TomoSeq data search

Data search

Results for MligTC455_48419

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48419	1233	25.68	Mlig455_041496	Neo: - Age: Down-Down-Up	BBS2	Mlig455_041496 {REF} {Length: 2774} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, C-terminal [PF14782.8, score=373.9]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=114.3]; Ciliary BBSome complex subunit 2, N-terminal [PF14781.8, score=58.3]; FG-GAP-like repeat [PF13517.8, score=21.3]} {Human: ENSG00000125124, BBS2, Bardet-Biedl syndrome 2, [Score=478, Expect=2e-159]} {Mouse: ENSMUSG00000031755, Bbs2, Bardet-Biedl syndrome 2 (human), [Score=483, Expect=2e-161]} {Celegans: WBGene00000242, bbs-2, Bardet-Biedl syndrome 2 protein homolog, [Score=280, Expect=3e-84]} {Smed: dd_Smed_v6_10186_0_4, dd_Smed_v6_10186_0_4, [Score=433, Expect=2e-142]} {RNA1509_5656} {RNA1310_6860, RNA1509_5656} {RNA1509_5656, RNA815_2137}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48419

1233

25.68

Mlig455_041496

Neo: -

Age: Down-Down-Up

BBS2

Mlig455_041496 {REF} {Length: 2774} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, C-terminal [PF14782.8, score=373.9]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=114.3]; Ciliary BBSome complex subunit 2, N-terminal [PF14781.8, score=58.3]; FG-GAP-like repeat [PF13517.8, score=21.3]} {Human: ENSG00000125124, BBS2, Bardet-Biedl syndrome 2, [Score=478, Expect=2e-159]} {Mouse: ENSMUSG00000031755, Bbs2, Bardet-Biedl syndrome 2 (human), [Score=483, Expect=2e-161]} {Celegans: WBGene00000242, bbs-2, Bardet-Biedl syndrome 2 protein homolog, [Score=280, Expect=3e-84]} {Smed: dd_Smed_v6_10186_0_4, dd_Smed_v6_10186_0_4, [Score=433, Expect=2e-142]} {RNA1509_5656} {RNA1310_6860, RNA1509_5656} {RNA1509_5656, RNA815_2137}

Cumulative graph for MligTC455_48419

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.542	4.89	0.44849	1.00000
RegionR2	0.164	4.89	0.61373	0.96039
RegionR3	0.316	4.89	0.22259	0.76442
RegionR4	0.144	4.89	0.64188	0.94714
RegionR5	-0.302	4.89	0.23409	0.54240
RegionR6	0.085	4.89	0.75602	1.00000
RegionR7	-1.264	4.89	0.00483	0.10755
RegionR8	0.315	4.89	0.48503	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.76	4.89	0.03717	0.65473
RegenerationR2	-0.066	4.89	0.80055	0.99015
RegenerationR3	-0.02	4.89	0.94216	1.00000
RegenerationR4	0.126	4.89	0.67666	0.94447
RegenerationR5	0.364	4.89	0.19397	0.62562
RegenerationR6	0.197	4.89	0.50318	0.80840
RegenerationBL	0.516	4.89	0.15153	0.46514
RegenerationTP	-0.184	4.89	0.69281	1.00000

Genes with expression patterns similar to MligTC455_48419

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48419	1233	25.68	Mlig455_041496	Neo: - Age: Down-Down-Up	BBS2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041496 {REF} {Length: 2774} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, C-terminal [PF14782.8, score=373.9]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=114.3]; Ciliary BBSome complex subunit 2, N-terminal [PF14781.8, score=58.3]; FG-GAP-like repeat [PF13517.8, score=21.3]} {Human: ENSG00000125124, BBS2, Bardet-Biedl syndrome 2, [Score=478, Expect=2e-159]} {Mouse: ENSMUSG00000031755, Bbs2, Bardet-Biedl syndrome 2 (human), [Score=483, Expect=2e-161]} {Celegans: WBGene00000242, bbs-2, Bardet-Biedl syndrome 2 protein homolog, [Score=280, Expect=3e-84]} {Smed: dd_Smed_v6_10186_0_4, dd_Smed_v6_10186_0_4, [Score=433, Expect=2e-142]} {RNA1509_5656} {RNA1310_6860, RNA1509_5656} {RNA1509_5656, RNA815_2137}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts