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Results for MligTC455_48242

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48242 3150 65.62 Mlig455_020469

Neo: Int S/G2/M

Age: Down-Down-Up

 GRWD1 Mlig455_020469 {REF} {Length: 1493} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=50.9]; Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=47.2]} {Human: ENSG00000105447, GRWD1, glutamate rich WD repeat containing 1, [RH, Score=349, Expect=4e-116]} {Mouse: ENSMUSG00000053801, Grwd1, glutamate-rich WD repeat containing 1, [RH, Score=350, Expect=5e-117]} {Dmel: FBgn0022288, l(2)09851, lethal (2) 09851, [RH, Score=360, Expect=1e-120]} {Celegans: WBGene00021899, Y54H5A.1, [RH, Score=317, Expect=6e-104]} {Smed: dd_Smed_v6_6158_0_1, dd_Smed_v6_6158_0_1, [RH, Score=303, Expect=4e-99]} {RNA1509_6098, RNA1509_7426} {RNA1310_21774, RNA1509_6098, RNA1509_7426} {RNA1509_6098, RNA1509_7426, RNA815_24887}

Cumulative graph for MligTC455_48242

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.798 6.203 0.20161 0.83896
RegionR2 -0.236 6.203 0.52930 0.90117
RegionR3 0.191 6.203 0.53495 1.00000
RegionR4 0.358 6.203 0.31362 0.62915
RegionR5 0.305 6.203 0.30017 0.63555
RegionR6 0.15 6.203 0.62954 1.00000
RegionR7 0.141 6.203 0.67965 1.00000
RegionR8 -0.112 6.203 0.78270 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.055 6.203 0.94712 1.00000
RegenerationR2 -0.188 6.203 0.61944 0.92321
RegenerationR3 0.063 6.203 0.87319 1.00000
RegenerationR4 0.171 6.203 0.67111 0.94266
RegenerationR5 -0.271 6.203 0.47476 0.84406
RegenerationR6 -0.087 6.203 0.82255 0.98798
RegenerationBL -0.286 6.203 0.45080 0.81778
RegenerationTP 0.207 6.203 0.60765 0.96536


Genes with expression patterns similar to MligTC455_48242

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48242 3150 65.62 Mlig455_020469

Neo: Int S/G2/M

Age: Down-Down-Up

 GRWD1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_020469 {REF} {Length: 1493} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=50.9]; Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=47.2]} {Human: ENSG00000105447, GRWD1, glutamate rich WD repeat containing 1, [RH, Score=349, Expect=4e-116]} {Mouse: ENSMUSG00000053801, Grwd1, glutamate-rich WD repeat containing 1, [RH, Score=350, Expect=5e-117]} {Dmel: FBgn0022288, l(2)09851, lethal (2) 09851, [RH, Score=360, Expect=1e-120]} {Celegans: WBGene00021899, Y54H5A.1, [RH, Score=317, Expect=6e-104]} {Smed: dd_Smed_v6_6158_0_1, dd_Smed_v6_6158_0_1, [RH, Score=303, Expect=4e-99]} {RNA1509_6098, RNA1509_7426} {RNA1310_21774, RNA1509_6098, RNA1509_7426} {RNA1509_6098, RNA1509_7426, RNA815_24887}
2. MligTC455_23659 3246 67.62 Mlig455_028388

Neo: Int S/G2/M

Age: -

 NEDD8 0.961 - - - - - 0.961 Mlig455_028388 {REF} {Length: 690} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=90.3]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=58.5]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=21.1]; Ubiquitin-like domain [PF14560.8, score=20.7]} {Human: ENSG00000285246, NEDD8, neural precursor cell expressed, developmentally down-regulated 8, [RH, Score=134, Expect=1e-42]; ENSG00000129559, NEDD8, neural precursor cell expressed, developmentally down-regulated 8, [RH, Score=134, Expect=1e-42]} {Mouse: ENSMUSG00000010376, Nedd8, neural precursor cell expressed, developmentally down-regulated gene 8, [RH, Score=119, Expect=7e-37]} {Dmel: FBgn0032725, Nedd8, [RH, Score=134, Expect=1e-42]} {Celegans: WBGene00003587, ned-8, NEDD8, [RH, Score=132, Expect=3e-42]} {Smed: dd_Smed_v6_403_0_1, dd_Smed_v6_403_0_1, [RH, Score=133, Expect=1e-42]} {RNA1509_4548} {RNA1310_34741} {RNA815_23503}
3. MligTC455_43798 3196 66.58 Mlig455_004916

Neo: Int S/G2/M

Age: Down-Down-Up, logFC(26M/2M)=-0.244

 LSM7 0.959 - - - - - 0.959 Mlig455_004916 {REF} {Length: 760} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=63.0]} {Human: ENSG00000130332, LSM7, LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=145, Expect=7e-46]} {Mouse: ENSMUSG00000035215, Lsm7, LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=145, Expect=3e-46]} {Dmel: FBgn0261068, LSm7, Like Sm 7, [RH, Score=140, Expect=4e-44]} {Celegans: WBGene00003081, lsm-7, LSM Sm-like protein, [RH, Score=122, Expect=2e-37]} {Smed: dd_Smed_v6_3610_0_1, dd_Smed_v6_3610_0_1, [RH, Score=142, Expect=5e-45]} {RNA1509_19701, RNA1509_5632} {RNA1310_2555.1, RNA1509_19701} {RNA1509_19701, RNA815_17978}
4. MligTC455_48373 1203 25.06 Mlig455_050100

Neo: -

Age: Down-Down-Up

Region-enriched R4: 1.054/0.00251

 CCDC25 0.955 - - - - - 0.955 Mlig455_050100 {REF} {Length: 839} {TRANSSPLICED} {Pfam: NFACT protein RNA binding domain [PF05670.15, score=124.7]; Secretory protein of YscJ/FliF family [PF01514.19, score=21.1]; Caldesmon [PF02029.17, score=18.6]} {Human: ENSG00000147419, CCDC25, coiled-coil domain containing 25, [RH, Score=213, Expect=4e-70]} {Mouse: ENSMUSG00000022035, Ccdc25, coiled-coil domain containing 25, [RH, Score=216, Expect=2e-71]} {Dmel: FBgn0029929, CG4593, [RH, Score=228, Expect=2e-76]} {Celegans: WBGene00013213, Y54G11A.2, [RH, Score=209, Expect=7e-69]} {Smed: dd_Smed_v6_4506_0_1, dd_Smed_v6_4506_0_1, [RH, Score=242, Expect=3e-82]} {RNA1509_19692} {RNA1310_42614} {RNA815_21229}
5. MligTC455_23769 5785 120.52 Mlig455_017167, Mlig455_048116

Neo: Int S/G2/M

Age: Down-Down-Up, logFC(26M/2M)=0.312

 PTRH2 0.951 - - - - - 0.951

Mlig455_017167 {REF} {Length: 818} {TRANSSPLICED} {Pfam: Peptidyl-tRNA hydrolase PTH2 [PF01981.18, score=142.5]} {Human: ENSG00000141378, PTRH2, peptidyl-tRNA hydrolase 2, [RH, Score=132, Expect=5e-39]} {Mouse: ENSMUSG00000072582, Ptrh2, peptidyl-tRNA hydrolase 2, [RH, Score=134, Expect=1e-39]} {Dmel: FBgn0038107, CG17327, [RH, Score=116, Expect=1e-33]} {Celegans: WBGene00016062, C24G6.8, Probable peptidyl-tRNA hydrolase 2, [RH, Score=80.5, Expect=3e-18]} {Smed: dd_Smed_v6_2074_0_1, dd_Smed_v6_2074_0_1, [RH, Score=155, Expect=2e-48]} {RNA1509_6128} {RNA1310_38221.2, RNA1509_6128} {RNA1509_6128, RNA815_21737}

Mlig455_048116 {REF} {Length: 824} {TRANSSPLICED} {Pfam: Peptidyl-tRNA hydrolase PTH2 [PF01981.18, score=142.5]} {Human: ENSG00000141378, PTRH2, peptidyl-tRNA hydrolase 2, [RH, Score=132, Expect=7e-39]} {Mouse: ENSMUSG00000072582, Ptrh2, peptidyl-tRNA hydrolase 2, [RH, Score=134, Expect=7e-40]} {Dmel: FBgn0038107, CG17327, [RH, Score=116, Expect=2e-33]} {Celegans: WBGene00016062, C24G6.8, Probable peptidyl-tRNA hydrolase 2, [RH, Score=80.5, Expect=4e-18]} {Smed: dd_Smed_v6_2074_0_1, dd_Smed_v6_2074_0_1, [RH, Score=154, Expect=4e-48]} {RNA1509_12268, RNA1509_32003, RNA1509_37032, RNA1509_6128} {RNA1310_38221.2, RNA1509_12268, RNA1509_32003, RNA1509_37032} {RNA1509_12268, RNA1509_32003, RNA1509_37032, RNA815_21737}

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