2) [PF17849.3, score=74.6]; Rrp44-like cold shock domain [PF17216.5, score=28.1]; Cold shock domain [PF17876.3, score=23.3]; S1 domain [PF17215.5, score=19.3]} {Human: ENSG00000166938, DIS3L, DIS3 like exosome 3'-5' exoribonuclease, [RH, Score=869, Expect=0.0]} {Mouse: ENSMUSG00000032396, Dis3l, DIS3 like exosome 3'-5' exoribonuclease, [RH, Score=872, Expect=0.0]} {Dmel: FBgn0039183, Dis3, [RH, Score=509, Expect=2e-163]} {Celegans: WBGene00001001, dis-3, Probable exosome complex exonuclease RRP44, [RH, Score=451, Expect=8e-142]} {Smed: dd_Smed_v6_6527_0_1, dd_Smed_v6_6527_0_1, [RH, Score=914, Expect=0.0]} {RNA1509_5285} {RNA1310_3365, RNA1509_5285} {RNA1509_5285, RNA815_3022}
5.	MligTC455_26220	49	1.03	Mlig455_032627	Neo: Irradiation Age: -		0.959	-	-	-	-	-	0.959	Mlig455_032627 {REF} {Length: 4049} {TRANSSPLICED} {RNA1509_38431} {RNA1310_17439} {RNA815_9396}
6.	MligTC455_49405	339	7.06	Mlig455_026717, Mlig455_051706	Neo: Irradiation Age: -		0.958	-	-	-	-	-	0.958	Mlig455_026717 {REF} {Length: 3047} {TRANSSPLICED} {RNA1509_30631} {RNA1310_7306} {RNA815_19830} Mlig455_051706 {REF} {Length: 3001} {TRANSSPLICED} {RNA1509_30631} {RNA1310_7306, RNA1509_30631} {RNA1509_30631, RNA815_19830}
7.	MligTC455_47555	709	14.77	Mlig455_050057, Mlig455_054012	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_050057 {REF} {Length: 2361} {TRANSSPLICED} {RNA1509_10598, RNA1509_41028} {RNA1310_33942.1, RNA1509_10598} {RNA1509_10598, RNA815_15423} Mlig455_054012 {REF} {Length: 1947} {TRANSSPLICED} {RNA1509_41028} {RNA1310_33942.1, RNA1509_41028} {RNA1509_41028, RNA815_15423}
8.	MligTC455_50721	201	4.18	Mlig455_008361	Neo: - Age: - Region-enriched R4: 1.715/0.01964	TECPR1	0.951	-	-	-	0.951	-	-	Mlig455_008361 {REF} {Length: 4987} {TRANSSPLICED} {Pfam: Propeller [PF06462.14, score=51.3]; Tectonin domain [PF19193.2, score=45.7]} {Human: ENSG00000205356, TECPR1, tectonin beta-propeller repeat containing 1, [Score=169, Expect=3e-43]} {Mouse: ENSMUSG00000066621, Tecpr1, tectonin beta-propeller repeat containing 1, [Score=161, Expect=8e-41]} {Dmel: FBgn0052226, Pex23, Peroxin 23, [Score=143, Expect=4e-35]} {Smed: dd_Smed_v6_7202_0_1, dd_Smed_v6_7202_0_1, [RH, Score=81.6, Expect=4e-16]} {RNA1509_19202} {RNA1310_3037, RNA1509_19202} {RNA1509_19202, RNA815_4288}

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