M. lignano Tomo-Seq
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Results for MligTC455_48294

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48294 873 18.19 Mlig455_001770, Mlig455_039269

Neo: -

Age: Up-Up-Down

 SLC25A16

Mlig455_001770 {REF} {Length: 2525} {Pfam: Mitochondrial carrier protein [PF00153.29, score=193.3]} {Human: ENSG00000122912, SLC25A16, solute carrier family 25 member 16, [RH, Score=257, Expect=7e-84]} {Mouse: ENSMUSG00000071253, Slc25a16, solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16, [RH, Score=255, Expect=3e-83]} {Dmel: FBgn0067783, DPCoAC, Dephosphocoenzyme A carrier, [Score=140, Expect=2e-39]} {Celegans: WBGene00009666, slc-25A42, SLC (SoLute Carrier) homolog, [Score=142, Expect=4e-40]} {Smed: dd_Smed_v6_12981_0_1, dd_Smed_v6_12981_0_1, [RH, Score=221, Expect=2e-70]} {RNA1509_13258} {RNA1310_17309, RNA1509_13258} {RNA1509_13258, RNA815_13428.1}

Mlig455_039269 {REF} {Length: 2504} {Pfam: Mitochondrial carrier protein [PF00153.29, score=192.9]} {Human: ENSG00000122912, SLC25A16, solute carrier family 25 member 16, [RH, Score=256, Expect=2e-83]} {Mouse: ENSMUSG00000071253, Slc25a16, solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16, [RH, Score=254, Expect=8e-83]} {Dmel: FBgn0067783, DPCoAC, Dephosphocoenzyme A carrier, [Score=140, Expect=3e-39]} {Celegans: WBGene00009666, slc-25A42, SLC (SoLute Carrier) homolog, [Score=142, Expect=5e-40]} {Smed: dd_Smed_v6_12981_0_1, dd_Smed_v6_12981_0_1, [RH, Score=223, Expect=1e-70]} {RNA1509_13258} {RNA1310_17309} {RNA815_13428.1}

Cumulative graph for MligTC455_48294

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.277 4.467 0.28828 0.94072
RegionR2 0.814 4.467 0.06878 0.31901
RegionR3 -0.125 4.467 0.75518 1.00000
RegionR4 0.196 4.467 0.66670 0.96447
RegionR5 -0.006 4.467 0.98969 1.00000
RegionR6 0.3 4.467 0.42156 0.98830
RegionR7 -0.103 4.467 0.83249 1.00000
RegionR8 0.2 4.467 0.71782 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.729 4.467 0.22934 0.95946
RegenerationR2 -0.314 4.467 0.39440 0.81130
RegenerationR3 -0.575 4.467 0.19090 0.62582
RegenerationR4 -1.082 4.467 0.01648 0.20123
RegenerationR5 -0.397 4.467 0.33544 0.75500
RegenerationR6 -0.885 4.467 0.04184 0.25573
RegenerationBL 0.463 4.467 0.29319 0.65549
RegenerationTP -0.059 4.467 0.91124 1.00000


Genes with expression patterns similar to MligTC455_48294

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48294 873 18.19 Mlig455_001770, Mlig455_039269

Neo: -

Age: Up-Up-Down

 SLC25A16 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_001770 {REF} {Length: 2525} {Pfam: Mitochondrial carrier protein [PF00153.29, score=193.3]} {Human: ENSG00000122912, SLC25A16, solute carrier family 25 member 16, [RH, Score=257, Expect=7e-84]} {Mouse: ENSMUSG00000071253, Slc25a16, solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16, [RH, Score=255, Expect=3e-83]} {Dmel: FBgn0067783, DPCoAC, Dephosphocoenzyme A carrier, [Score=140, Expect=2e-39]} {Celegans: WBGene00009666, slc-25A42, SLC (SoLute Carrier) homolog, [Score=142, Expect=4e-40]} {Smed: dd_Smed_v6_12981_0_1, dd_Smed_v6_12981_0_1, [RH, Score=221, Expect=2e-70]} {RNA1509_13258} {RNA1310_17309, RNA1509_13258} {RNA1509_13258, RNA815_13428.1}

Mlig455_039269 {REF} {Length: 2504} {Pfam: Mitochondrial carrier protein [PF00153.29, score=192.9]} {Human: ENSG00000122912, SLC25A16, solute carrier family 25 member 16, [RH, Score=256, Expect=2e-83]} {Mouse: ENSMUSG00000071253, Slc25a16, solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16, [RH, Score=254, Expect=8e-83]} {Dmel: FBgn0067783, DPCoAC, Dephosphocoenzyme A carrier, [Score=140, Expect=3e-39]} {Celegans: WBGene00009666, slc-25A42, SLC (SoLute Carrier) homolog, [Score=142, Expect=5e-40]} {Smed: dd_Smed_v6_12981_0_1, dd_Smed_v6_12981_0_1, [RH, Score=223, Expect=1e-70]} {RNA1509_13258} {RNA1310_17309} {RNA815_13428.1}
2. MligTC455_24122 547 11.39 Mlig455_028866

Neo: -

Age: -

 TRAPPC4 1.669 - - - 0.961 - 0.708 Mlig455_028866 {REF} {Length: 5945} {TRANSSPLICED} {Pfam: Sybindin-like family [PF04099.14, score=131.2]} {Human: ENSG00000280495, TRAPPC4, trafficking protein particle complex 4, [RH, Score=225, Expect=1e-66]; ENSG00000196655, TRAPPC4, trafficking protein particle complex 4, [RH, Score=225, Expect=1e-66]} {Mouse: ENSMUSG00000032112, Trappc4, trafficking protein particle complex 4, [RH, Score=227, Expect=2e-67]} {Dmel: FBgn0260861, Trs23, TRAPP subunit 23, [RH, Score=180, Expect=3e-51]} {Celegans: WBGene00018088, trpp-4, TRansport Protein Particle, [RH, Score=163, Expect=3e-45]} {Smed: dd_Smed_v6_6901_0_1, dd_Smed_v6_6901_0_1, [RH, Score=176, Expect=4e-50]} {RNA1509_19972, RNA1509_26872, RNA1509_50070} {RNA1310_2012.1, RNA1509_26872, RNA1509_50070} {RNA1509_26872, RNA1509_50070, RNA815_6276}
3. MligTC455_18267 916 19.07 Mlig455_042717

Neo: -

Age: -

 0.957 - - - 0.957 - - Mlig455_042717 {REF} {Length: 814} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_8372} {RNA1310_6900} {RNA815_21704}
4. MligTC455_48180 740 15.42 Mlig455_031416, Mlig455_056475

Neo: -

Age: -

Region-enriched R4: 1.345/0.01079

 0.957 - - - - - 0.957

Mlig455_031416 {REF} {Length: 5232} {TRANSSPLICED} {Smed: dd_Smed_v6_4245_0_1, dd_Smed_v6_4245_0_1, [Score=71.2, Expect=4e-13]} {RNA1509_29315, RNA1509_29337} {RNA1310_15826, RNA1509_29315, RNA1509_29337} {RNA1509_29315, RNA1509_29337, RNA815_18925}

Mlig455_056475 {REF} {Length: 5685} {TRANSSPLICED} {Smed: dd_Smed_v6_4245_0_1, dd_Smed_v6_4245_0_1, [Score=71.2, Expect=4e-13]} {RNA1509_29337, RNA1509_43766} {RNA1310_15826, RNA1509_43766} {RNA1509_43766, RNA815_18925}
5. MligTC455_20456 969 20.18 Mlig455_009820

Neo: -

Age: logFC(26M/2M)=-0.309

Region-enriched R4: 2.126/0.01785

 CCDC170 0.954 - - - 0.954 - - Mlig455_009820 {REF} {Length: 4514} {Human: ENSG00000120262, CCDC170, coiled-coil domain containing 170, [Score=186, Expect=6e-49]} {Mouse: ENSMUSG00000019767, Ccdc170, coiled-coil domain containing 170, [Score=194, Expect=7e-52]} {Dmel: FBgn0263079, CG43338, [Score=110, Expect=2e-24]} {Smed: dd_Smed_v6_7992_0_1, dd_Smed_v6_7992_0_1, [RH, Score=311, Expect=1e-93]} {RNA1509_4390, RNA1509_44137} {RNA1310_11987, RNA1509_44137} {RNA1509_44137, RNA815_3101}
6. MligTC455_13977 1496 31.16 Mlig455_039726

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.608

 CXorf65 0.953 - - - 0.953 - - Mlig455_039726 {REF} {Length: 962} {Pfam: Putative Interleukin 2 receptor, gamma chain [PF15874.7, score=76.8]} {Human: ENSG00000204165, CXorf65, chromosome X open reading frame 65, [RH, Score=52.0, Expect=3e-08]} {Mouse: ENSMUSG00000090141, Gm614, predicted gene 614, [RH, Score=53.9, Expect=4e-09]} {RNA1509_44868, RNA1509_8992} {RNA1310_45539.1, RNA1509_44868, RNA1509_8992} {RNA1509_44868, RNA1509_8992, RNA815_12228}
7. MligTC455_45322 836 17.42 Mlig455_041660

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.310

Region-enriched R4: 1.744/0.00007

 NUDT18 0.95 - - - 0.950 - - Mlig455_041660 {REF} {Length: 2193} {TRANSSPLICED} {Pfam: NUDIX domain [PF00293.30, score=53.7]} {Human: ENSG00000275074, NUDT18, nudix hydrolase 18, [RH, Score=95.9, Expect=1e-21]} {Mouse: ENSMUSG00000045211, Nudt18, nudix (nucleoside diphosphate linked moiety X)-type motif 18, [RH, Score=92.0, Expect=2e-20]} {Dmel: FBgn0037911, CG10898, [RH, Score=91.7, Expect=2e-20]} {Celegans: WBGene00003578, ndx-1, Putative nudix hydrolase 1, [RH, Score=106, Expect=1e-25]} {Smed: dd_Smed_v6_2689_0_1, dd_Smed_v6_2689_0_1, [RH, Score=119, Expect=5e-31]} {RNA1509_20760, RNA1509_30897} {RNA1310_16185.3, RNA1509_20760, RNA1509_30897} {RNA1509_20760, RNA1509_30897, RNA815_7867}

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