M. lignano Tomo-Seq
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Results for MligTC455_48356

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48356 18274 380.70 Mlig455_008065

Neo: -

Age: -

 GABARAP Mlig455_008065 {REF} {Length: 1409} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=164.2]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=28.8]} {Human: ENSG00000170296, GABARAP, GABA type A receptor-associated protein, [RH, Score=224, Expect=2e-77]} {Mouse: ENSMUSG00000018567, Gabarap, gamma-aminobutyric acid receptor associated protein, [RH, Score=224, Expect=2e-77]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [RH, Score=223, Expect=5e-77]} {Celegans: WBGene00002980, lgg-1, [RH, Score=208, Expect=3e-71]} {Smed: dd_Smed_v6_600_0_1, dd_Smed_v6_600_0_1, [RH, Score=221, Expect=3e-76]} {RNA1509_15037, RNA1509_54166, RNA1509_54309} {RNA1310_36781, RNA1509_15037, RNA1509_54166, RNA1509_54309} {RNA1509_15037, RNA1509_54166, RNA1509_54309, RNA815_1689.1}

Cumulative graph for MligTC455_48356

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.381 8.637 0.00051 0.07476
RegionR2 -0.289 8.637 0.33452 0.72604
RegionR3 0.32 8.637 0.21105 0.75202
RegionR4 0.656 8.637 0.01872 0.09726
RegionR5 0.423 8.637 0.08786 0.27916
RegionR6 0.528 8.637 0.03545 0.35101
RegionR7 -0.008 8.637 0.97574 1.00000
RegionR8 -0.249 8.637 0.37687 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.168 8.637 0.71757 1.00000
RegenerationR2 -0.206 8.637 0.53647 0.88680
RegenerationR3 -0.672 8.637 0.04766 0.38040
RegenerationR4 -0.672 8.637 0.05039 0.36134
RegenerationR5 -0.58 8.637 0.08377 0.44732
RegenerationR6 -0.928 8.637 0.00619 0.09564
RegenerationBL -1.051 8.637 0.00059 0.01590
RegenerationTP -0.039 8.637 0.89849 1.00000


Genes with expression patterns similar to MligTC455_48356

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48356 18274 380.7 Mlig455_008065

Neo: -

Age: -

 GABARAP 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_008065 {REF} {Length: 1409} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=164.2]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=28.8]} {Human: ENSG00000170296, GABARAP, GABA type A receptor-associated protein, [RH, Score=224, Expect=2e-77]} {Mouse: ENSMUSG00000018567, Gabarap, gamma-aminobutyric acid receptor associated protein, [RH, Score=224, Expect=2e-77]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [RH, Score=223, Expect=5e-77]} {Celegans: WBGene00002980, lgg-1, [RH, Score=208, Expect=3e-71]} {Smed: dd_Smed_v6_600_0_1, dd_Smed_v6_600_0_1, [RH, Score=221, Expect=3e-76]} {RNA1509_15037, RNA1509_54166, RNA1509_54309} {RNA1310_36781, RNA1509_15037, RNA1509_54166, RNA1509_54309} {RNA1509_15037, RNA1509_54166, RNA1509_54309, RNA815_1689.1}
2. MligTC455_48355 18085 376.76 Mlig455_008031

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.282

 GABARAP 5.701 0.997 0.999 0.993 0.997 0.968 0.747 Mlig455_008031 {REF} {Length: 1001} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=163.6]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=28.5]} {Human: ENSG00000170296, GABARAP, GABA type A receptor-associated protein, [RH, Score=223, Expect=7e-77]; ENSG00000139112, GABARAPL1, GABA type A receptor associated protein like 1, [RH, Score=213, Expect=1e-72]} {Mouse: ENSMUSG00000018567, Gabarap, gamma-aminobutyric acid receptor associated protein, [RH, Score=223, Expect=5e-77]; ENSMUSG00000030161, Gabarapl1, gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1, [RH, Score=213, Expect=8e-73]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [RH, Score=221, Expect=2e-76]} {Celegans: WBGene00002980, lgg-1, [RH, Score=210, Expect=7e-72]} {Smed: dd_Smed_v6_600_0_1, dd_Smed_v6_600_0_1, [RH, Score=219, Expect=1e-75]} {RNA1509_1089, RNA1509_28641, RNA1509_3902} {RNA1310_36781, RNA1509_1089, RNA1509_28641, RNA1509_3902} {RNA1509_1089, RNA1509_28641, RNA1509_3902, RNA815_1689.2}
3. MligTC455_48354 9346 194.71 Mlig455_007928

Neo: -

Age: logFC(26M/2M)=-0.321

 GABARAP 3.702 0.994 0.988 0.800 - 0.920 - Mlig455_007928 {REF} {Length: 996} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=163.6]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=28.5]} {Human: ENSG00000170296, GABARAP, GABA type A receptor-associated protein, [RH, Score=223, Expect=7e-77]; ENSG00000139112, GABARAPL1, GABA type A receptor associated protein like 1, [RH, Score=213, Expect=1e-72]} {Mouse: ENSMUSG00000018567, Gabarap, gamma-aminobutyric acid receptor associated protein, [RH, Score=223, Expect=5e-77]; ENSMUSG00000030161, Gabarapl1, gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1, [RH, Score=213, Expect=8e-73]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [RH, Score=221, Expect=2e-76]} {Celegans: WBGene00002980, lgg-1, [RH, Score=210, Expect=7e-72]} {Smed: dd_Smed_v6_600_0_1, dd_Smed_v6_600_0_1, [RH, Score=219, Expect=1e-75]} {RNA1509_3984, RNA1509_5359} {RNA1310_36781, RNA1509_3984, RNA1509_5359} {RNA1509_3984, RNA1509_5359, RNA815_1689.2}

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