TomoSeq data search

Data search

Results for MligTC455_48312

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48312

428

8.92

Mlig455_007192, Mlig455_007199, Mlig455_007261

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.366

Region-enriched R7: 2.783/0.01803

SVOP

Mlig455_007192 {REF} {Length: 2307} {Pfam: Sugar (and other) transporter [PF00083.26, score=114.1]; Major Facilitator Superfamily [PF07690.18, score=97.1]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=306, Expect=3e-97]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=300, Expect=4e-95]} {Dmel: FBgn0034956, CG4324, [Score=253, Expect=5e-78]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=297, Expect=1e-94]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=331, Expect=3e-108]} {RNA1509_56107} {RNA1310_14131} {RNA815_5149}

Mlig455_007199 {REF} {Length: 1857} {Pfam: Sugar (and other) transporter [PF00083.26, score=105.5]; Major Facilitator Superfamily [PF07690.18, score=85.8]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=215, Expect=2e-63]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=160, Expect=3e-43]} {Dmel: FBgn0034956, CG4324, [Score=193, Expect=6e-56]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=235, Expect=7e-72]} {Smed: dd_Smed_v6_17273_0_1, dd_Smed_v6_17273_0_1, [Score=232, Expect=3e-71]} {RNA1509_56107} {RNA1310_13789} {RNA815_5149}

Mlig455_007261 {REF} {Length: 2309} {Pfam: Sugar (and other) transporter [PF00083.26, score=113.8]; Major Facilitator Superfamily [PF07690.18, score=97.1]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=303, Expect=4e-96]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=296, Expect=2e-93]} {Dmel: FBgn0034956, CG4324, [Score=259, Expect=3e-80]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=294, Expect=2e-93]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=335, Expect=6e-110]} {RNA1509_56107} {RNA1310_14131} {RNA815_5149}

Cumulative graph for MligTC455_48312

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.965	3.434	0.14951	0.76385
RegionR2	1.256	3.434	0.24489	0.62160
RegionR3	-0.132	3.434	0.89215	1.00000
RegionR4	-0.654	3.434	0.97077	1.00000
RegionR5	-0.174	3.434	0.90212	1.00000
RegionR6	1.18	3.434	0.20561	0.78027
RegionR7	2.783	3.434	0.00042	0.01803
RegionR8	1.706	3.434	0.11607	0.62928

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.29	3.434	1.00000	1.00000
RegenerationR2	0.783	3.434	0.27244	0.71807
RegenerationR3	2.006	3.434	0.01726	0.24007
RegenerationR4	2.056	3.434	0.02037	0.22591
RegenerationR5	0.233	3.434	0.77346	0.98015
RegenerationR6	0.126	3.434	0.87331	1.00000
RegenerationBL	0.317	3.434	0.67675	1.00000
RegenerationTP	0.106	3.434	0.89827	1.00000

Genes with expression patterns similar to MligTC455_48312

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48312	428	8.92	Mlig455_007192, Mlig455_007199, Mlig455_007261	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.366 Region-enriched R7: 2.783/0.01803	SVOP	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007192 {REF} {Length: 2307} {Pfam: Sugar (and other) transporter [PF00083.26, score=114.1]; Major Facilitator Superfamily [PF07690.18, score=97.1]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=306, Expect=3e-97]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=300, Expect=4e-95]} {Dmel: FBgn0034956, CG4324, [Score=253, Expect=5e-78]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=297, Expect=1e-94]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=331, Expect=3e-108]} {RNA1509_56107} {RNA1310_14131} {RNA815_5149} Mlig455_007199 {REF} {Length: 1857} {Pfam: Sugar (and other) transporter [PF00083.26, score=105.5]; Major Facilitator Superfamily [PF07690.18, score=85.8]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=215, Expect=2e-63]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=160, Expect=3e-43]} {Dmel: FBgn0034956, CG4324, [Score=193, Expect=6e-56]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=235, Expect=7e-72]} {Smed: dd_Smed_v6_17273_0_1, dd_Smed_v6_17273_0_1, [Score=232, Expect=3e-71]} {RNA1509_56107} {RNA1310_13789} {RNA815_5149} Mlig455_007261 {REF} {Length: 2309} {Pfam: Sugar (and other) transporter [PF00083.26, score=113.8]; Major Facilitator Superfamily [PF07690.18, score=97.1]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=303, Expect=4e-96]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=296, Expect=2e-93]} {Dmel: FBgn0034956, CG4324, [Score=259, Expect=3e-80]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=294, Expect=2e-93]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=335, Expect=6e-110]} {RNA1509_56107} {RNA1310_14131} {RNA815_5149}
2.	MligTC455_46402	134	2.8	Mlig455_014535, Mlig455_017644	Neo: - Age: -		1.768	-	-	-	-	0.968	0.800	Mlig455_014535 {REF} {Length: 597} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_50941.2} {RNA815_26807} Mlig455_017644 {REF} {Length: 266} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_109876} {RNA815_26807}
3.	MligTC455_48314	289	6.03	Mlig455_007191, Mlig455_007262	Neo: - Age: logFC(26M/2M)=-0.642	SVOP	1.76	-	-	-	-	0.807	0.953	Mlig455_007191 {REF} {Length: 2304} {Pfam: Sugar (and other) transporter [PF00083.26, score=60.9]; Major Facilitator Superfamily [PF07690.18, score=32.0]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=173, Expect=4e-49]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=163, Expect=1e-45]} {Dmel: FBgn0034956, CG4324, [Score=149, Expect=7e-41]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=171, Expect=7e-49]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=186, Expect=5e-55]} {RNA1509_56107} {RNA1310_13096} {RNA815_26584} Mlig455_007262 {REF} {Length: 2058} {Pfam: Sugar (and other) transporter [PF00083.26, score=115.4]; Major Facilitator Superfamily [PF07690.18, score=114.5]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=317, Expect=2e-101]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=311, Expect=3e-99]} {Dmel: FBgn0034956, CG4324, [Score=252, Expect=2e-77]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=301, Expect=3e-96]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=335, Expect=1e-109]} {RNA1509_56107} {RNA1310_12870} {RNA815_26584}
4.	MligTC455_18193	1385	28.85	Mlig455_045570	Neo: - Age: Down-Up-Down Region-enriched R2: 1.684/0.02988		1.732	-	-	-	0.780	-	0.952	Mlig455_045570 {REF} {Length: 1473} {RNA1509_4681} {RNA1310_27199} {RNA815_12209}
5.	MligTC455_31713	208	4.34	Mlig455_025223	Neo: - Age: logFC(26M/2M)=-0.450	WDR47	1.685	-	-	0.730	-	0.955	-	Mlig455_025223 {REF} {Length: 4883} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=82.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=43.1]} {Human: ENSG00000085433, WDR47, WD repeat domain 47, [RH, Score=303, Expect=1e-87]} {Mouse: ENSMUSG00000040389, Wdr47, WD repeat domain 47, [Score=310, Expect=5e-90]} {Dmel: FBgn0034931, CG2812, [RH, Score=276, Expect=4e-84]} {Celegans: WBGene00019434, nmtn-1, NeMiTiN (Neuronal enriched MAP interacting protein) homolog, [RH, Score=302, Expect=2e-87]} {Smed: dd_Smed_v6_3366_0_2, dd_Smed_v6_3366_0_2, [RH, Score=330, Expect=8e-98]} {RNA1509_17472} {RNA1310_5088, RNA1509_17472} {RNA1509_17472, RNA815_16728}
6.	MligTC455_40833	1043	21.73	Mlig455_000178	Neo: - Age: logFC(26M/2M)=-0.724		0.969	-	-	-	-	0.969	-	Mlig455_000178 {REF} {Length: 1419} {Smed: dd_Smed_v6_10173_0_1, dd_Smed_v6_10173_0_1, [Score=51.2, Expect=1e-07]} {RNA1509_23138} {RNA1310_23456.1} {RNA815_37333}
7.	MligTC455_40131	153	3.19	Mlig455_032564, Mlig455_032571, Mlig455_032631	Neo: - Age: logFC(26M/2M)=-0.354		0.963	-	-	-	-	0.963	-	Mlig455_032564 {REF} {Length: 2193} {tRNA: Val(CAC),pseudo, score=27.7} {Pfam: Tetraspanin family [PF00335.22, score=61.7]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=48.5, Expect=3e-06]} {RNA1509_40261} {RNA1310_24977.1} {RNA815_15736} Mlig455_032571 {REF} {Length: 2122} {Pfam: Tetraspanin family [PF00335.22, score=63.9]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=52.0, Expect=2e-07]} {Celegans: WBGene00006643, tsp-17, TetraSPanin family, [Score=48.5, Expect=2e-06]} {Smed: dd_Smed_v6_354_0_1, dd_Smed_v6_354_0_1, [Score=45.8, Expect=1e-05]} {RNA1509_40261, RNA1509_51045} {RNA1310_24977.1, RNA1509_40261, RNA1509_51045} {RNA1509_40261, RNA1509_51045, RNA815_15736} Mlig455_032631 {REF} {Length: 1910} {Pfam: Tetraspanin family [PF00335.22, score=62.2]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=49.3, Expect=2e-06]} {RNA1509_40261, RNA1509_40953} {RNA1310_24977.1, RNA1509_40953} {RNA1509_40953, RNA815_15736}
8.	MligTC455_51745	267	5.56	Mlig455_007920	Neo: - Age: -	FOXJ3	0.963	-	-	-	-	0.963	-	Mlig455_007920 {REF} {Length: 2476} {Pfam: Forkhead domain [PF00250.20, score=126.3]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [RH, Score=165, Expect=4e-46]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [RH, Score=164, Expect=5e-44]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=118, Expect=8e-29]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=115, Expect=3e-29]} {Smed: dd_Smed_v6_12170_0_1, dd_Smed_v6_12170_0_1, [RH, Score=112, Expect=2e-26]} {RNA1509_19637, RNA1509_37021, RNA1509_41082} {RNA1310_12207, RNA1509_37021, RNA1509_41082} {RNA1509_37021, RNA1509_41082, RNA815_17037}
9.	MligTC455_25322	530	11.05	Mlig455_016477	Neo: - Age: logFC(26M/2M)=-0.329		0.961	-	-	-	-	0.961	-	Mlig455_016477 {REF} {Length: 3328} {Dmel: FBgn0263076, Klp54D, Kinesin-like protein at 54D, [Score=85.5, Expect=9e-17]} {Smed: dd_Smed_v6_45970_0_1, dd_Smed_v6_45970_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_56505} {RNA1310_5922.1} {RNA815_12097}
10.	MligTC455_05720	156	3.26	Mlig455_040120	Neo: - Age: -	CHRNB3	0.959	-	-	-	-	0.959	-	Mlig455_040120 {REF} {Length: 1839} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=153.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=90.2]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=205, Expect=1e-59]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=204, Expect=4e-59]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=197, Expect=3e-56]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=197, Expect=3e-56]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=196, Expect=7e-56]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=206, Expect=5e-60]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=201, Expect=5e-58]; ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=197, Expect=4e-57]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=204, Expect=3e-59]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=201, Expect=5e-58]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [Score=364, Expect=8e-120]} {RNA1310_53963} {RNA815_48325}
11.	MligTC455_32582	524	10.91	Mlig455_010043	Neo: - Age: -	SH3GL1	0.959	-	-	-	-	0.959	-	Mlig455_010043 {REF} {Length: 4371} {Pfam: BAR domain [PF03114.20, score=223.0]; SH3 domain [PF00018.30, score=50.0]; Variant SH3 domain [PF14604.8, score=49.3]; Bin/amphiphysin/Rvs domain for vesicular trafficking [PF10455.11, score=48.7]; Variant SH3 domain [PF07653.19, score=45.4]} {Human: ENSG00000141985, SH3GL1, SH3 domain containing GRB2 like 1, endophilin A2, [RH, Score=348, Expect=4e-118]; ENSG00000140600, SH3GL3, SH3 domain containing GRB2 like 3, endophilin A3, [RH, Score=339, Expect=8e-115]} {Mouse: ENSMUSG00000003200, Sh3gl1, SH3-domain GRB2-like 1, [RH, Score=344, Expect=2e-116]} {Dmel: FBgn0038659, EndoA, Endophilin A, [RH, Score=76.6, Expect=3e-15]} {Celegans: WBGene00006791, unc-57, Endophilin-A homolog, [RH, Score=328, Expect=3e-110]} {Smed: dd_Smed_v6_6372_0_1, dd_Smed_v6_6372_0_1, [RH, Score=391, Expect=2e-135]} {RNA1509_53264} {RNA1310_24751} {RNA815_11391.1}
12.	MligTC455_19509	232	4.83	Mlig455_018973	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.427	HMCN1	0.958	-	-	-	-	0.958	-	Mlig455_018973 {REF} {Length: 4775} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=103.1]; Immunoglobulin domain [PF13927.8, score=98.9]; Immunoglobulin domain [PF13895.8, score=66.1]; Immunoglobulin domain [PF00047.27, score=49.7]; Immunoglobulin V-set domain [PF07686.19, score=40.7]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=95.9, Expect=1e-19]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=97.8, Expect=2e-20]} {Dmel: FBgn0284408, trol, terribly reduced optic lobes, [Score=76.6, Expect=4e-14]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=72.4, Expect=7e-13]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=86.3, Expect=2e-17]} {RNA1509_10174} {RNA1310_1561.1} {RNA815_4892}
13.	MligTC455_45191	1420	29.58	Mlig455_000192, Mlig455_058450, Mlig455_067701	Neo: - Age: - Regeneration-downregulated BL: -2.403 Regeneration-depleted BL: -2.403	BSG	0.953	-	-	-	-	0.953	-	Mlig455_000192 {REF} {Length: 2540} {Pfam: Immunoglobulin domain [PF13927.8, score=57.1]; Immunoglobulin I-set domain [PF07679.18, score=53.6]; Immunoglobulin domain [PF00047.27, score=36.0]; Immunoglobulin domain [PF13895.8, score=30.4]; Immunoglobulin V-set domain [PF07686.19, score=22.2]} {Human: ENSG00000172270, BSG, basigin (Ok blood group), [Score=67.8, Expect=1e-12]} {Mouse: ENSMUSG00000023175, Bsg, basigin, [Score=82.4, Expect=3e-17]} {Dmel: FBgn0261822, Bsg, Basigin, [RH, Score=61.6, Expect=1e-10]} {Celegans: WBGene00004729, sax-3, [Score=57.4, Expect=6e-09]} {Smed: dd_Smed_v6_1827_0_1, dd_Smed_v6_1827_0_1, [Score=81.6, Expect=9e-18]} {RNA1509_31454, RNA1509_47270} {RNA1310_8812, RNA1509_31454, RNA1509_47270} {RNA1509_31454, RNA1509_47270, RNA815_2422} Mlig455_058450 {REF} {Length: 3207} {Pfam: Immunoglobulin domain [PF13927.8, score=56.4]; Immunoglobulin I-set domain [PF07679.18, score=53.0]; Immunoglobulin domain [PF00047.27, score=36.1]; Immunoglobulin domain [PF13895.8, score=29.3]; Immunoglobulin V-set domain [PF07686.19, score=22.0]} {Human: ENSG00000172270, BSG, basigin (Ok blood group), [Score=67.4, Expect=2e-12]} {Mouse: ENSMUSG00000023175, Bsg, basigin, [Score=81.6, Expect=6e-17]} {Dmel: FBgn0261822, Bsg, Basigin, [RH, Score=62.4, Expect=6e-11]} {Celegans: WBGene00004729, sax-3, [Score=58.5, Expect=3e-09]} {Smed: dd_Smed_v6_1827_0_1, dd_Smed_v6_1827_0_1, [Score=80.5, Expect=3e-17]} {RNA1509_31454} {RNA1310_8812} {RNA815_2422} Mlig455_067701 {REF} {Length: 2864} {Celegans: WBGene00018026, F35A5.4, [Score=60.1, Expect=8e-11]} {RNA1509_47270} {RNA1310_8812} {RNA815_2422}
14.	MligTC455_17383	1327	27.64	Mlig455_022114, Mlig455_053650	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_022114 {REF} {Length: 3990} {Pfam: Domain of Unknown Function (DUF1542) [PF07564.13, score=21.5]} {RNA1509_4411} {RNA1310_4537.1, RNA1509_4411} {RNA1509_4411, RNA815_1371} Mlig455_053650 {REF} {Length: 4005} {Pfam: Domain of Unknown Function (DUF1542) [PF07564.13, score=21.5]} {RNA1509_4411, RNA1509_52435} {RNA1310_4537.1, RNA1509_52435} {RNA1509_52435, RNA815_1371}
15.	MligTC455_40938	28	0.57	Mlig455_002890	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.592	PRKAR2A	0.951	-	-	-	-	0.951	-	Mlig455_002890 {REF} {Length: 3559} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=61.4]} {Human: ENSG00000114302, PRKAR2A, protein kinase cAMP-dependent type II regulatory subunit alpha, [Score=53.5, Expect=8e-07]; ENSG00000185532, PRKG1, protein kinase cGMP-dependent 1, [Score=51.2, Expect=4e-06]} {Mouse: ENSMUSG00000032601, Prkar2a, protein kinase, cAMP dependent regulatory, type II alpha, [Score=53.1, Expect=8e-07]; ENSMUSG00000052920, Prkg1, protein kinase, cGMP-dependent, type I, [Score=51.2, Expect=5e-06]} {Smed: dd_Smed_v6_14355_0_1, dd_Smed_v6_14355_0_1, [Score=154, Expect=2e-39]} {RNA1509_30289} {RNA1310_5962} {RNA815_9809}
16.	MligTC455_31695	158	3.3	Mlig455_009775	Neo: - Age: Down-Up-Up Region-enriched R2: 3.086/0.01194		0.95	-	-	-	-	0.950	-	Mlig455_009775 {REF} {Length: 2186} {RNA1310_24838} {RNA815_18727}

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