TomoSeq data search

Data search

Results for MligTC455_48476

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48476

977

20.35

Mlig455_024346, Mlig455_024463

Neo: -

Age: Down-Up-Up

DCTN1

Mlig455_024346 {REF} {Length: 2549} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=53.1]} {Human: ENSG00000204843, DCTN1, dynactin subunit 1, [Score=47.8, Expect=8e-06]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=47.8, Expect=6e-06]} {Mouse: ENSMUSG00000031865, Dctn1, dynactin 1, [Score=48.1, Expect=2e-06]} {Smed: dd_Smed_v6_16405_0_1, dd_Smed_v6_16405_0_1, [RH, Score=128, Expect=2e-36]} {RNA1509_19333} {RNA1310_9913, RNA1509_19333} {RNA1509_19333, RNA815_10117.1}

Mlig455_024463 {REF} {Length: 2592} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=53.1]} {Human: ENSG00000204843, DCTN1, dynactin subunit 1, [Score=47.8, Expect=8e-06]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=47.8, Expect=6e-06]} {Mouse: ENSMUSG00000031865, Dctn1, dynactin 1, [Score=48.1, Expect=2e-06]} {Smed: dd_Smed_v6_16405_0_1, dd_Smed_v6_16405_0_1, [RH, Score=128, Expect=2e-36]} {RNA1509_19333} {RNA1310_9913} {RNA815_10117.1}

Cumulative graph for MligTC455_48476

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.698	4.587	0.41463	1.00000
RegionR2	0.613	4.587	0.11072	0.41122
RegionR3	0.013	4.587	0.96684	1.00000
RegionR4	0.097	4.587	0.80393	1.00000
RegionR5	-0.302	4.587	0.28666	0.61718
RegionR6	-0.396	4.587	0.21415	0.79256
RegionR7	-0.455	4.587	0.25612	0.88300
RegionR8	-0.268	4.587	0.56068	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.372	4.587	0.04721	0.68668
RegenerationR2	0.094	4.587	0.76474	0.97805
RegenerationR3	-0.405	4.587	0.29053	0.72213
RegenerationR4	-0.476	4.587	0.22878	0.67789
RegenerationR5	-0.197	4.587	0.58031	0.90077
RegenerationR6	-0.5	4.587	0.22666	0.57184
RegenerationBL	-0.458	4.587	0.39879	0.76761
RegenerationTP	0.168	4.587	0.73055	1.00000

Genes with expression patterns similar to MligTC455_48476

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48476	977	20.35	Mlig455_024346, Mlig455_024463	Neo: - Age: Down-Up-Up	DCTN1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024346 {REF} {Length: 2549} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=53.1]} {Human: ENSG00000204843, DCTN1, dynactin subunit 1, [Score=47.8, Expect=8e-06]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=47.8, Expect=6e-06]} {Mouse: ENSMUSG00000031865, Dctn1, dynactin 1, [Score=48.1, Expect=2e-06]} {Smed: dd_Smed_v6_16405_0_1, dd_Smed_v6_16405_0_1, [RH, Score=128, Expect=2e-36]} {RNA1509_19333} {RNA1310_9913, RNA1509_19333} {RNA1509_19333, RNA815_10117.1} Mlig455_024463 {REF} {Length: 2592} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=53.1]} {Human: ENSG00000204843, DCTN1, dynactin subunit 1, [Score=47.8, Expect=8e-06]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=47.8, Expect=6e-06]} {Mouse: ENSMUSG00000031865, Dctn1, dynactin 1, [Score=48.1, Expect=2e-06]} {Smed: dd_Smed_v6_16405_0_1, dd_Smed_v6_16405_0_1, [RH, Score=128, Expect=2e-36]} {RNA1509_19333} {RNA1310_9913} {RNA815_10117.1}
2.	MligTC455_26586	477	9.94	Mlig455_061635	Neo: - Age: - Region-enriched R2: 1.586/0.01809		3.255	-	-	0.953	0.820	0.734	0.748	Mlig455_061635 {REF} {Length: 3253} {RNA1509_19437} {RNA1310_10896, RNA1509_19437} {RNA1509_19437, RNA815_16416}
3.	MligTC455_19442	244	5.09	Mlig455_002080	Neo: - Age: logFC(26M/2M)=-0.526		1.88	-	-	0.908	0.972	-	-	Mlig455_002080 {REF} {Length: 2265} {Pfam: Aldehyde ferredoxin oxidoreductase, N-terminal domain [PF02730.17, score=18.6]} {RNA1509_40470} {RNA1310_22476.3} {RNA815_16128}
4.	MligTC455_17648	1703	35.48	Mlig455_047653	Neo: - Age: -	PPP3CA	1.733	-	-	-	0.783	-	0.950	Mlig455_047653 {REF} {Length: 4216} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=129.1]} {Human: ENSG00000138814, PPP3CA, protein phosphatase 3 catalytic subunit alpha, [RH, Score=824, Expect=0.0]; ENSG00000107758, PPP3CB, protein phosphatase 3 catalytic subunit beta, [RH, Score=810, Expect=0.0]; ENSG00000120910, PPP3CC, protein phosphatase 3 catalytic subunit gamma, [RH, Score=803, Expect=0.0]} {Mouse: ENSMUSG00000028161, Ppp3ca, protein phosphatase 3, catalytic subunit, alpha isoform, [RH, Score=823, Expect=0.0]; ENSMUSG00000021816, Ppp3cb, protein phosphatase 3, catalytic subunit, beta isoform, [RH, Score=810, Expect=0.0]; ENSMUSG00000022092, Ppp3cc, protein phosphatase 3, catalytic subunit, gamma isoform, [RH, Score=790, Expect=0.0]} {Dmel: FBgn0011826, Pp2B-14D, Protein phosphatase 2B at 14D, [RH, Score=820, Expect=0.0]} {Celegans: WBGene00006527, tax-6, Serine/threonine-protein phosphatase 2B catalytic subunit, [RH, Score=758, Expect=0.0]} {Smed: dd_Smed_v6_2045_0_1, dd_Smed_v6_2045_0_1, [RH, Score=670, Expect=0.0]} {RNA1509_3236} {RNA1310_3919.1} {RNA815_3119.1}
5.	MligTC455_42625	514	10.71	Mlig455_030550	Neo: - Age: logFC(26M/2M)=-0.257	FHAD1	1.709	-	-	0.962	0.747	-	-	Mlig455_030550 {REF} {Length: 4380} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=46.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=28.5]} {Human: ENSG00000142621, FHAD1, forkhead associated phosphopeptide binding domain 1, [Score=94.0, Expect=1e-18]} {Mouse: ENSMUSG00000051435, Fhad1, forkhead-associated (FHA) phosphopeptide binding domain 1, [Score=89.4, Expect=2e-17]; ENSMUSG00000116181, Fhad1, forkhead-associated (FHA) phosphopeptide binding domain 1, [Score=89.4, Expect=2e-17]} {Smed: dd_Smed_v6_14350_0_1, dd_Smed_v6_14350_0_1, [Score=122, Expect=1e-27]} {RNA1509_16296, RNA1509_55326} {RNA1310_9155.1, RNA1509_16296, RNA1509_55326} {RNA1509_16296, RNA1509_55326, RNA815_22370}
6.	MligTC455_04627	686	14.29	Mlig455_015426, Mlig455_032152	Neo: - Age: -	CDKL2	1.659	-	-	-	-	0.951	0.708	Mlig455_015426 {REF} {Length: 3264} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=247.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.8]; RIO1 family [PF01163.24, score=23.5]} {Human: ENSG00000138769, CDKL2, cyclin dependent kinase like 2, [Score=435, Expect=1e-145]} {Mouse: ENSMUSG00000029403, Cdkl2, cyclin-dependent kinase-like 2 (CDC2-related kinase), [Score=411, Expect=1e-136]} {Dmel: FBgn0031730, CG7236, [Score=335, Expect=4e-109]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=324, Expect=5e-106]} {Smed: dd_Smed_v6_17162_0_1, dd_Smed_v6_17162_0_1, [RH, Score=401, Expect=7e-136]} {RNA1509_10647} {RNA1310_9710} {RNA815_15568} Mlig455_032152 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=248.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=124.1]; RIO1 family [PF01163.24, score=23.5]} {Human: ENSG00000138769, CDKL2, cyclin dependent kinase like 2, [Score=430, Expect=8e-144]} {Mouse: ENSMUSG00000029403, Cdkl2, cyclin-dependent kinase-like 2 (CDC2-related kinase), [Score=409, Expect=5e-136]} {Dmel: FBgn0031730, CG7236, [Score=333, Expect=2e-108]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=322, Expect=2e-105]} {Smed: dd_Smed_v6_17162_0_1, dd_Smed_v6_17162_0_1, [RH, Score=400, Expect=1e-135]} {RNA1509_10647} {RNA1310_9710, RNA1509_10647} {RNA1509_10647, RNA815_8913}
7.	MligTC455_31475	136	2.84	Mlig455_026950	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_026950 {REF} {Length: 8284} {RNA1509_36736} {RNA1310_11858} {RNA815_8042}
8.	MligTC455_49175	947	19.74	Mlig455_027122	Neo: - Age: logFC(26M/2M)=-0.421		0.967	-	-	-	-	-	0.967	Mlig455_027122 {REF} {Length: 3132} {TRANSSPLICED} {Pfam: Fumarase C-terminus [PF05683.14, score=299.9]; Fumarate hydratase (Fumerase) [PF05681.16, score=291.7]} {Smed: dd_Smed_v6_2405_0_1, dd_Smed_v6_2405_0_1, [RH, Score=819, Expect=0.0]} {RNA1509_30796, RNA1509_31438, RNA1509_31510, RNA1509_42307, RNA1509_52616} {RNA1310_13870.1, RNA1509_30796, RNA1509_31438, RNA1509_31510, RNA1509_42307} {RNA1509_30796, RNA1509_31438, RNA1509_31510, RNA1509_42307, RNA815_4615}
9.	MligTC455_26547	167	3.47	Mlig455_026852	Neo: - Age: -	CSPP1	0.959	-	-	-	0.959	-	-	Mlig455_026852 {REF} {Length: 3986} {TRANSSPLICED} {Pfam: Mitochondrial ATPase inhibitor, IATP [PF04568.14, score=20.3]} {Human: ENSG00000104218, CSPP1, centrosome and spindle pole associated protein 1, [Score=82.8, Expect=3e-15]} {Mouse: ENSMUSG00000056763, Cspp1, centrosome and spindle pole associated protein 1, [Score=99.4, Expect=1e-20]} {Smed: dd_Smed_v6_13453_0_1, dd_Smed_v6_13453_0_1, [Score=87.8, Expect=2e-17]} {RNA1509_7480} {RNA1310_2740.1} {RNA815_13668}
10.	MligTC455_38260	1367	28.49	Mlig455_009738	Neo: - Age: Up-Down-Up	PPP1R3C	0.955	-	-	0.955	-	-	-	Mlig455_009738 {REF} {Length: 4566} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=82.5]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=52.2]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [RH, Score=119, Expect=1e-29]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [RH, Score=113, Expect=9e-28]; ENSMUSG00000067279, Ppp1r3c, protein phosphatase 1, regulatory subunit 3C, [RH, Score=112, Expect=3e-27]} {Dmel: FBgn0036428, Gbs-70E, Glycogen binding subunit 70E, [RH, Score=119, Expect=8e-30]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [RH, Score=129, Expect=3e-33]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [Score=95.5, Expect=6e-22]} {RNA1509_12260, RNA1509_12858, RNA1509_13033, RNA1509_29660, RNA1509_30645, RNA1509_30877, RNA1509_34866, RNA1509_59993, RNA1509_8451} {RNA1310_10970, RNA1509_12260, RNA1509_12858, RNA1509_13033, RNA1509_29660, RNA1509_30645, RNA1509_30877, RNA1509_34866, RNA1509_59993, RNA1509_8451} {RNA1509_12260, RNA1509_12858, RNA1509_13033, RNA1509_29660, RNA1509_30645, RNA1509_30877, RNA1509_34866, RNA1509_59993, RNA1509_8451, RNA815_1822}
11.	MligTC455_20741	1226	25.53	Mlig455_031347	Neo: - Age: -	RPS24	0.95	-	-	0.950	-	-	-	Mlig455_031347 {REF} {Length: 1920} {TRANSSPLICED} {Pfam: Ribosomal protein S24e [PF01282.21, score=67.8]; Ankyrin repeats (3 copies) [PF12796.9, score=37.1]; Ankyrin repeats (many copies) [PF13637.8, score=22.3]; Ankyrin repeats (many copies) [PF13857.8, score=19.2]} {Human: ENSG00000138326, RPS24, ribosomal protein S24, [RH, Score=90.1, Expect=2e-19]} {Mouse: ENSMUSG00000025290, Rps24, ribosomal protein S24, [RH, Score=84.3, Expect=5e-19]} {Dmel: FBgn0261596, RpS24, Ribosomal protein S24, [RH, Score=99.8, Expect=1e-24]} {Celegans: WBGene00004493, rps-24, Ribosomal Protein, Small subunit, [RH, Score=107, Expect=1e-27]} {Smed: dd_Smed_v6_164_0_1, dd_Smed_v6_164_0_1, [RH, Score=97.1, Expect=8e-24]} {RNA1509_18314} {RNA1310_15458} {RNA815_6508}

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